RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 LARGE2Q8N3Y3 721 aa5.27□□□□□ -1.57
XRN1-209ENST00000472625 RHBDD1Q8TEB9 315 aa5.27□□□□□ -1.57
XRN1-209ENST00000472625 SETD5Q9C0A6 1442 aa5.27□□□□□ -1.57
XRN1-209ENST00000472625 ADGRL3Q9HAR2 1447 aa5.27□□□□□ -1.57
XRN1-209ENST00000472625 ZMIZ1Q9ULJ6 1067 aa5.27□□□□□ -1.57
XRN1-209ENST00000472625 ASXL1Q8IXJ9 1541 aa5.27□□□□□ -1.57
XRN1-209ENST00000472625 CNTNAP5Q8WYK1 1306 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 SRCAPQ6ZRS2 3230 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 PRAG1Q86YV5 1406 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 CHD2O14647 1828 aaKnown RBP5.26□□□□□ -1.57
XRN1-209ENST00000472625 A0A1B0GTH6 734 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 SFI1A8K8P3 1242 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 RNF225M0QZC1 329 aaPredicted RBP5.26□□□□□ -1.57
XRN1-209ENST00000472625 CDK2AP1O14519 115 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 RXRBP28702 533 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 LMOD1P29536 600 aaPredicted RBP5.26□□□□□ -1.57
XRN1-209ENST00000472625 ZNF326Q5BKZ1 582 aaKnown RBP5.26□□□□□ -1.57
XRN1-209ENST00000472625 CCDC102BQ68D86 513 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 TNS4Q8IZW8 715 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 TPCN2Q8NHX9 752 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 LRRC59Q96AG4 307 aaKnown RBP5.26□□□□□ -1.57
XRN1-209ENST00000472625 ABHD17AQ96GS6 310 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 GMCL1Q96IK5 515 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 AMOTL2Q9Y2J4 779 aa5.26□□□□□ -1.57
XRN1-209ENST00000472625 ACIN1Q9UKV3 1341 aaKnown RBP5.25□□□□□ -1.57
XRN1-209ENST00000472625 E9PCH4 1651 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L15C9J2P7 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L10C9JJH3 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L13C9JLJ4 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L12C9JPN9 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L11C9JVI0 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L21D6R901 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L18D6R9N7 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L22D6RA61 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L17D6RBQ6 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L19D6RCP7 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L20D6RJB6 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 M0R2N6 131 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 BCRP11274 1271 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 USP17L24Q0WX57 530 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 TBCELQ5QJ74 424 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 BRINP3Q76B58 766 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 TSEN2Q8NCE0 465 aaKnown RBP5.25□□□□□ -1.57
XRN1-209ENST00000472625 NEDD1Q8NHV4 660 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 NGLY1Q96IV0 654 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 ZNF594Q96JF6 807 aaPredicted RBP5.25□□□□□ -1.57
XRN1-209ENST00000472625 NDFIP2Q9NV92 336 aa5.25□□□□□ -1.57
XRN1-209ENST00000472625 XRN1Q8IZH2 1706 aaKnown RBP5.25□□□□□ -1.57
XRN1-209ENST00000472625 RPGRIP1LQ68CZ1 1315 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 HFM1A2PYH4 1435 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 MST1RQ04912 1400 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 LRP6O75581 1613 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.24□□□□□ -1.57
XRN1-209ENST00000472625 FAM196BA6NMK8 535 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 EML1O00423 815 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 CSB-PGBD3P0DP91 1061 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 TXLNAP40222 546 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 GPAT2Q6NUI2 795 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 C1orf229Q6ZS94 237 aaPredicted RBP5.24□□□□□ -1.57
XRN1-209ENST00000472625 TRIM50Q86XT4 487 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 PGBD3Q8N328 593 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 GAS2L2Q8NHY3 880 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 AIDAQ96BJ3 306 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 TSPAN10Q9H1Z9 355 aaPredicted RBP5.24□□□□□ -1.57
XRN1-209ENST00000472625 CRISPLD1Q9H336 500 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 PARP3Q9Y6F1 533 aa5.24□□□□□ -1.57
XRN1-209ENST00000472625 LRPPRCP42704 1394 aaKnown RBP5.24□□□□□ -1.57
XRN1-209ENST00000472625 CFAP65Q6ZU64 1925 aaKnown RBP5.24□□□□□ -1.57
XRN1-209ENST00000472625 SPHKAPQ2M3C7 1700 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.23□□□□□ -1.57
XRN1-209ENST00000472625 SHISA8B8ZZ34 492 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 C2CD2LO14523 706 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 RBM6P78332 1123 aaKnown RBP5.23□□□□□ -1.57
XRN1-209ENST00000472625 TEAD4Q15561 434 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 XP32Q5T750 250 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 SLC9A9Q8IVB4 645 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 TIMELESSQ9UNS1 1208 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 ATAD2Q6PL18 1390 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 NHSL1Q5SYE7 1610 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 AFF2P51816 1311 aa5.23□□□□□ -1.57
XRN1-209ENST00000472625 PNPLA6Q8IY17 1366 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 DCDC2BA2VCK2 349 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 BNIP3LO60238 219 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 LGR5O75473 907 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 RASA1P20936 1047 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 ATP1A2P50993 1020 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 HIRAP54198 1017 aaPredicted RBP5.22□□□□□ -1.57
XRN1-209ENST00000472625 CTBSQ01459 385 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 PSME1Q06323 249 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 DPYDQ12882 1025 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 CDCA8Q53HL2 280 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 EFHC2Q5JST6 749 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 SCARF2Q96GP6 870 aaPredicted RBP5.22□□□□□ -1.57
XRN1-209ENST00000472625 OXCT2Q9BYC2 517 aaPredicted RBP5.22□□□□□ -1.57
XRN1-209ENST00000472625 NRXN3Q9Y4C0 1643 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 NEXMIFQ5QGS0 1516 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 PTPRUQ92729 1446 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 RRBP1Q9P2E9 1410 aaKnown RBP5.22□□□□□ -1.57
XRN1-209ENST00000472625 NPHP3Q7Z494 1330 aa5.22□□□□□ -1.57
XRN1-209ENST00000472625 CDC42BPGQ6DT37 1551 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms