RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 NEURL1BA8MQ27 555 aa28.88■■■□□ 2.21
C9orf3-213ENST00000471978 H7C1D1 291 aa28.88■■■□□ 2.21
C9orf3-213ENST00000471978 UFL1O94874 794 aa28.88■■■□□ 2.21
C9orf3-213ENST00000471978 ANKRD18AQ8IVF6 992 aa28.88■■■□□ 2.21
C9orf3-213ENST00000471978 GGA1Q9UJY5 639 aa28.88■■■□□ 2.21
C9orf3-213ENST00000471978 SHTN1A0MZ66 631 aa28.87■■■□□ 2.21
C9orf3-213ENST00000471978 HIRAP54198 1017 aaPredicted RBP28.87■■■□□ 2.21
C9orf3-213ENST00000471978 CTSWP56202 376 aa28.87■■■□□ 2.21
C9orf3-213ENST00000471978 MICALL2Q8IY33 904 aa28.87■■■□□ 2.21
C9orf3-213ENST00000471978 DPF2Q92785 391 aa28.87■■■□□ 2.21
C9orf3-213ENST00000471978 PGAP2Q9UHJ9 254 aa28.87■■■□□ 2.21
C9orf3-213ENST00000471978 FLIIQ13045 1269 aa28.86■■■□□ 2.21
C9orf3-213ENST00000471978 TRPM4Q8TD43 1214 aa28.86■■■□□ 2.21
C9orf3-213ENST00000471978 ZC3H15Q8WU90 426 aaKnown RBP28.86■■■□□ 2.21
C9orf3-213ENST00000471978 KCNQ5Q9NR82 932 aa28.86■■■□□ 2.21
C9orf3-213ENST00000471978 CST9Q5W186 159 aa28.85■■■□□ 2.21
C9orf3-213ENST00000471978 TTLL11Q8NHH1 800 aa28.85■■■□□ 2.21
C9orf3-213ENST00000471978 G3V3G9 751 aa28.84■■■□□ 2.21
C9orf3-213ENST00000471978 VAMP4O75379 141 aa28.84■■■□□ 2.21
C9orf3-213ENST00000471978 EXOSC9Q06265 439 aaKnown RBP28.84■■■□□ 2.21
C9orf3-213ENST00000471978 FKBP5Q13451 457 aaPredicted RBP28.84■■■□□ 2.21
C9orf3-213ENST00000471978 DCAF8Q5TAQ9 597 aa28.84■■■□□ 2.21
C9orf3-213ENST00000471978 TNS4Q8IZW8 715 aa28.84■■■□□ 2.21
C9orf3-213ENST00000471978 CDC5LQ99459 802 aaKnown RBP28.84■■■□□ 2.21
C9orf3-213ENST00000471978 GLIS2Q9BZE0 524 aaPredicted RBP28.84■■■□□ 2.21
C9orf3-213ENST00000471978 RTL9Q8NET4 1388 aa28.84■■■□□ 2.21
C9orf3-213ENST00000471978 UBE3BQ7Z3V4 1068 aa28.83■■■□□ 2.21
C9orf3-213ENST00000471978 FAM9BQ8IZU0 186 aa28.83■■■□□ 2.21
C9orf3-213ENST00000471978 XDHP47989 1333 aa28.83■■■□□ 2.21
C9orf3-213ENST00000471978 WDR33Q9C0J8 1336 aaKnown RBP28.83■■■□□ 2.21
C9orf3-213ENST00000471978 H7C1W4 665 aa28.82■■■□□ 2.2
C9orf3-213ENST00000471978 RPS12P25398 132 aaKnown RBP28.82■■■□□ 2.2
C9orf3-213ENST00000471978 AIDAQ96BJ3 306 aa28.82■■■□□ 2.2
C9orf3-213ENST00000471978 GREM2Q9H772 168 aa28.82■■■□□ 2.2
C9orf3-213ENST00000471978 TRPM7Q96QT4 1865 aa28.82■■■□□ 2.2
C9orf3-213ENST00000471978 FOXN1O15353 648 aa28.81■■■□□ 2.2
C9orf3-213ENST00000471978 GCKRQ14397 625 aa28.81■■■□□ 2.2
C9orf3-213ENST00000471978 SAMD7Q7Z3H4 446 aa28.81■■■□□ 2.2
C9orf3-213ENST00000471978 DNAAF4Q8WXU2 420 aa28.81■■■□□ 2.2
C9orf3-213ENST00000471978 CELF2O95319 508 aaKnown RBP28.8■■■□□ 2.2
C9orf3-213ENST00000471978 PAXIP1Q6ZW49 1069 aaPredicted RBP28.8■■■□□ 2.2
C9orf3-213ENST00000471978 ATP2B4P23634 1241 aa28.79■■■□□ 2.2
C9orf3-213ENST00000471978 TBC1D10BQ4KMP7 808 aaPredicted RBP28.79■■■□□ 2.2
C9orf3-213ENST00000471978 CDC37L1Q7L3B6 337 aa28.79■■■□□ 2.2
C9orf3-213ENST00000471978 MYH16Q9H6N6 1097 aa28.79■■■□□ 2.2
C9orf3-213ENST00000471978 SPINK5Q9NQ38 1064 aaPredicted RBP28.79■■■□□ 2.2
C9orf3-213ENST00000471978 BSDC1Q9NW68 430 aaPredicted RBP28.79■■■□□ 2.2
C9orf3-213ENST00000471978 TLL2Q9Y6L7 1015 aa28.79■■■□□ 2.2
C9orf3-213ENST00000471978 MYH3P11055 1940 aa28.79■■■□□ 2.2
C9orf3-213ENST00000471978 VIL1P09327 827 aaKnown RBP28.78■■■□□ 2.2
C9orf3-213ENST00000471978 WBP1LQ9NX94 342 aa28.78■■■□□ 2.2
C9orf3-213ENST00000471978 LINS1Q8NG48 757 aa28.77■■■□□ 2.2
C9orf3-213ENST00000471978 CAPNS2Q96L46 248 aa28.77■■■□□ 2.2
C9orf3-213ENST00000471978 MINPP1Q9UNW1 487 aa28.77■■■□□ 2.2
C9orf3-213ENST00000471978 SCN9AQ15858 1988 aa28.77■■■□□ 2.2
C9orf3-213ENST00000471978 CACNA1FO60840 1977 aa28.76■■■□□ 2.19
C9orf3-213ENST00000471978 EGFRP00533 1210 aa28.76■■■□□ 2.19
C9orf3-213ENST00000471978 ECE1P42892 770 aa28.76■■■□□ 2.19
C9orf3-213ENST00000471978 GRM1Q13255 1194 aa28.76■■■□□ 2.19
C9orf3-213ENST00000471978 RBM26Q5T8P6 1007 aaKnown RBP28.76■■■□□ 2.19
C9orf3-213ENST00000471978 CYP4F22Q6NT55 531 aa28.76■■■□□ 2.19
C9orf3-213ENST00000471978 PLA2G12BQ9BX93 195 aa28.76■■■□□ 2.19
C9orf3-213ENST00000471978 ZNF408Q9H9D4 720 aa28.76■■■□□ 2.19
C9orf3-213ENST00000471978 CTCFP49711 727 aaPredicted RBP28.75■■■□□ 2.19
C9orf3-213ENST00000471978 USP48Q86UV5 1035 aa28.75■■■□□ 2.19
C9orf3-213ENST00000471978 CASP7P55210 303 aa28.74■■■□□ 2.19
C9orf3-213ENST00000471978 MAP2K1Q02750 393 aaPredicted RBP28.74■■■□□ 2.19
C9orf3-213ENST00000471978 SAPCD2Q86UD0 394 aa28.74■■■□□ 2.19
C9orf3-213ENST00000471978 WTIPA6NIX2 430 aaPredicted RBP28.73■■■□□ 2.19
C9orf3-213ENST00000471978 IGHMBP2P38935 993 aaKnown RBP28.73■■■□□ 2.19
C9orf3-213ENST00000471978 SPEF2Q9C093 1822 aa28.73■■■□□ 2.19
C9orf3-213ENST00000471978 ITGA6P23229 1130 aa28.72■■■□□ 2.19
C9orf3-213ENST00000471978 KIF4BQ2VIQ3 1234 aa28.72■■■□□ 2.19
C9orf3-213ENST00000471978 RSBN1LQ6PCB5 846 aaPredicted RBP28.72■■■□□ 2.19
C9orf3-213ENST00000471978 PODNQ7Z5L7 613 aa28.72■■■□□ 2.19
C9orf3-213ENST00000471978 F6X3S4 739 aa28.71■■■□□ 2.19
C9orf3-213ENST00000471978 CCT4P50991 539 aaKnown RBP28.71■■■□□ 2.19
C9orf3-213ENST00000471978 FAM161AQ3B820 660 aa28.71■■■□□ 2.19
C9orf3-213ENST00000471978 KRT26Q7Z3Y9 468 aa28.71■■■□□ 2.19
C9orf3-213ENST00000471978 AGBL3Q8NEM8 1001 aa28.71■■■□□ 2.19
C9orf3-213ENST00000471978 PRDM10Q9NQV6 1147 aa28.71■■■□□ 2.19
C9orf3-213ENST00000471978 MED23Q9ULK4 1368 aa28.71■■■□□ 2.19
C9orf3-213ENST00000471978 CSF1RP07333 972 aa28.7■■■□□ 2.18
C9orf3-213ENST00000471978 DLK2Q6UY11 383 aa28.7■■■□□ 2.18
C9orf3-213ENST00000471978 DCPSQ96C86 337 aaKnown RBP28.7■■■□□ 2.18
C9orf3-213ENST00000471978 USP17L3A6NCW0 530 aa28.69■■■□□ 2.18
C9orf3-213ENST00000471978 USP17L4A6NCW7 530 aa28.69■■■□□ 2.18
C9orf3-213ENST00000471978 CAPN15O75808 1086 aa28.69■■■□□ 2.18
C9orf3-213ENST00000471978 USP17L1Q7RTZ2 530 aa28.69■■■□□ 2.18
C9orf3-213ENST00000471978 MPHOSPH8Q99549 860 aa28.69■■■□□ 2.18
C9orf3-213ENST00000471978 ZNF609O15014 1411 aa28.69■■■□□ 2.18
C9orf3-213ENST00000471978 ZNF280AP59817 542 aaPredicted RBP28.68■■■□□ 2.18
C9orf3-213ENST00000471978 BEND3Q5T5X7 828 aa28.68■■■□□ 2.18
C9orf3-213ENST00000471978 HHIPL1Q96JK4 782 aa28.68■■■□□ 2.18
C9orf3-213ENST00000471978 THSD7BQ9C0I4 1608 aa28.68■■■□□ 2.18
C9orf3-213ENST00000471978 LBX1P52954 281 aa28.67■■■□□ 2.18
C9orf3-213ENST00000471978 ANKRD2Q9GZV1 360 aa28.67■■■□□ 2.18
C9orf3-213ENST00000471978 LEMD3Q9Y2U8 911 aa28.67■■■□□ 2.18
C9orf3-213ENST00000471978 ADM5C9JUS6 153 aa28.66■■■□□ 2.18
C9orf3-213ENST00000471978 AOC2O75106 756 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms