RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
ITGB1-209ENST00000472147 PASKQ96RG2 1323 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 RNMTO43148 476 aaKnown RBP7.88□□□□□ -1.15
ITGB1-209ENST00000472147 SRGNP10124 158 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 CANXP27824 592 aaKnown RBP7.88□□□□□ -1.15
ITGB1-209ENST00000472147 RGS19P49795 217 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 USP46P62068 366 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 FUT2Q10981 343 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 C7orf43Q8WVR3 580 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 MASTLQ96GX5 879 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 RSPH6AQ9H0K4 717 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 TAF1DQ9H5J8 278 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-209ENST00000472147 N4BP2Q86UW6 1770 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-209ENST00000472147 WDR90Q96KV7 1748 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 ZNF831Q5JPB2 1677 aa7.88□□□□□ -1.15
ITGB1-209ENST00000472147 CNTNAP1P78357 1384 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 MOXD2PA6NHM9 499 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 HOXA2O43364 376 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 IL6STP40189 918 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-209ENST00000472147 LBX1P52954 281 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 SLC39A6Q13433 755 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 SKIV2LQ15477 1246 aaKnown RBP7.87□□□□□ -1.15
ITGB1-209ENST00000472147 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 CLEC4GQ6UXB4 293 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 NYAP1Q6ZVC0 841 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 RTKN2Q8IZC4 609 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 PRR14Q9BWN1 585 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 ZBTB1Q9Y2K1 713 aa7.87□□□□□ -1.15
ITGB1-209ENST00000472147 PKD1L3Q7Z443 1732 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 KLRG2A4D1S0 409 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-209ENST00000472147 RASSF10A6NK89 507 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 SPTLC1O15269 473 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 NDUFV2P19404 249 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 TBC1D9BQ66K14 1250 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 PRR5LQ6MZQ0 368 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 TTC5Q8N0Z6 440 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 CNTROBQ8N137 903 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 HACL1Q9UJ83 578 aa7.86□□□□□ -1.15
ITGB1-209ENST00000472147 ARFGEF1Q9Y6D6 1849 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 MYH14Q7Z406 1995 aaKnown RBP7.85□□□□□ -1.15
ITGB1-209ENST00000472147 NPHP1O15259 732 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 NPR1P16066 1061 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 ALDH1B1P30837 517 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 GJA5P36382 358 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 ST5P78524 1137 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 MLLT1Q03111 559 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-209ENST00000472147 MORN1Q5T089 497 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 TPTE2Q6XPS3 522 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 HLA-CQ95604 372 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 ZNF775Q96BV0 537 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-209ENST00000472147 ABHD8Q96I13 439 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 TBC1D2BQ9UPU7 963 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 KNSTRNQ9Y448 316 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 KIAA1551Q9HCM1 1747 aa7.85□□□□□ -1.15
ITGB1-209ENST00000472147 COL15A1P39059 1388 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 EPHX2P34913 555 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 MAP2K2P36507 400 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 ECE1P42892 770 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 MTHFSDQ2M296 383 aaKnown RBP7.84□□□□□ -1.15
ITGB1-209ENST00000472147 PUS10Q3MIT2 529 aaKnown RBP7.84□□□□□ -1.15
ITGB1-209ENST00000472147 GRIPAP1Q4V328 841 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 PRPF40BQ6NWY9 871 aaKnown RBP7.84□□□□□ -1.15
ITGB1-209ENST00000472147 RSBN1LQ6PCB5 846 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-209ENST00000472147 ZNF790Q6PG37 636 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 RIC3Q7Z5B4 369 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 GPC2Q8N158 579 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 CNBD1Q8NA66 436 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 PROCA1Q8NCQ7 364 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-209ENST00000472147 POLR3GLQ9BT43 218 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 POLR3EQ9NVU0 708 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 LIMD1Q9UGP4 676 aa7.84□□□□□ -1.15
ITGB1-209ENST00000472147 SBF1O95248 1867 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 WDR33Q9C0J8 1336 aaKnown RBP7.83□□□□□ -1.16
ITGB1-209ENST00000472147 FZD9O00144 591 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 GUCA2AQ02747 115 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 FKBP4Q02790 459 aaKnown RBP eCLIP7.83□□□□□ -1.16
ITGB1-209ENST00000472147 TEFQ10587 303 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 TUSC1Q2TAM9 212 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 CCDC93Q567U6 631 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 EAPPQ56P03 285 aaPredicted RBP7.83□□□□□ -1.16
ITGB1-209ENST00000472147 CC2D2BQ6DHV5 1058 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 JDP2Q8WYK2 163 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 ZNF496Q96IT1 587 aaPredicted RBP7.83□□□□□ -1.16
ITGB1-209ENST00000472147 FMNL2Q96PY5 1086 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 CARMIL3Q8ND23 1372 aa7.83□□□□□ -1.16
ITGB1-209ENST00000472147 GNAT3A8MTJ3 354 aa7.82□□□□□ -1.16
ITGB1-209ENST00000472147 CA12O43570 354 aa7.82□□□□□ -1.16
ITGB1-209ENST00000472147 CAMTA2O94983 1202 aa7.82□□□□□ -1.16
ITGB1-209ENST00000472147 A1BGP04217 495 aa7.82□□□□□ -1.16
ITGB1-209ENST00000472147 HSPA8P11142 646 aaKnown RBP7.82□□□□□ -1.16
ITGB1-209ENST00000472147 BRCA1P38398 1863 aaKnown RBP7.82□□□□□ -1.16
ITGB1-209ENST00000472147 CLK2P49760 499 aaKnown RBP7.82□□□□□ -1.16
ITGB1-209ENST00000472147 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.16
ITGB1-209ENST00000472147 NBPF5PQ86XG9 351 aaPredicted RBP7.82□□□□□ -1.16
ITGB1-209ENST00000472147 SYNE4Q8N205 404 aa7.82□□□□□ -1.16
ITGB1-209ENST00000472147 IL17REQ8NFR9 667 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms