RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 RPS12P25398 132 aaKnown RBP17.31■□□□□ 0.36
COPS7B-219ENST00000474042 CDC37L1Q7L3B6 337 aa17.31■□□□□ 0.36
COPS7B-219ENST00000474042 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
COPS7B-219ENST00000474042 RIMBP2O15034 1052 aa17.3■□□□□ 0.36
COPS7B-219ENST00000474042 AOC2O75106 756 aa17.3■□□□□ 0.36
COPS7B-219ENST00000474042 MAP2K2P36507 400 aa17.3■□□□□ 0.36
COPS7B-219ENST00000474042 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
COPS7B-219ENST00000474042 CWC25Q9NXE8 425 aaPredicted RBP17.3■□□□□ 0.36
COPS7B-219ENST00000474042 PDE8AO60658 829 aa17.29■□□□□ 0.36
COPS7B-219ENST00000474042 EGFRP00533 1210 aa17.29■□□□□ 0.36
COPS7B-219ENST00000474042 GRM1Q13255 1194 aa17.29■□□□□ 0.36
COPS7B-219ENST00000474042 DOK7Q18PE1 504 aa17.29■□□□□ 0.36
COPS7B-219ENST00000474042 CCDC152Q4G0S7 254 aa17.29■□□□□ 0.36
COPS7B-219ENST00000474042 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
COPS7B-219ENST00000474042 SAMD7Q7Z3H4 446 aa17.29■□□□□ 0.36
COPS7B-219ENST00000474042 UFL1O94874 794 aa17.28■□□□□ 0.36
COPS7B-219ENST00000474042 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
COPS7B-219ENST00000474042 TBC1D10BQ4KMP7 808 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-219ENST00000474042 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
COPS7B-219ENST00000474042 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
COPS7B-219ENST00000474042 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
COPS7B-219ENST00000474042 KCNQ5Q9NR82 932 aa17.28■□□□□ 0.36
COPS7B-219ENST00000474042 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.36
COPS7B-219ENST00000474042 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
COPS7B-219ENST00000474042 BEGAINQ9BUH8 593 aa17.27■□□□□ 0.36
COPS7B-219ENST00000474042 GGA1Q9UJY5 639 aa17.27■□□□□ 0.36
COPS7B-219ENST00000474042 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
COPS7B-219ENST00000474042 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-219ENST00000474042 CTSWP56202 376 aa17.26■□□□□ 0.35
COPS7B-219ENST00000474042 ZC3H12CQ9C0D7 883 aaKnown RBP17.26■□□□□ 0.35
COPS7B-219ENST00000474042 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
COPS7B-219ENST00000474042 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
COPS7B-219ENST00000474042 XDHP47989 1333 aa17.25■□□□□ 0.35
COPS7B-219ENST00000474042 CCDC27Q2M243 656 aa17.25■□□□□ 0.35
COPS7B-219ENST00000474042 KIF4BQ2VIQ3 1234 aa17.25■□□□□ 0.35
COPS7B-219ENST00000474042 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
COPS7B-219ENST00000474042 KRT26Q7Z3Y9 468 aa17.25■□□□□ 0.35
COPS7B-219ENST00000474042 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
COPS7B-219ENST00000474042 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
COPS7B-219ENST00000474042 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
COPS7B-219ENST00000474042 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
COPS7B-219ENST00000474042 CA12O43570 354 aa17.24■□□□□ 0.35
COPS7B-219ENST00000474042 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
COPS7B-219ENST00000474042 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
COPS7B-219ENST00000474042 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
COPS7B-219ENST00000474042 ABHD8Q96I13 439 aa17.24■□□□□ 0.35
COPS7B-219ENST00000474042 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
COPS7B-219ENST00000474042 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
COPS7B-219ENST00000474042 HUNKP57058 714 aa17.23■□□□□ 0.35
COPS7B-219ENST00000474042 ZNF280AP59817 542 aaPredicted RBP17.23■□□□□ 0.35
COPS7B-219ENST00000474042 NOGQ13253 232 aa17.23■□□□□ 0.35
COPS7B-219ENST00000474042 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
COPS7B-219ENST00000474042 GGA3Q9NZ52 723 aa17.23■□□□□ 0.35
COPS7B-219ENST00000474042 TSKSQ9UJT2 592 aa17.23■□□□□ 0.35
COPS7B-219ENST00000474042 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
COPS7B-219ENST00000474042 IL16Q14005 1332 aa17.22■□□□□ 0.35
COPS7B-219ENST00000474042 CASP8AP2Q9UKL3 1982 aa17.22■□□□□ 0.35
COPS7B-219ENST00000474042 RSBN1LQ6PCB5 846 aaPredicted RBP17.22■□□□□ 0.35
COPS7B-219ENST00000474042 WWC1Q8IX03 1113 aa17.22■□□□□ 0.35
COPS7B-219ENST00000474042 AGBL3Q8NEM8 1001 aa17.22■□□□□ 0.35
COPS7B-219ENST00000474042 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
COPS7B-219ENST00000474042 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
COPS7B-219ENST00000474042 GMLQ99445 158 aa17.22■□□□□ 0.35
COPS7B-219ENST00000474042 CDC5LQ99459 802 aaKnown RBP17.22■□□□□ 0.35
COPS7B-219ENST00000474042 GBA2Q9HCG7 927 aaPredicted RBP17.22■□□□□ 0.35
COPS7B-219ENST00000474042 MED23Q9ULK4 1368 aa17.22■□□□□ 0.35
COPS7B-219ENST00000474042 PAPPA2Q9BXP8 1791 aa17.22■□□□□ 0.35
COPS7B-219ENST00000474042 NEURL1BA8MQ27 555 aa17.21■□□□□ 0.35
COPS7B-219ENST00000474042 FAM155AB1AL88 458 aaPredicted RBP17.21■□□□□ 0.35
COPS7B-219ENST00000474042 ATP2B4P23634 1241 aa17.21■□□□□ 0.35
COPS7B-219ENST00000474042 RBM26Q5T8P6 1007 aaKnown RBP17.21■□□□□ 0.35
COPS7B-219ENST00000474042 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
COPS7B-219ENST00000474042 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.34
COPS7B-219ENST00000474042 G3V3G9 751 aa17.2■□□□□ 0.34
COPS7B-219ENST00000474042 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
COPS7B-219ENST00000474042 CWF19L2Q2TBE0 894 aaKnown RBP17.2■□□□□ 0.34
COPS7B-219ENST00000474042 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
COPS7B-219ENST00000474042 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
COPS7B-219ENST00000474042 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
COPS7B-219ENST00000474042 G2E3Q7L622 706 aa17.2■□□□□ 0.34
COPS7B-219ENST00000474042 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
COPS7B-219ENST00000474042 GREM2Q9H772 168 aa17.2■□□□□ 0.34
COPS7B-219ENST00000474042 BSDC1Q9NW68 430 aaPredicted RBP17.2■□□□□ 0.34
COPS7B-219ENST00000474042 RGMBQ6NW40 437 aa17.19■□□□□ 0.34
COPS7B-219ENST00000474042 PODNQ7Z5L7 613 aa17.19■□□□□ 0.34
COPS7B-219ENST00000474042 SULF1Q8IWU6 871 aa17.19■□□□□ 0.34
COPS7B-219ENST00000474042 C2orf69Q8N8R5 385 aa17.19■□□□□ 0.34
COPS7B-219ENST00000474042 MINPP1Q9UNW1 487 aa17.19■□□□□ 0.34
COPS7B-219ENST00000474042 AKAP11Q9UKA4 1901 aa17.19■□□□□ 0.34
COPS7B-219ENST00000474042 H7C1W4 665 aa17.18■□□□□ 0.34
COPS7B-219ENST00000474042 UBE3BQ7Z3V4 1068 aa17.18■□□□□ 0.34
COPS7B-219ENST00000474042 PITPNM2Q9BZ72 1349 aa17.18■□□□□ 0.34
COPS7B-219ENST00000474042 USP17L3A6NCW0 530 aa17.17■□□□□ 0.34
COPS7B-219ENST00000474042 USP17L4A6NCW7 530 aa17.17■□□□□ 0.34
COPS7B-219ENST00000474042 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
COPS7B-219ENST00000474042 ANGEL2Q5VTE6 544 aaKnown RBP17.17■□□□□ 0.34
COPS7B-219ENST00000474042 USP17L1Q7RTZ2 530 aa17.17■□□□□ 0.34
COPS7B-219ENST00000474042 CDCA5Q96FF9 252 aa17.17■□□□□ 0.34
COPS7B-219ENST00000474042 PLA2G12BQ9BX93 195 aa17.17■□□□□ 0.34
COPS7B-219ENST00000474042 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms