RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 TNRC6CQ9HCJ0 1690 aaKnown RBP25.01■■□□□ 1.59
CDHR3-210ENST00000474330 ANKRD31Q8N7Z5 1873 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 RIC1Q4ADV7 1423 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 AOX1Q06278 1338 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 ST5P78524 1137 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 C8orf34Q49A92 452 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 EAF2Q96CJ1 260 aaPredicted RBP25.01■■□□□ 1.59
CDHR3-210ENST00000474330 NLRP3Q96P20 1036 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 CHRNA5P30532 468 aa25■■□□□ 1.59
CDHR3-210ENST00000474330 LDHAL6AQ6ZMR3 332 aa25■■□□□ 1.59
CDHR3-210ENST00000474330 IFIT2P09913 472 aaKnown RBP24.99■■□□□ 1.59
CDHR3-210ENST00000474330 AACSQ86V21 672 aa24.99■■□□□ 1.59
CDHR3-210ENST00000474330 GPR108Q9NPR9 543 aa24.99■■□□□ 1.59
CDHR3-210ENST00000474330 TSHZ2Q9NRE2 1034 aa24.99■■□□□ 1.59
CDHR3-210ENST00000474330 RIPOR2Q9Y4F9 1068 aa24.99■■□□□ 1.59
CDHR3-210ENST00000474330 C3orf67Q6ZVT6 689 aa24.98■■□□□ 1.59
CDHR3-210ENST00000474330 SEC31BQ9NQW1 1179 aa24.98■■□□□ 1.59
CDHR3-210ENST00000474330 GSPT1P15170 499 aaKnown RBP24.97■■□□□ 1.59
CDHR3-210ENST00000474330 TNNI3KQ59H18 835 aa24.97■■□□□ 1.59
CDHR3-210ENST00000474330 CCDC24Q8N4L8 307 aa24.97■■□□□ 1.59
CDHR3-210ENST00000474330 FPGT-TNNI3KV9GXZ4 949 aa24.97■■□□□ 1.59
CDHR3-210ENST00000474330 TTC41PQ6P2S7 1318 aa24.97■■□□□ 1.59
CDHR3-210ENST00000474330 CEP126Q9P2H0 1117 aa24.97■■□□□ 1.59
CDHR3-210ENST00000474330 CDC5LQ99459 802 aaKnown RBP24.96■■□□□ 1.59
CDHR3-210ENST00000474330 CNNM1Q9NRU3 951 aa24.96■■□□□ 1.59
CDHR3-210ENST00000474330 ARFGEF1Q9Y6D6 1849 aa24.96■■□□□ 1.59
CDHR3-210ENST00000474330 DLEC1Q9Y238 1755 aa24.96■■□□□ 1.59
CDHR3-210ENST00000474330 CCDC8Q9H0W5 538 aaPredicted RBP24.95■■□□□ 1.58
CDHR3-210ENST00000474330 PIM2Q9P1W9 311 aa24.95■■□□□ 1.58
CDHR3-210ENST00000474330 BCS1LQ9Y276 419 aa24.95■■□□□ 1.58
CDHR3-210ENST00000474330 GPATCH3Q96I76 525 aa24.94■■□□□ 1.58
CDHR3-210ENST00000474330 ECHDC1Q9NTX5 307 aa24.94■■□□□ 1.58
CDHR3-210ENST00000474330 SPEF2Q9C093 1822 aa24.94■■□□□ 1.58
CDHR3-210ENST00000474330 IGHMBP2P38935 993 aaKnown RBP24.94■■□□□ 1.58
CDHR3-210ENST00000474330 TSHZ3Q63HK5 1081 aa24.94■■□□□ 1.58
CDHR3-210ENST00000474330 PI4K2BQ8TCG2 481 aa24.94■■□□□ 1.58
CDHR3-210ENST00000474330 MPHOSPH8Q99549 860 aa24.94■■□□□ 1.58
CDHR3-210ENST00000474330 AKAP2Q9Y2D5 859 aa24.93■■□□□ 1.58
CDHR3-210ENST00000474330 TAF1P21675 1872 aa24.93■■□□□ 1.58
CDHR3-210ENST00000474330 BRIP1Q9BX63 1249 aa24.92■■□□□ 1.58
CDHR3-210ENST00000474330 MROH5Q6ZUA9 1318 aa24.92■■□□□ 1.58
CDHR3-210ENST00000474330 ERC2O15083 957 aa24.91■■□□□ 1.58
CDHR3-210ENST00000474330 METTL24Q5JXM2 366 aa24.91■■□□□ 1.58
CDHR3-210ENST00000474330 TLR7Q9NYK1 1049 aaKnown RBP24.91■■□□□ 1.58
CDHR3-210ENST00000474330 DBNLQ9UJU6 430 aaKnown RBP24.91■■□□□ 1.58
CDHR3-210ENST00000474330 ZNF609O15014 1411 aa24.91■■□□□ 1.58
CDHR3-210ENST00000474330 GLRX3O76003 335 aaKnown RBP24.9■■□□□ 1.58
CDHR3-210ENST00000474330 SDSP20132 328 aa24.9■■□□□ 1.58
CDHR3-210ENST00000474330 ANKRD18AQ8IVF6 992 aa24.9■■□□□ 1.58
CDHR3-210ENST00000474330 VGLL2Q8N8G2 317 aa24.9■■□□□ 1.58
CDHR3-210ENST00000474330 COL11A2P13942 1736 aaPredicted RBP24.9■■□□□ 1.58
CDHR3-210ENST00000474330 DALRD3Q5D0E6 543 aaKnown RBP24.9■■□□□ 1.58
CDHR3-210ENST00000474330 C2CD5Q86YS7 1000 aa24.9■■□□□ 1.58
CDHR3-210ENST00000474330 COL4A1P02462 1669 aa24.89■■□□□ 1.58
CDHR3-210ENST00000474330 A0A1B0GUL7 405 aa24.89■■□□□ 1.57
CDHR3-210ENST00000474330 TIMM10P62072 90 aa24.89■■□□□ 1.57
CDHR3-210ENST00000474330 PDE8BO95263 885 aa24.88■■□□□ 1.57
CDHR3-210ENST00000474330 CRY2Q49AN0 593 aa24.88■■□□□ 1.57
CDHR3-210ENST00000474330 DDX46Q7L014 1031 aaKnown RBP24.88■■□□□ 1.57
CDHR3-210ENST00000474330 ZNF784Q8NCA9 323 aaPredicted RBP24.88■■□□□ 1.57
CDHR3-210ENST00000474330 DBNDD2Q9BQY9 259 aa24.88■■□□□ 1.57
CDHR3-210ENST00000474330 BSDC1Q9NW68 430 aaPredicted RBP24.88■■□□□ 1.57
CDHR3-210ENST00000474330 H0YIN7 160 aa24.87■■□□□ 1.57
CDHR3-210ENST00000474330 PDE6BP35913 854 aa24.87■■□□□ 1.57
CDHR3-210ENST00000474330 CELF1Q92879 486 aaKnown RBP24.87■■□□□ 1.57
CDHR3-210ENST00000474330 NEUROD6Q96NK8 337 aa24.87■■□□□ 1.57
CDHR3-210ENST00000474330 KLRG2A4D1S0 409 aaPredicted RBP24.86■■□□□ 1.57
CDHR3-210ENST00000474330 RPS8P62241 208 aaKnown RBP24.86■■□□□ 1.57
CDHR3-210ENST00000474330 CDC45O75419 566 aa24.86■■□□□ 1.57
CDHR3-210ENST00000474330 RPGRQ92834 1020 aaKnown RBP24.86■■□□□ 1.57
CDHR3-210ENST00000474330 ATP5JP18859 108 aa24.85■■□□□ 1.57
CDHR3-210ENST00000474330 ATP2B3Q16720 1220 aa24.85■■□□□ 1.57
CDHR3-210ENST00000474330 ARHGAP27Q6ZUM4 889 aa24.85■■□□□ 1.57
CDHR3-210ENST00000474330 AK9Q5TCS8 1911 aa24.85■■□□□ 1.57
CDHR3-210ENST00000474330 CACNA1SQ13698 1873 aa24.84■■□□□ 1.57
CDHR3-210ENST00000474330 A0A1B0GUL6 1792 aa24.84■■□□□ 1.57
CDHR3-210ENST00000474330 TRIM6-TRIM34B2RNG4 842 aa24.83■■□□□ 1.57
CDHR3-210ENST00000474330 CHRNDQ07001 517 aa24.83■■□□□ 1.57
CDHR3-210ENST00000474330 TTLL6Q8N841 843 aa24.83■■□□□ 1.57
CDHR3-210ENST00000474330 SRGNP10124 158 aa24.83■■□□□ 1.56
CDHR3-210ENST00000474330 FGFR2P21802 821 aa24.83■■□□□ 1.56
CDHR3-210ENST00000474330 GRAPQ13588 217 aa24.83■■□□□ 1.56
CDHR3-210ENST00000474330 PUM3Q15397 648 aaKnown RBP24.83■■□□□ 1.56
CDHR3-210ENST00000474330 GRAPLQ8TC17 118 aaPredicted RBP24.83■■□□□ 1.56
CDHR3-210ENST00000474330 XAGE2Q96GT9 111 aa24.83■■□□□ 1.56
CDHR3-210ENST00000474330 HOXA10P31260 410 aaPredicted RBP24.82■■□□□ 1.56
CDHR3-210ENST00000474330 TBC1D9Q6ZT07 1266 aa24.82■■□□□ 1.56
CDHR3-210ENST00000474330 CNTROBQ8N137 903 aa24.82■■□□□ 1.56
CDHR3-210ENST00000474330 HELBQ8NG08 1087 aaPredicted RBP24.82■■□□□ 1.56
CDHR3-210ENST00000474330 LPIN2Q92539 896 aa24.82■■□□□ 1.56
CDHR3-210ENST00000474330 RILPL2Q969X0 211 aa24.82■■□□□ 1.56
CDHR3-210ENST00000474330 MINPP1Q9UNW1 487 aa24.82■■□□□ 1.56
CDHR3-210ENST00000474330 SBF1O95248 1867 aa24.81■■□□□ 1.56
CDHR3-210ENST00000474330 ARAP2Q8WZ64 1704 aa24.81■■□□□ 1.56
CDHR3-210ENST00000474330 ZNF622Q969S3 477 aaKnown RBP eCLIP24.81■■□□□ 1.56
CDHR3-210ENST00000474330 RBM17Q96I25 401 aaKnown RBP24.81■■□□□ 1.56
CDHR3-210ENST00000474330 SLX4Q8IY92 1834 aa24.8■■□□□ 1.56
CDHR3-210ENST00000474330 SEC24BO95487 1268 aa24.8■■□□□ 1.56
CDHR3-210ENST00000474330 BOLA2Q9H3K6 86 aa24.8■■□□□ 1.56
CDHR3-210ENST00000474330 RBM19Q9Y4C8 960 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms