RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 CST9Q5W186 159 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 TBC1D16Q8TBP0 767 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 JARID2Q92833 1246 aaPredicted RBP14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 ZC3H12CQ9C0D7 883 aaKnown RBP14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 MRS2Q9HD23 443 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 ANKIB1Q9P2G1 1089 aa14.21□□□□□ -0.13
SEMA4D-216ENST00000474258 ECE2O60344 883 aa14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 ECE1P42892 770 aa14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 CTCFP49711 727 aaPredicted RBP14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 HIRAP54198 1017 aaPredicted RBP14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 ANKRD18AQ8IVF6 992 aa14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 WBP1LQ9NX94 342 aa14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 GGA1Q9UJY5 639 aa14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
SEMA4D-216ENST00000474258 G3V3G9 751 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 UFL1O94874 794 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 IGKV5-2P06315 115 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 RPS12P25398 132 aaKnown RBP14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 DCAF8Q5TAQ9 597 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 PAXIP1Q6ZW49 1069 aaPredicted RBP14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 CDC37L1Q7L3B6 337 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 TRPM4Q8TD43 1214 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 CCDC85AQ96PX6 553 aaPredicted RBP14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 GLIS2Q9BZE0 524 aaPredicted RBP14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 PRDM10Q9NQV6 1147 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 TLL2Q9Y6L7 1015 aa14.19□□□□□ -0.14
SEMA4D-216ENST00000474258 SHTN1A0MZ66 631 aa14.18□□□□□ -0.14
SEMA4D-216ENST00000474258 CELF2O95319 508 aaKnown RBP14.18□□□□□ -0.14
SEMA4D-216ENST00000474258 CTSWP56202 376 aa14.18□□□□□ -0.14
SEMA4D-216ENST00000474258 CAPNS2Q96L46 248 aa14.18□□□□□ -0.14
SEMA4D-216ENST00000474258 GPR101Q96P66 508 aaPredicted RBP14.18□□□□□ -0.14
SEMA4D-216ENST00000474258 CDC5LQ99459 802 aaKnown RBP14.18□□□□□ -0.14
SEMA4D-216ENST00000474258 KCNQ5Q9NR82 932 aa14.18□□□□□ -0.14
SEMA4D-216ENST00000474258 VIL1P09327 827 aaKnown RBP14.17□□□□□ -0.14
SEMA4D-216ENST00000474258 ATP2B4P23634 1241 aa14.17□□□□□ -0.14
SEMA4D-216ENST00000474258 CYP4F22Q6NT55 531 aa14.17□□□□□ -0.14
SEMA4D-216ENST00000474258 G2E3Q7L622 706 aa14.17□□□□□ -0.14
SEMA4D-216ENST00000474258 SAMD7Q7Z3H4 446 aa14.17□□□□□ -0.14
SEMA4D-216ENST00000474258 WDR63Q8IWG1 891 aa14.17□□□□□ -0.14
SEMA4D-216ENST00000474258 TTLL11Q8NHH1 800 aa14.17□□□□□ -0.14
SEMA4D-216ENST00000474258 RTL9Q8NET4 1388 aa14.17□□□□□ -0.14
SEMA4D-216ENST00000474258 XDHP47989 1333 aa14.16□□□□□ -0.14
SEMA4D-216ENST00000474258 THSD7BQ9C0I4 1608 aa14.16□□□□□ -0.14
SEMA4D-216ENST00000474258 NEURL1BA8MQ27 555 aa14.16□□□□□ -0.14
SEMA4D-216ENST00000474258 CAPN15O75808 1086 aa14.16□□□□□ -0.14
SEMA4D-216ENST00000474258 CWF19L2Q2TBE0 894 aaKnown RBP14.16□□□□□ -0.14
SEMA4D-216ENST00000474258 SAPCD2Q86UD0 394 aa14.16□□□□□ -0.14
SEMA4D-216ENST00000474258 H7C1W4 665 aa14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 LBX1P52954 281 aa14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 GRM1Q13255 1194 aa14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 TBC1D10BQ4KMP7 808 aaPredicted RBP14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 RBM26Q5T8P6 1007 aaKnown RBP14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 USP48Q86UV5 1035 aa14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 HHIPL1Q96JK4 782 aa14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 BEGAINQ9BUH8 593 aa14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 ZNF408Q9H9D4 720 aa14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 BSDC1Q9NW68 430 aaPredicted RBP14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 SALL2Q9Y467 1007 aaPredicted RBP14.15□□□□□ -0.14
SEMA4D-216ENST00000474258 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.15
SEMA4D-216ENST00000474258 VAMP4O75379 141 aa14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 MAP2K2P36507 400 aa14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 FLIIQ13045 1269 aa14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 FKBP5Q13451 457 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 UBE3BQ7Z3V4 1068 aa14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 AGBL3Q8NEM8 1001 aa14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 DCPSQ96C86 337 aaKnown RBP14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 MYH16Q9H6N6 1097 aa14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 GREM2Q9H772 168 aa14.14□□□□□ -0.15
SEMA4D-216ENST00000474258 EGFRP00533 1210 aa14.13□□□□□ -0.15
SEMA4D-216ENST00000474258 HSPA8P11142 646 aaKnown RBP14.13□□□□□ -0.15
SEMA4D-216ENST00000474258 GCKRQ14397 625 aa14.13□□□□□ -0.15
SEMA4D-216ENST00000474258 KIF4BQ2VIQ3 1234 aa14.13□□□□□ -0.15
SEMA4D-216ENST00000474258 KRT26Q7Z3Y9 468 aa14.13□□□□□ -0.15
SEMA4D-216ENST00000474258 PODNQ7Z5L7 613 aa14.13□□□□□ -0.15
SEMA4D-216ENST00000474258 DNAAF4Q8WXU2 420 aa14.13□□□□□ -0.15
SEMA4D-216ENST00000474258 MINPP1Q9UNW1 487 aa14.13□□□□□ -0.15
SEMA4D-216ENST00000474258 IGHMBP2P38935 993 aaKnown RBP14.12□□□□□ -0.15
SEMA4D-216ENST00000474258 EXOSC9Q06265 439 aaKnown RBP14.12□□□□□ -0.15
SEMA4D-216ENST00000474258 RSBN1LQ6PCB5 846 aaPredicted RBP14.12□□□□□ -0.15
SEMA4D-216ENST00000474258 LINS1Q8NG48 757 aa14.12□□□□□ -0.15
SEMA4D-216ENST00000474258 PLA2G12BQ9BX93 195 aa14.12□□□□□ -0.15
SEMA4D-216ENST00000474258 CASP8AP2Q9UKL3 1982 aa14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 USP17L3A6NCW0 530 aa14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 USP17L4A6NCW7 530 aa14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 ZNF609O15014 1411 aa14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 AOC2O75106 756 aa14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 CCT4P50991 539 aaKnown RBP14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 ZNF280AP59817 542 aaPredicted RBP14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 USP17L1Q7RTZ2 530 aa14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 AKAP11Q9UKA4 1901 aa14.11□□□□□ -0.15
SEMA4D-216ENST00000474258 MED23Q9ULK4 1368 aa14.1□□□□□ -0.15
SEMA4D-216ENST00000474258 ITGA6P23229 1130 aa14.1□□□□□ -0.15
SEMA4D-216ENST00000474258 CASP7P55210 303 aa14.1□□□□□ -0.15
SEMA4D-216ENST00000474258 SULF1Q8IWU6 871 aa14.1□□□□□ -0.15
SEMA4D-216ENST00000474258 MPHOSPH8Q99549 860 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms