RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 SNRKQ9NRH2 765 aa22.06■■□□□ 1.12
GCFC2-208ENST00000472230 NARFQ9UHQ1 456 aa22.06■■□□□ 1.12
GCFC2-208ENST00000472230 SNX14Q9Y5W7 946 aa22.06■■□□□ 1.12
GCFC2-208ENST00000472230 CIZ1Q9ULV3 898 aaPredicted RBP22.05■■□□□ 1.12
GCFC2-208ENST00000472230 ADORA1P30542 326 aa22.05■■□□□ 1.12
GCFC2-208ENST00000472230 BICDL1Q6ZP65 573 aa22.05■■□□□ 1.12
GCFC2-208ENST00000472230 MPHOSPH8Q99549 860 aa22.05■■□□□ 1.12
GCFC2-208ENST00000472230 MROH5Q6ZUA9 1318 aa22.05■■□□□ 1.12
GCFC2-208ENST00000472230 LRP5O75197 1615 aa22.04■■□□□ 1.12
GCFC2-208ENST00000472230 USPL1Q5W0Q7 1092 aa22.04■■□□□ 1.12
GCFC2-208ENST00000472230 TICAM2Q86XR7 235 aa22.04■■□□□ 1.12
GCFC2-208ENST00000472230 MED23Q9ULK4 1368 aa22.04■■□□□ 1.12
GCFC2-208ENST00000472230 GTF2E1P29083 439 aaPredicted RBP22.04■■□□□ 1.12
GCFC2-208ENST00000472230 PDE8BO95263 885 aa22.03■■□□□ 1.12
GCFC2-208ENST00000472230 IGHMBP2P38935 993 aaKnown RBP22.03■■□□□ 1.12
GCFC2-208ENST00000472230 PRPF40BQ6NWY9 871 aaKnown RBP22.03■■□□□ 1.12
GCFC2-208ENST00000472230 RBM8AQ9Y5S9 174 aaKnown RBP22.03■■□□□ 1.12
GCFC2-208ENST00000472230 ABCC12Q96J65 1359 aa22.03■■□□□ 1.12
GCFC2-208ENST00000472230 FRAT2O75474 233 aaPredicted RBP22.03■■□□□ 1.12
GCFC2-208ENST00000472230 SMIM5Q71RC9 77 aa22.03■■□□□ 1.12
GCFC2-208ENST00000472230 UPF3BQ9BZI7 483 aaKnown RBP22.03■■□□□ 1.12
GCFC2-208ENST00000472230 C4BP0C0L5 1744 aa22.03■■□□□ 1.12
GCFC2-208ENST00000472230 RTL9Q8NET4 1388 aa22.02■■□□□ 1.12
GCFC2-208ENST00000472230 ZKSCAN1P17029 563 aaPredicted RBP22.02■■□□□ 1.12
GCFC2-208ENST00000472230 DDIT3P35638 169 aa22.02■■□□□ 1.12
GCFC2-208ENST00000472230 FKBP4Q02790 459 aaKnown RBP eCLIP22.02■■□□□ 1.12
GCFC2-208ENST00000472230 LRRFIP1Q32MZ4 808 aaKnown RBP22.02■■□□□ 1.12
GCFC2-208ENST00000472230 TBC1D9BQ66K14 1250 aa22.02■■□□□ 1.12
GCFC2-208ENST00000472230 FAM196AQ6ZSG2 479 aa22.02■■□□□ 1.12
GCFC2-208ENST00000472230 MAP4K1Q92918 833 aa22.02■■□□□ 1.12
GCFC2-208ENST00000472230 ERFEQ4G0M1 354 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 MCMDC2Q4G0Z9 681 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 KRT27Q7Z3Y8 459 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 VGLL2Q8N8G2 317 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 NYXQ9GZU5 481 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 SEC31BQ9NQW1 1179 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 SRP68Q9UHB9 627 aaKnown RBP22.01■■□□□ 1.11
GCFC2-208ENST00000472230 BRWD3Q6RI45 1802 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 RNF20Q5VTR2 975 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 SETDB2Q96T68 719 aa22.01■■□□□ 1.11
GCFC2-208ENST00000472230 NECTIN1Q15223 517 aa22■■□□□ 1.11
GCFC2-208ENST00000472230 RASEFQ8IZ41 740 aa22■■□□□ 1.11
GCFC2-208ENST00000472230 BCL2L12Q9HB09 334 aa22■■□□□ 1.11
GCFC2-208ENST00000472230 PUM3Q15397 648 aaKnown RBP22■■□□□ 1.11
GCFC2-208ENST00000472230 ZNF589Q86UQ0 364 aaPredicted RBP22■■□□□ 1.11
GCFC2-208ENST00000472230 ARHGEF1Q92888 912 aaKnown RBP21.99■■□□□ 1.11
GCFC2-208ENST00000472230 CDC5LQ99459 802 aaKnown RBP21.99■■□□□ 1.11
GCFC2-208ENST00000472230 HELLSQ9NRZ9 838 aa21.99■■□□□ 1.11
GCFC2-208ENST00000472230 RFC4P35249 363 aa21.99■■□□□ 1.11
GCFC2-208ENST00000472230 CREB3L3Q68CJ9 461 aa21.99■■□□□ 1.11
GCFC2-208ENST00000472230 LPIN2Q92539 896 aa21.99■■□□□ 1.11
GCFC2-208ENST00000472230 SLC5A1P13866 664 aa21.98■■□□□ 1.11
GCFC2-208ENST00000472230 TRAPPC3LQ5T215 181 aa21.98■■□□□ 1.11
GCFC2-208ENST00000472230 HELBQ8NG08 1087 aaPredicted RBP21.98■■□□□ 1.11
GCFC2-208ENST00000472230 KCNB2Q92953 911 aa21.98■■□□□ 1.11
GCFC2-208ENST00000472230 TMX3Q96JJ7 454 aa21.98■■□□□ 1.11
GCFC2-208ENST00000472230 TAF5LO75529 589 aa21.97■■□□□ 1.11
GCFC2-208ENST00000472230 PHF14O94880 888 aa21.97■■□□□ 1.11
GCFC2-208ENST00000472230 NOL8Q76FK4 1167 aaKnown RBP21.97■■□□□ 1.11
GCFC2-208ENST00000472230 CWC22Q9HCG8 908 aaKnown RBP21.97■■□□□ 1.11
GCFC2-208ENST00000472230 CASZ1Q86V15 1759 aa21.97■■□□□ 1.11
GCFC2-208ENST00000472230 ARAP2Q8WZ64 1704 aa21.97■■□□□ 1.11
GCFC2-208ENST00000472230 RNF113AO15541 343 aaKnown RBP21.97■■□□□ 1.11
GCFC2-208ENST00000472230 CASTP20810 708 aaKnown RBP21.97■■□□□ 1.11
GCFC2-208ENST00000472230 SSFA2P28290 1259 aa21.97■■□□□ 1.11
GCFC2-208ENST00000472230 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
GCFC2-208ENST00000472230 JAKMIP1Q96N16 626 aaKnown RBP21.97■■□□□ 1.11
GCFC2-208ENST00000472230 COL24A1Q17RW2 1714 aa21.97■■□□□ 1.11
GCFC2-208ENST00000472230 SLC27A2O14975 620 aa21.96■■□□□ 1.11
GCFC2-208ENST00000472230 SEC62Q99442 399 aaKnown RBP21.96■■□□□ 1.11
GCFC2-208ENST00000472230 C4AP0C0L4 1744 aa21.96■■□□□ 1.11
GCFC2-208ENST00000472230 UQCRFS1P1P0C7P4 283 aa21.96■■□□□ 1.11
GCFC2-208ENST00000472230 ZAP70P43403 619 aa21.96■■□□□ 1.11
GCFC2-208ENST00000472230 SF3B3Q15393 1217 aaKnown RBP21.96■■□□□ 1.11
GCFC2-208ENST00000472230 ZNF512BQ96KM6 892 aaPredicted RBP21.96■■□□□ 1.11
GCFC2-208ENST00000472230 TM6SF1Q9BZW5 370 aa21.96■■□□□ 1.11
GCFC2-208ENST00000472230 PSMA5P28066 241 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 ZMYM1Q5SVZ6 1142 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 ZNF772Q68DY9 489 aaPredicted RBP21.95■■□□□ 1.1
GCFC2-208ENST00000472230 CCDC129Q6ZRS4 1044 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 HMG20BQ9P0W2 317 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 U3KPZ7 1027 aaPredicted RBP21.95■■□□□ 1.1
GCFC2-208ENST00000472230 CHGBP05060 677 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 SCARF1Q14162 830 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 SLC10A5Q5PT55 438 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 TPTE2Q6XPS3 522 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 ANKRD18AQ8IVF6 992 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 CYP46A1Q9Y6A2 500 aa21.95■■□□□ 1.1
GCFC2-208ENST00000472230 NPHP1O15259 732 aa21.94■■□□□ 1.1
GCFC2-208ENST00000472230 ZFYP08048 801 aaPredicted RBP21.94■■□□□ 1.1
GCFC2-208ENST00000472230 FGFR2P21802 821 aa21.94■■□□□ 1.1
GCFC2-208ENST00000472230 TRIM37O94972 964 aa21.94■■□□□ 1.1
GCFC2-208ENST00000472230 SLC27A3Q5K4L6 730 aa21.94■■□□□ 1.1
GCFC2-208ENST00000472230 CCDC102BQ68D86 513 aa21.94■■□□□ 1.1
GCFC2-208ENST00000472230 LRRC4BQ9NT99 713 aa21.94■■□□□ 1.1
GCFC2-208ENST00000472230 MYH7P12883 1935 aa21.93■■□□□ 1.1
GCFC2-208ENST00000472230 ADRA2BP18089 450 aa21.93■■□□□ 1.1
GCFC2-208ENST00000472230 MCAMP43121 646 aa21.93■■□□□ 1.1
GCFC2-208ENST00000472230 RBM6P78332 1123 aaKnown RBP21.93■■□□□ 1.1
GCFC2-208ENST00000472230 RAB3GAP1Q15042 981 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms