RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 CYP46A1Q9Y6A2 500 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 PRPF40AO75400 957 aaKnown RBP13.15□□□□□ -0.3
NMD3-206ENST00000472947 CIAO1O76071 339 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
NMD3-206ENST00000472947 NCLP19338 710 aaKnown RBP13.15□□□□□ -0.3
NMD3-206ENST00000472947 ZNF34Q8IZ26 560 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 CDCA7Q9BWT1 371 aaPredicted RBP13.15□□□□□ -0.3
NMD3-206ENST00000472947 PLA2G12BQ9BX93 195 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 SEC31BQ9NQW1 1179 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 CNNM1Q9NRU3 951 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 RIPOR2Q9Y4F9 1068 aa13.15□□□□□ -0.3
NMD3-206ENST00000472947 ME3Q16798 604 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 KCNB2Q92953 911 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 LRRC2Q9BYS8 371 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 TPCN1Q9ULQ1 816 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 TCHHQ07283 1943 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 TTC39AQ5SRH9 613 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 LMBRD1Q9NUN5 540 aa13.14□□□□□ -0.31
NMD3-206ENST00000472947 NSFL1CQ9UNZ2 370 aaKnown RBP13.14□□□□□ -0.31
NMD3-206ENST00000472947 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
NMD3-206ENST00000472947 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 ZAP70P43403 619 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 STK3Q13188 491 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 ANKRD18BA2A2Z9 1011 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 M0R2C6 588 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 BRD1O95696 1058 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 CLEC17AQ6ZS10 378 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
NMD3-206ENST00000472947 INTS4Q96HW7 963 aaKnown RBP13.13□□□□□ -0.31
NMD3-206ENST00000472947 RPAP1Q9BWH6 1393 aaPredicted RBP13.12□□□□□ -0.31
NMD3-206ENST00000472947 CDHR2Q9BYE9 1310 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 MYH3P11055 1940 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 ERVV-1B6SEH8 477 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 PDE8AO60658 829 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 CYP21A2P08686 494 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 BICDL1Q6ZP65 573 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
NMD3-206ENST00000472947 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
NMD3-206ENST00000472947 STOX1Q6ZVD7 989 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 OSBP2Q969R2 916 aa13.12□□□□□ -0.31
NMD3-206ENST00000472947 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
NMD3-206ENST00000472947 MAST3O60307 1309 aa13.11□□□□□ -0.31
NMD3-206ENST00000472947 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
NMD3-206ENST00000472947 CCDC158Q5M9N0 1113 aa13.11□□□□□ -0.31
NMD3-206ENST00000472947 BLOC1S2Q6QNY1 142 aa13.11□□□□□ -0.31
NMD3-206ENST00000472947 CCDC24Q8N4L8 307 aa13.11□□□□□ -0.31
NMD3-206ENST00000472947 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
NMD3-206ENST00000472947 GOLGA6L22H0YM25 854 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 MCAMP43121 646 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 TOB2Q14106 344 aaPredicted RBP13.1□□□□□ -0.31
NMD3-206ENST00000472947 CHST3Q7LGC8 479 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 GPT2Q8TD30 523 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 TM6SF1Q9BZW5 370 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 TAF1P21675 1872 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 GOLGA6L3A6NEY3 463 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 XRCC6P12956 609 aaKnown RBP eCLIP13.1□□□□□ -0.31
NMD3-206ENST00000472947 RPS6KB1P23443 525 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 PHKA1P46020 1223 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
NMD3-206ENST00000472947 C3orf67Q6ZVT6 689 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 VGLL2Q8N8G2 317 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 JCADQ9P266 1359 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 COL4A1P02462 1669 aa13.1□□□□□ -0.31
NMD3-206ENST00000472947 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
NMD3-206ENST00000472947 SYT1P21579 422 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 GJB2P29033 226 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 RNF20Q5VTR2 975 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 UTP14AQ9BVJ6 771 aaKnown RBP13.09□□□□□ -0.31
NMD3-206ENST00000472947 USP21Q9UK80 565 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 SMC3Q9UQE7 1217 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 SH3TC1Q8TE82 1336 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 FSD2A1L4K1 749 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
NMD3-206ENST00000472947 HAND2P61296 217 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
NMD3-206ENST00000472947 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
NMD3-206ENST00000472947 VPS72Q15906 364 aa13.08□□□□□ -0.32
NMD3-206ENST00000472947 FOXP2O15409 715 aa13.08□□□□□ -0.32
NMD3-206ENST00000472947 PDE8BO95263 885 aa13.08□□□□□ -0.32
NMD3-206ENST00000472947 NEK1Q96PY6 1258 aa13.08□□□□□ -0.32
NMD3-206ENST00000472947 SRP68Q9UHB9 627 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms