RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 FGD1P98174 961 aa18.06■□□□□ 0.48
LMNA-213ENST00000473598 TFCP2Q12800 502 aa18.06■□□□□ 0.48
LMNA-213ENST00000473598 CCDC152Q4G0S7 254 aa18.06■□□□□ 0.48
LMNA-213ENST00000473598 LRRC24Q50LG9 513 aa18.06■□□□□ 0.48
LMNA-213ENST00000473598 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
LMNA-213ENST00000473598 GSPT1P15170 499 aaKnown RBP18.05■□□□□ 0.48
LMNA-213ENST00000473598 PUS3Q9BZE2 481 aaKnown RBP18.05■□□□□ 0.48
LMNA-213ENST00000473598 PPP1R1BQ9UD71 204 aaPredicted RBP18.05■□□□□ 0.48
LMNA-213ENST00000473598 PARP3Q9Y6F1 533 aa18.05■□□□□ 0.48
LMNA-213ENST00000473598 AOX1Q06278 1338 aa18.05■□□□□ 0.48
LMNA-213ENST00000473598 AACSQ86V21 672 aa18.05■□□□□ 0.48
LMNA-213ENST00000473598 KLHL34Q8N239 644 aa18.05■□□□□ 0.48
LMNA-213ENST00000473598 EAF2Q96CJ1 260 aaPredicted RBP18.05■□□□□ 0.48
LMNA-213ENST00000473598 IFIT2P09913 472 aaKnown RBP18.04■□□□□ 0.48
LMNA-213ENST00000473598 CLCN1P35523 988 aa18.04■□□□□ 0.48
LMNA-213ENST00000473598 SF3B3Q15393 1217 aaKnown RBP18.04■□□□□ 0.48
LMNA-213ENST00000473598 CCDC24Q8N4L8 307 aa18.04■□□□□ 0.48
LMNA-213ENST00000473598 SEC24BO95487 1268 aa18.03■□□□□ 0.48
LMNA-213ENST00000473598 TNRC6CQ9HCJ0 1690 aaKnown RBP18.03■□□□□ 0.48
LMNA-213ENST00000473598 TAF1P21675 1872 aa18.03■□□□□ 0.48
LMNA-213ENST00000473598 SERPINB2P05120 415 aa18.03■□□□□ 0.48
LMNA-213ENST00000473598 TNNI3KQ59H18 835 aa18.03■□□□□ 0.48
LMNA-213ENST00000473598 TSHZ3Q63HK5 1081 aa18.03■□□□□ 0.48
LMNA-213ENST00000473598 LDHAL6AQ6ZMR3 332 aa18.03■□□□□ 0.48
LMNA-213ENST00000473598 FPGT-TNNI3KV9GXZ4 949 aa18.03■□□□□ 0.48
LMNA-213ENST00000473598 TTC41PQ6P2S7 1318 aa18.02■□□□□ 0.48
LMNA-213ENST00000473598 AK9Q5TCS8 1911 aa18.02■□□□□ 0.48
LMNA-213ENST00000473598 C3orf67Q6ZVT6 689 aa18.02■□□□□ 0.48
LMNA-213ENST00000473598 CNBD1Q8NA66 436 aa18.02■□□□□ 0.48
LMNA-213ENST00000473598 NLRP3Q96P20 1036 aa18.02■□□□□ 0.48
LMNA-213ENST00000473598 FHDC1Q9C0D6 1143 aaPredicted RBP18.02■□□□□ 0.48
LMNA-213ENST00000473598 GPR108Q9NPR9 543 aa18.02■□□□□ 0.48
LMNA-213ENST00000473598 SEC31BQ9NQW1 1179 aa18.02■□□□□ 0.48
LMNA-213ENST00000473598 RIPOR2Q9Y4F9 1068 aa18.02■□□□□ 0.48
LMNA-213ENST00000473598 NPHP1O15259 732 aa18.01■□□□□ 0.47
LMNA-213ENST00000473598 CCDC8Q9H0W5 538 aaPredicted RBP18.01■□□□□ 0.47
LMNA-213ENST00000473598 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
LMNA-213ENST00000473598 PI4K2BQ8TCG2 481 aa18.01■□□□□ 0.47
LMNA-213ENST00000473598 CNNM1Q9NRU3 951 aa18.01■□□□□ 0.47
LMNA-213ENST00000473598 CEP126Q9P2H0 1117 aa18.01■□□□□ 0.47
LMNA-213ENST00000473598 RIC1Q4ADV7 1423 aa18■□□□□ 0.47
LMNA-213ENST00000473598 PRR5LQ6MZQ0 368 aa18■□□□□ 0.47
LMNA-213ENST00000473598 GPATCH3Q96I76 525 aa18■□□□□ 0.47
LMNA-213ENST00000473598 ECHDC1Q9NTX5 307 aa18■□□□□ 0.47
LMNA-213ENST00000473598 COL4A1P02462 1669 aa18■□□□□ 0.47
LMNA-213ENST00000473598 TLR7Q9NYK1 1049 aaKnown RBP17.99■□□□□ 0.47
LMNA-213ENST00000473598 SDSP20132 328 aa17.99■□□□□ 0.47
LMNA-213ENST00000473598 CDC5LQ99459 802 aaKnown RBP17.99■□□□□ 0.47
LMNA-213ENST00000473598 ZNF609O15014 1411 aa17.99■□□□□ 0.47
LMNA-213ENST00000473598 A0A1B0GUL6 1792 aa17.98■□□□□ 0.47
LMNA-213ENST00000473598 ERC2O15083 957 aa17.98■□□□□ 0.47
LMNA-213ENST00000473598 IGHMBP2P38935 993 aaKnown RBP17.98■□□□□ 0.47
LMNA-213ENST00000473598 NLGN2Q8NFZ4 835 aa17.98■□□□□ 0.47
LMNA-213ENST00000473598 MPHOSPH8Q99549 860 aa17.98■□□□□ 0.47
LMNA-213ENST00000473598 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
LMNA-213ENST00000473598 GLRX3O76003 335 aaKnown RBP17.98■□□□□ 0.47
LMNA-213ENST00000473598 ST5P78524 1137 aa17.98■□□□□ 0.47
LMNA-213ENST00000473598 METTL24Q5JXM2 366 aa17.98■□□□□ 0.47
LMNA-213ENST00000473598 DBNLQ9UJU6 430 aaKnown RBP17.98■□□□□ 0.47
LMNA-213ENST00000473598 MROH5Q6ZUA9 1318 aa17.97■□□□□ 0.47
LMNA-213ENST00000473598 SYT17Q9BSW7 474 aa17.97■□□□□ 0.47
LMNA-213ENST00000473598 AKAP2Q9Y2D5 859 aa17.97■□□□□ 0.47
LMNA-213ENST00000473598 VGLL2Q8N8G2 317 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 ANKRD31Q8N7Z5 1873 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 A0A1B0GUL7 405 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 CDC45O75419 566 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 TIMM10P62072 90 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 PDE4CQ08493 712 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 ANKRD18AQ8IVF6 992 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 NEUROD6Q96NK8 337 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 DBNDD2Q9BQY9 259 aa17.96■□□□□ 0.47
LMNA-213ENST00000473598 FRAT2O75474 233 aaPredicted RBP17.95■□□□□ 0.46
LMNA-213ENST00000473598 PDCL3Q9H2J4 239 aa17.95■□□□□ 0.46
LMNA-213ENST00000473598 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
LMNA-213ENST00000473598 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
LMNA-213ENST00000473598 A0A0U1RQG5 324 aaPredicted RBP17.94■□□□□ 0.46
LMNA-213ENST00000473598 TRIM6-TRIM34B2RNG4 842 aa17.94■□□□□ 0.46
LMNA-213ENST00000473598 PDE8BO95263 885 aa17.94■□□□□ 0.46
LMNA-213ENST00000473598 UPF2Q9HAU5 1272 aaKnown RBP17.94■□□□□ 0.46
LMNA-213ENST00000473598 KIF13BQ9NQT8 1826 aa17.94■□□□□ 0.46
LMNA-213ENST00000473598 TBC1D9Q6ZT07 1266 aa17.94■□□□□ 0.46
LMNA-213ENST00000473598 CELF1Q92879 486 aaKnown RBP17.94■□□□□ 0.46
LMNA-213ENST00000473598 BSDC1Q9NW68 430 aaPredicted RBP17.94■□□□□ 0.46
LMNA-213ENST00000473598 CD2APQ9Y5K6 639 aa17.94■□□□□ 0.46
LMNA-213ENST00000473598 ATP5JP18859 108 aa17.93■□□□□ 0.46
LMNA-213ENST00000473598 DDX46Q7L014 1031 aaKnown RBP17.93■□□□□ 0.46
LMNA-213ENST00000473598 RILPL2Q969X0 211 aa17.93■□□□□ 0.46
LMNA-213ENST00000473598 ATP2B3Q16720 1220 aa17.93■□□□□ 0.46
LMNA-213ENST00000473598 CRY2Q49AN0 593 aa17.93■□□□□ 0.46
LMNA-213ENST00000473598 TBC1D32Q96NH3 1257 aa17.93■□□□□ 0.46
LMNA-213ENST00000473598 PRDM4Q9UKN5 801 aa17.93■□□□□ 0.46
LMNA-213ENST00000473598 KIAA1551Q9HCM1 1747 aa17.92■□□□□ 0.46
LMNA-213ENST00000473598 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
LMNA-213ENST00000473598 MAP4K4O95819 1239 aaPredicted RBP17.92■□□□□ 0.46
LMNA-213ENST00000473598 TPM2P07951 284 aa17.92■□□□□ 0.46
LMNA-213ENST00000473598 CHRNA5P30532 468 aa17.92■□□□□ 0.46
LMNA-213ENST00000473598 RPS8P62241 208 aaKnown RBP17.92■□□□□ 0.46
LMNA-213ENST00000473598 CNTROBQ8N137 903 aa17.92■□□□□ 0.46
LMNA-213ENST00000473598 CHRNDQ07001 517 aa17.91■□□□□ 0.46
LMNA-213ENST00000473598 XAGE2Q96GT9 111 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms