RNA–Protein interactions for RNA: ENST00000473657.1

PHACTR3-207, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2

Gene PHACTR3, Length 2,408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-207ENST00000473657 HELLSQ9NRZ9 838 aa10.77□□□□□ -0.68
PHACTR3-207ENST00000473657 TRMT112Q9UI30 125 aaKnown RBP10.77□□□□□ -0.68
PHACTR3-207ENST00000473657 FSD2A1L4K1 749 aa10.77□□□□□ -0.69
PHACTR3-207ENST00000473657 PSMA5P28066 241 aa10.77□□□□□ -0.69
PHACTR3-207ENST00000473657 ZMYM1Q5SVZ6 1142 aa10.77□□□□□ -0.69
PHACTR3-207ENST00000473657 XAGE2Q96GT9 111 aa10.77□□□□□ -0.69
PHACTR3-207ENST00000473657 ARXQ96QS3 562 aa10.77□□□□□ -0.69
PHACTR3-207ENST00000473657 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
PHACTR3-207ENST00000473657 AKAP11Q9UKA4 1901 aa10.77□□□□□ -0.69
PHACTR3-207ENST00000473657 ANKRD18BA2A2Z9 1011 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 UBAP1LF5GYI3 381 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 GOLIM4O00461 696 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 IFIT1P09914 478 aaKnown RBP10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 ZNF512BQ96KM6 892 aaPredicted RBP10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 ZSCAN31Q96LW9 406 aaPredicted RBP10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 CCDC9Q9Y3X0 531 aaKnown RBP10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 CHGBP05060 677 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 CPA1P15085 419 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 KCNJ4P48050 445 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 PARP10Q53GL7 1025 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 TAF7LQ5H9L4 462 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 MYH7P12883 1935 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 RTL9Q8NET4 1388 aa10.76□□□□□ -0.69
PHACTR3-207ENST00000473657 NHSQ6T4R5 1651 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 RGL2O15211 777 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 KCNQ2O43526 872 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 ADORA1P30542 326 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 KRT32Q14532 448 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 KLHL40Q2TBA0 621 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 CCDC158Q5M9N0 1113 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 SUSD4Q5VX71 490 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 CCDC85AQ96PX6 553 aaPredicted RBP10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 SEC62Q99442 399 aaKnown RBP10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 LMBRD1Q9NUN5 540 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 TAF6LQ9Y6J9 622 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 SPATA31A6Q5VVP1 1343 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 LDHAL6AQ6ZMR3 332 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 DSCC1Q9BVC3 393 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 SCN7AQ01118 1682 aa10.75□□□□□ -0.69
PHACTR3-207ENST00000473657 RNF113AO15541 343 aaKnown RBP10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 LARGE1O95461 756 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 RPS6KB1P23443 525 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 ST3GAL1Q11201 340 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 ATP2B3Q16720 1220 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 CCDC129Q6ZRS4 1044 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 ISY1Q9ULR0 285 aaKnown RBP10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 BTAF1O14981 1849 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 LAMA4Q16363 1823 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 NTSR2O95665 410 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 COL9A3Q14050 684 aaPredicted RBP10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 ANKRD1Q15327 319 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 METTL24Q5JXM2 366 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 BLOC1S2Q6QNY1 142 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 NGLY1Q96IV0 654 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 C8orf37Q96NL8 207 aa10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 UTP14AQ9BVJ6 771 aaKnown RBP10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 WDR33Q9C0J8 1336 aaKnown RBP10.74□□□□□ -0.69
PHACTR3-207ENST00000473657 PDE8BO95263 885 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 ZFYP08048 801 aaPredicted RBP10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 CYP21A2P08686 494 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 CLEC4GQ6UXB4 293 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 MAST3O60307 1309 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 CNTNAP4Q9C0A0 1308 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 FGFR2P21802 821 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 SCARF1Q14162 830 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 ME3Q16798 604 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 LRRFIP1Q32MZ4 808 aaKnown RBP10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 L1TD1Q5T7N2 865 aaKnown RBP10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 MROH5Q6ZUA9 1318 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 GZF1Q9H116 711 aaPredicted RBP10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 TPCN1Q9ULQ1 816 aa10.73□□□□□ -0.69
PHACTR3-207ENST00000473657 HSP90B1P14625 803 aaKnown RBP10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 TOB2Q14106 344 aaPredicted RBP10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 GORABQ5T7V8 394 aa10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 LINC00116Q8NCU8 138 aa10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 CNNM1Q9NRU3 951 aa10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 CASZ1Q86V15 1759 aa10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 ATRNO75882 1429 aa10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 SLFNL1Q499Z3 407 aa10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 LARP6Q9BRS8 491 aaKnown RBP10.72□□□□□ -0.69
PHACTR3-207ENST00000473657 LY75O60449 1722 aa10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 COL24A1Q17RW2 1714 aa10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 GOLGA6L3A6NEY3 463 aa10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 HSPD1P10809 573 aaKnown RBP10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 ARID4AP29374 1257 aaPredicted RBP10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 OSBP2Q969R2 916 aa10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 SMC3Q9UQE7 1217 aa10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 ZNF652Q9Y2D9 606 aa10.71□□□□□ -0.69
PHACTR3-207ENST00000473657 DOCK2Q92608 1830 aa10.71□□□□□ -0.7
PHACTR3-207ENST00000473657 A0A1B0GUL6 1792 aa10.71□□□□□ -0.7
PHACTR3-207ENST00000473657 A0A0G2JS52 829 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms