RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
SSBP1-209ENST00000473783 H0YGN5 161 aa14.03□□□□□ -0.16
SSBP1-209ENST00000473783 MYL6BP14649 208 aa14.03□□□□□ -0.16
SSBP1-209ENST00000473783 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
SSBP1-209ENST00000473783 EYA3Q99504 573 aa14.03□□□□□ -0.16
SSBP1-209ENST00000473783 TMEM106CQ9BVX2 250 aa14.03□□□□□ -0.16
SSBP1-209ENST00000473783 KCNQ5Q9NR82 932 aa14.03□□□□□ -0.16
SSBP1-209ENST00000473783 RIMBP2O15034 1052 aa14.02□□□□□ -0.17
SSBP1-209ENST00000473783 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
SSBP1-209ENST00000473783 TCIRG1Q13488 830 aa14.02□□□□□ -0.17
SSBP1-209ENST00000473783 TTLL12Q14166 644 aaPredicted RBP14.02□□□□□ -0.17
SSBP1-209ENST00000473783 TAF7Q15545 349 aaPredicted RBP14.02□□□□□ -0.17
SSBP1-209ENST00000473783 AGBL3Q8NEM8 1001 aa14.02□□□□□ -0.17
SSBP1-209ENST00000473783 ERO1AQ96HE7 468 aa14.02□□□□□ -0.17
SSBP1-209ENST00000473783 NSFL1CQ9UNZ2 370 aaKnown RBP14.02□□□□□ -0.17
SSBP1-209ENST00000473783 ERBB4Q15303 1308 aa14.01□□□□□ -0.17
SSBP1-209ENST00000473783 C6orf229H3BNL8 230 aa14.01□□□□□ -0.17
SSBP1-209ENST00000473783 HTATSF1O43719 755 aaKnown RBP14.01□□□□□ -0.17
SSBP1-209ENST00000473783 NF2P35240 595 aa14.01□□□□□ -0.17
SSBP1-209ENST00000473783 MKRN3Q13064 507 aaKnown RBP14.01□□□□□ -0.17
SSBP1-209ENST00000473783 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
SSBP1-209ENST00000473783 RSPH6AQ9H0K4 717 aa14.01□□□□□ -0.17
SSBP1-209ENST00000473783 HCLS1P14317 486 aaPredicted RBP14□□□□□ -0.17
SSBP1-209ENST00000473783 INHBEP58166 350 aa14□□□□□ -0.17
SSBP1-209ENST00000473783 EIF4G2P78344 907 aaKnown RBP eCLIP14□□□□□ -0.17
SSBP1-209ENST00000473783 DOK7Q18PE1 504 aa14□□□□□ -0.17
SSBP1-209ENST00000473783 POLLQ9UGP5 575 aa14□□□□□ -0.17
SSBP1-209ENST00000473783 MANSC4A6NHS7 340 aaPredicted RBP13.99□□□□□ -0.17
SSBP1-209ENST00000473783 DCTN1Q14203 1278 aa13.99□□□□□ -0.17
SSBP1-209ENST00000473783 SPRYD7Q5W111 196 aa13.99□□□□□ -0.17
SSBP1-209ENST00000473783 ZNF333Q96JL9 665 aa13.99□□□□□ -0.17
SSBP1-209ENST00000473783 MYOZ2Q9NPC6 264 aa13.99□□□□□ -0.17
SSBP1-209ENST00000473783 RBM27Q9P2N5 1060 aaKnown RBP13.99□□□□□ -0.17
SSBP1-209ENST00000473783 TIMELESSQ9UNS1 1208 aa13.99□□□□□ -0.17
SSBP1-209ENST00000473783 SH3TC1Q8TE82 1336 aa13.98□□□□□ -0.17
SSBP1-209ENST00000473783 USP17L8P0C7I0 530 aa13.98□□□□□ -0.17
SSBP1-209ENST00000473783 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
SSBP1-209ENST00000473783 RSBN1LQ6PCB5 846 aaPredicted RBP13.98□□□□□ -0.17
SSBP1-209ENST00000473783 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
SSBP1-209ENST00000473783 IFNL1Q8IU54 200 aa13.98□□□□□ -0.17
SSBP1-209ENST00000473783 PNISRQ8TF01 805 aaKnown RBP13.98□□□□□ -0.17
SSBP1-209ENST00000473783 EFCC1Q9HA90 598 aa13.98□□□□□ -0.17
SSBP1-209ENST00000473783 GPSM2P81274 684 aa13.97□□□□□ -0.17
SSBP1-209ENST00000473783 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
SSBP1-209ENST00000473783 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
SSBP1-209ENST00000473783 PRAMEF18Q5VWM3 479 aa13.97□□□□□ -0.17
SSBP1-209ENST00000473783 ARMC9Q7Z3E5 817 aa13.97□□□□□ -0.17
SSBP1-209ENST00000473783 NLRP10Q86W26 655 aa13.97□□□□□ -0.17
SSBP1-209ENST00000473783 CD99L2Q8TCZ2 262 aa13.97□□□□□ -0.17
SSBP1-209ENST00000473783 ZC3H12CQ9C0D7 883 aaKnown RBP13.97□□□□□ -0.17
SSBP1-209ENST00000473783 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
SSBP1-209ENST00000473783 DLG5Q8TDM6 1919 aa13.96□□□□□ -0.17
SSBP1-209ENST00000473783 G3V3G9 751 aa13.96□□□□□ -0.17
SSBP1-209ENST00000473783 EIF4A1P60842 406 aaKnown RBP13.96□□□□□ -0.17
SSBP1-209ENST00000473783 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
SSBP1-209ENST00000473783 NBPF11Q86T75 865 aa13.96□□□□□ -0.17
SSBP1-209ENST00000473783 TBC1D16Q8TBP0 767 aa13.96□□□□□ -0.17
SSBP1-209ENST00000473783 GMLQ99445 158 aa13.96□□□□□ -0.17
SSBP1-209ENST00000473783 TRMT112Q9UI30 125 aaKnown RBP13.96□□□□□ -0.17
SSBP1-209ENST00000473783 ZBTB48P10074 688 aaPredicted RBP13.95□□□□□ -0.18
SSBP1-209ENST00000473783 CC2D1BQ5T0F9 858 aaKnown RBP13.95□□□□□ -0.18
SSBP1-209ENST00000473783 LDLRAD1Q5T700 205 aa13.95□□□□□ -0.18
SSBP1-209ENST00000473783 LRP10Q7Z4F1 713 aa13.95□□□□□ -0.18
SSBP1-209ENST00000473783 CELF1Q92879 486 aaKnown RBP13.95□□□□□ -0.18
SSBP1-209ENST00000473783 SCAF8Q9UPN6 1271 aaKnown RBP13.95□□□□□ -0.18
SSBP1-209ENST00000473783 IGF2BP3O00425 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
SSBP1-209ENST00000473783 SLC4A8Q2Y0W8 1093 aa13.94□□□□□ -0.18
SSBP1-209ENST00000473783 SLC9C1Q4G0N8 1177 aa13.94□□□□□ -0.18
SSBP1-209ENST00000473783 PRO3102Q9H379 93 aa13.94□□□□□ -0.18
SSBP1-209ENST00000473783 PODXL2Q9NZ53 605 aa13.94□□□□□ -0.18
SSBP1-209ENST00000473783 LAMA3Q16787 3333 aa13.94□□□□□ -0.18
SSBP1-209ENST00000473783 ZNF646O15015 1829 aaPredicted RBP13.93□□□□□ -0.18
SSBP1-209ENST00000473783 PER1O15534 1290 aaPredicted RBP13.93□□□□□ -0.18
SSBP1-209ENST00000473783 SP3Q02447 781 aa13.93□□□□□ -0.18
SSBP1-209ENST00000473783 SF3B3Q15393 1217 aaKnown RBP13.93□□□□□ -0.18
SSBP1-209ENST00000473783 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
SSBP1-209ENST00000473783 COL4A1P02462 1669 aa13.93□□□□□ -0.18
SSBP1-209ENST00000473783 A0A1W2PPC1 479 aa13.92□□□□□ -0.18
SSBP1-209ENST00000473783 CRHR2Q13324 411 aa13.92□□□□□ -0.18
SSBP1-209ENST00000473783 ARHGEF6Q15052 776 aa13.92□□□□□ -0.18
SSBP1-209ENST00000473783 OTUD7BQ6GQQ9 843 aa13.92□□□□□ -0.18
SSBP1-209ENST00000473783 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
SSBP1-209ENST00000473783 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
SSBP1-209ENST00000473783 UFL1O94874 794 aa13.91□□□□□ -0.18
SSBP1-209ENST00000473783 PDIA6Q15084 440 aa13.91□□□□□ -0.18
SSBP1-209ENST00000473783 SLC10A4Q96EP9 437 aa13.91□□□□□ -0.18
SSBP1-209ENST00000473783 THUMPD2Q9BTF0 503 aaKnown RBP13.91□□□□□ -0.18
SSBP1-209ENST00000473783 ANGEL1Q9UNK9 670 aaKnown RBP13.91□□□□□ -0.18
SSBP1-209ENST00000473783 COL1A1P02452 1464 aaPredicted RBP13.91□□□□□ -0.18
SSBP1-209ENST00000473783 USP17L3A6NCW0 530 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 USP17L4A6NCW7 530 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 WNT10BO00744 389 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
SSBP1-209ENST00000473783 PRKG1Q13976 671 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 USP17L1Q7RTZ2 530 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 APOBEC3FQ8IUX4 373 aaKnown RBP13.9□□□□□ -0.18
SSBP1-209ENST00000473783 OGFOD1Q8N543 542 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 DPF3Q92784 378 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 WNK4Q96J92 1243 aa13.9□□□□□ -0.18
SSBP1-209ENST00000473783 GGA1Q9UJY5 639 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms