RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 EIF4A1P60842 406 aaKnown RBP14.23□□□□□ -0.13
IRF1-208ENST00000472045 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 PPFIBP1Q86W92 1011 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 TMEM87AQ8NBN3 555 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 ORC3Q9UBD5 711 aaPredicted RBP14.23□□□□□ -0.13
IRF1-208ENST00000472045 LOC102724428A0A0B4J2F2 783 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 SIK1P57059 783 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 TRMT1LQ7Z2T5 733 aaKnown RBP14.23□□□□□ -0.13
IRF1-208ENST00000472045 TEX11Q8IYF3 940 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 ARID3AQ99856 593 aa14.23□□□□□ -0.13
IRF1-208ENST00000472045 LUC7LQ9NQ29 371 aaKnown RBP14.23□□□□□ -0.13
IRF1-208ENST00000472045 NLGN1Q8N2Q7 840 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 NUP62CLQ9H1M0 184 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 KLF18A0A0U1RQI7 1052 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 MPNDQ8N594 471 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 DEF6Q9H4E7 631 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 FAM135BQ49AJ0 1406 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 B4DLN1 442 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 ZBTB43O43298 467 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 SDSP20132 328 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 MRPL12P52815 198 aaKnown RBP14.22□□□□□ -0.13
IRF1-208ENST00000472045 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 VTI1AQ96AJ9 217 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 IGHDP01880 384 aa14.22□□□□□ -0.13
IRF1-208ENST00000472045 LARP6Q9BRS8 491 aaKnown RBP14.22□□□□□ -0.13
IRF1-208ENST00000472045 PPIP5K2O43314 1243 aa14.21□□□□□ -0.13
IRF1-208ENST00000472045 NASPP49321 788 aaPredicted RBP14.21□□□□□ -0.13
IRF1-208ENST00000472045 FAM182BQ5T319 152 aa14.21□□□□□ -0.13
IRF1-208ENST00000472045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.21□□□□□ -0.13
IRF1-208ENST00000472045 SBNO2Q9Y2G9 1366 aa14.21□□□□□ -0.13
IRF1-208ENST00000472045 LIG1P18858 919 aa14.21□□□□□ -0.13
IRF1-208ENST00000472045 C2CD5Q86YS7 1000 aa14.21□□□□□ -0.13
IRF1-208ENST00000472045 PICK1Q9NRD5 415 aa14.21□□□□□ -0.13
IRF1-208ENST00000472045 TCP11L1Q9NUJ3 509 aa14.21□□□□□ -0.13
IRF1-208ENST00000472045 MYOM2P54296 1465 aa14.21□□□□□ -0.14
IRF1-208ENST00000472045 A0A1B0GUL7 405 aa14.21□□□□□ -0.14
IRF1-208ENST00000472045 CAGE1Q8TC20 777 aa14.21□□□□□ -0.14
IRF1-208ENST00000472045 SH2D4AQ9H788 454 aa14.21□□□□□ -0.14
IRF1-208ENST00000472045 USP19O94966 1318 aa14.21□□□□□ -0.14
IRF1-208ENST00000472045 DESP17661 470 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 SKAP1Q86WV1 359 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 CCDC148Q8NFR7 591 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 WDR66Q8TBY9 1149 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 SEPT11Q9NVA2 429 aaKnown RBP14.2□□□□□ -0.14
IRF1-208ENST00000472045 NMIQ13287 307 aaPredicted RBP14.2□□□□□ -0.14
IRF1-208ENST00000472045 RTN1Q16799 776 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 BRF1Q92994 677 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 CALML4Q96GE6 196 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 SCAND2PQ9GZW5 306 aaPredicted RBP14.2□□□□□ -0.14
IRF1-208ENST00000472045 RBM8AQ9Y5S9 174 aaKnown RBP14.2□□□□□ -0.14
IRF1-208ENST00000472045 A2ML1A8K2U0 1454 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 PRDM15P57071 1507 aaPredicted RBP14.2□□□□□ -0.14
IRF1-208ENST00000472045 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 HOOK2Q96ED9 719 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 TSG101Q99816 390 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 MAP3K4Q9Y6R4 1608 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 PCDHB15Q9Y5E8 787 aa14.2□□□□□ -0.14
IRF1-208ENST00000472045 USP6P35125 1406 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 ECM2O94769 699 aaPredicted RBP14.19□□□□□ -0.14
IRF1-208ENST00000472045 SMARCC2Q8TAQ2 1214 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 ZNF594Q96JF6 807 aaPredicted RBP14.19□□□□□ -0.14
IRF1-208ENST00000472045 GCKRQ14397 625 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 HEATR3Q7Z4Q2 680 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 RTL1A6NKG5 1358 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 CBFA2T2O43439 604 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 TAF5LO75529 589 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 KIF20AO95235 890 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 GPS2Q13227 327 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
IRF1-208ENST00000472045 NOM1Q5C9Z4 860 aaKnown RBP14.19□□□□□ -0.14
IRF1-208ENST00000472045 TIMM10P62072 90 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 MNS1Q8NEH6 495 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 MBD4O95243 580 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 NBPF7P0C2Y1 421 aaPredicted RBP14.18□□□□□ -0.14
IRF1-208ENST00000472045 RPS8P62241 208 aaKnown RBP14.18□□□□□ -0.14
IRF1-208ENST00000472045 DPY19L2Q6NUT2 758 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 BEGAINQ9BUH8 593 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 ATP7BP35670 1465 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 EAPPQ56P03 285 aaPredicted RBP14.18□□□□□ -0.14
IRF1-208ENST00000472045 CKAP2LQ8IYA6 745 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 DCTPP1Q9H773 170 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 SAP30BPQ9UHR5 308 aaKnown RBP14.18□□□□□ -0.14
IRF1-208ENST00000472045 TNNQ9UQP3 1299 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 ANKARQ7Z5J8 1434 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 SHROOM2Q13796 1616 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 H7C1D1 291 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 USPL1Q5W0Q7 1092 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 IL17REQ8NFR9 667 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 CNKSR1Q969H4 720 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 KDM5AP29375 1690 aaKnown RBP14.18□□□□□ -0.14
IRF1-208ENST00000472045 AFF2P51816 1311 aa14.18□□□□□ -0.14
IRF1-208ENST00000472045 GIGYF1O75420 1035 aaPredicted RBP14.17□□□□□ -0.14
IRF1-208ENST00000472045 CRKLP46109 303 aaKnown RBP14.17□□□□□ -0.14
IRF1-208ENST00000472045 TXLNBQ8N3L3 684 aa14.17□□□□□ -0.14
IRF1-208ENST00000472045 LPIN2Q92539 896 aa14.17□□□□□ -0.14
IRF1-208ENST00000472045 BIN2Q9UBW5 565 aaPredicted RBP14.17□□□□□ -0.14
IRF1-208ENST00000472045 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms