RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 GALNT6Q8NCL4 622 aa11.48□□□□□ -0.57
A1CF-209ENST00000473480 NEDD1Q8NHV4 660 aa11.48□□□□□ -0.57
A1CF-209ENST00000473480 IFT43Q96FT9 208 aa11.48□□□□□ -0.57
A1CF-209ENST00000473480 DNMT3AQ9Y6K1 912 aaPredicted RBP11.48□□□□□ -0.57
A1CF-209ENST00000473480 CEP170BQ9Y4F5 1589 aaPredicted RBP11.48□□□□□ -0.57
A1CF-209ENST00000473480 ZMYM3Q14202 1370 aa11.47□□□□□ -0.57
A1CF-209ENST00000473480 NEURL1BA8MQ27 555 aa11.47□□□□□ -0.57
A1CF-209ENST00000473480 EPB42P16452 691 aa11.47□□□□□ -0.57
A1CF-209ENST00000473480 NEUROD1Q13562 356 aa11.47□□□□□ -0.57
A1CF-209ENST00000473480 EDARADDQ8WWZ3 215 aa11.47□□□□□ -0.57
A1CF-209ENST00000473480 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.57
A1CF-209ENST00000473480 REREQ9P2R6 1566 aa11.46□□□□□ -0.57
A1CF-209ENST00000473480 MICAL2O94851 1124 aa11.46□□□□□ -0.57
A1CF-209ENST00000473480 IDH3AP50213 366 aa11.46□□□□□ -0.57
A1CF-209ENST00000473480 NAA30Q147X3 362 aaPredicted RBP11.46□□□□□ -0.57
A1CF-209ENST00000473480 GRIN2CQ14957 1233 aa11.46□□□□□ -0.57
A1CF-209ENST00000473480 ZNF772Q68DY9 489 aaPredicted RBP11.46□□□□□ -0.57
A1CF-209ENST00000473480 CAPN12Q6ZSI9 719 aa11.46□□□□□ -0.57
A1CF-209ENST00000473480 SLC30A3Q99726 388 aa11.46□□□□□ -0.57
A1CF-209ENST00000473480 SAP130Q9H0E3 1048 aa11.46□□□□□ -0.57
A1CF-209ENST00000473480 USTQ9Y2C2 406 aa11.46□□□□□ -0.57
A1CF-209ENST00000473480 MYO3AQ8NEV4 1616 aa11.46□□□□□ -0.58
A1CF-209ENST00000473480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.45□□□□□ -0.58
A1CF-209ENST00000473480 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
A1CF-209ENST00000473480 INPP5BP32019 993 aa11.45□□□□□ -0.58
A1CF-209ENST00000473480 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
A1CF-209ENST00000473480 PCBP4P57723 403 aaKnown RBP11.45□□□□□ -0.58
A1CF-209ENST00000473480 C1orf229Q6ZS94 237 aaPredicted RBP11.45□□□□□ -0.58
A1CF-209ENST00000473480 SYT9Q86SS6 491 aa11.45□□□□□ -0.58
A1CF-209ENST00000473480 KLF15Q9UIH9 416 aa11.45□□□□□ -0.58
A1CF-209ENST00000473480 VWDEQ8N2E2 1590 aa11.45□□□□□ -0.58
A1CF-209ENST00000473480 MROH2AA6NES4 1674 aa11.44□□□□□ -0.58
A1CF-209ENST00000473480 EPXP11678 715 aa11.44□□□□□ -0.58
A1CF-209ENST00000473480 BRD2P25440 801 aaKnown RBP11.44□□□□□ -0.58
A1CF-209ENST00000473480 SSFA2P28290 1259 aa11.44□□□□□ -0.58
A1CF-209ENST00000473480 RXRBP28702 533 aa11.44□□□□□ -0.58
A1CF-209ENST00000473480 ARSDP51689 593 aa11.44□□□□□ -0.58
A1CF-209ENST00000473480 ZNF518AQ6AHZ1 1483 aa11.44□□□□□ -0.58
A1CF-209ENST00000473480 CTTNBP2Q8WZ74 1663 aa11.43□□□□□ -0.58
A1CF-209ENST00000473480 SHISA8B8ZZ34 492 aa11.43□□□□□ -0.58
A1CF-209ENST00000473480 EFCC1Q9HA90 598 aa11.43□□□□□ -0.58
A1CF-209ENST00000473480 POLR1AO95602 1720 aaPredicted RBP11.43□□□□□ -0.58
A1CF-209ENST00000473480 DIP2CQ9Y2E4 1556 aa11.42□□□□□ -0.58
A1CF-209ENST00000473480 SIN3BO75182 1162 aa11.42□□□□□ -0.58
A1CF-209ENST00000473480 FCHSD1Q86WN1 690 aa11.42□□□□□ -0.58
A1CF-209ENST00000473480 TREML1Q86YW5 311 aa11.42□□□□□ -0.58
A1CF-209ENST00000473480 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
A1CF-209ENST00000473480 SCARF2Q96GP6 870 aaPredicted RBP11.41□□□□□ -0.58
A1CF-209ENST00000473480 C11orf16Q9NQ32 467 aa11.41□□□□□ -0.58
A1CF-209ENST00000473480 FAM135BQ49AJ0 1406 aa11.41□□□□□ -0.58
A1CF-209ENST00000473480 NEURL4Q96JN8 1562 aa11.41□□□□□ -0.58
A1CF-209ENST00000473480 RAPGEF6Q8TEU7 1601 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 CARNS1A5YM72 827 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 RNF225M0QZC1 329 aaPredicted RBP11.4□□□□□ -0.58
A1CF-209ENST00000473480 AMPD1P23109 780 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 EFCAB2Q5VUJ9 269 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 RAB44Q7Z6P3 723 aaPredicted RBP11.4□□□□□ -0.58
A1CF-209ENST00000473480 ANKLE2Q86XL3 938 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 ETFBKMTQ8IXQ9 262 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 SEPT3Q9UH03 358 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 PLCH2O75038 1416 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 SETBP1Q9Y6X0 1596 aa11.4□□□□□ -0.58
A1CF-209ENST00000473480 TNFRSF10BO14763 440 aa11.39□□□□□ -0.59
A1CF-209ENST00000473480 CCINQ13939 588 aa11.39□□□□□ -0.59
A1CF-209ENST00000473480 PODNQ7Z5L7 613 aa11.39□□□□□ -0.59
A1CF-209ENST00000473480 BHMTQ93088 406 aa11.39□□□□□ -0.59
A1CF-209ENST00000473480 GSX2Q9BZM3 304 aa11.39□□□□□ -0.59
A1CF-209ENST00000473480 STIM2Q9P246 746 aa11.39□□□□□ -0.59
A1CF-209ENST00000473480 DNMT1P26358 1616 aaKnown RBP11.38□□□□□ -0.59
A1CF-209ENST00000473480 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
A1CF-209ENST00000473480 CDK12Q9NYV4 1490 aaPredicted RBP11.38□□□□□ -0.59
A1CF-209ENST00000473480 OPLAHO14841 1288 aa11.38□□□□□ -0.59
A1CF-209ENST00000473480 PDE4CQ08493 712 aa11.38□□□□□ -0.59
A1CF-209ENST00000473480 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
A1CF-209ENST00000473480 TNFRSF25Q93038 417 aa11.38□□□□□ -0.59
A1CF-209ENST00000473480 BTBD6Q96KE9 485 aa11.38□□□□□ -0.59
A1CF-209ENST00000473480 PNMA5Q96PV4 448 aa11.38□□□□□ -0.59
A1CF-209ENST00000473480 SYNMO15061 1565 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 KDM5CP41229 1560 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 ELOA3CA0A087WX78 387 aaPredicted RBP11.37□□□□□ -0.59
A1CF-209ENST00000473480 ELOA3DA6NLF2 546 aaPredicted RBP11.37□□□□□ -0.59
A1CF-209ENST00000473480 ADARB2-AS1A8MUL3 147 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 ALAS2P22557 587 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 GRNP28799 593 aaKnown RBP11.37□□□□□ -0.59
A1CF-209ENST00000473480 ELOA3BQ3SY89 546 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 MEX3CQ5U5Q3 659 aaKnown RBP11.37□□□□□ -0.59
A1CF-209ENST00000473480 BEND7Q8N7W2 519 aaPredicted RBP11.37□□□□□ -0.59
A1CF-209ENST00000473480 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 ELOA3Q8NG57 546 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 RRAGCQ9HB90 399 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 MTMR7Q9Y216 660 aa11.37□□□□□ -0.59
A1CF-209ENST00000473480 RTCBQ9Y3I0 505 aaKnown RBP11.37□□□□□ -0.59
A1CF-209ENST00000473480 RGL4Q8IZJ4 473 aa11.36□□□□□ -0.59
A1CF-209ENST00000473480 RETREG2Q8NC44 543 aa11.36□□□□□ -0.59
A1CF-209ENST00000473480 FAM13BQ9NYF5 915 aa11.36□□□□□ -0.59
A1CF-209ENST00000473480 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
A1CF-209ENST00000473480 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
A1CF-209ENST00000473480 SCNN1AP37088 669 aa11.35□□□□□ -0.59
A1CF-209ENST00000473480 PHLDB3Q6NSJ2 640 aa11.35□□□□□ -0.59
A1CF-209ENST00000473480 CHSY3Q70JA7 882 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms