RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ATP2B4P23634 1241 aa7.19□□□□□ -1.26
PRPF40A-207ENST00000471701 XP32Q5T750 250 aa7.19□□□□□ -1.26
PRPF40A-207ENST00000471701 CACTIN-AS1Q8N1I8 211 aa7.19□□□□□ -1.26
PRPF40A-207ENST00000471701 IL22RA1Q8N6P7 574 aa7.19□□□□□ -1.26
PRPF40A-207ENST00000471701 GPR152Q8TDT2 470 aa7.19□□□□□ -1.26
PRPF40A-207ENST00000471701 WFDC12Q8WWY7 111 aa7.19□□□□□ -1.26
PRPF40A-207ENST00000471701 ARID3CA6NKF2 412 aa7.18□□□□□ -1.26
PRPF40A-207ENST00000471701 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
PRPF40A-207ENST00000471701 SCNN1AP37088 669 aa7.18□□□□□ -1.26
PRPF40A-207ENST00000471701 IREB2P48200 963 aaKnown RBP7.18□□□□□ -1.26
PRPF40A-207ENST00000471701 HYAL2Q12891 473 aa7.18□□□□□ -1.26
PRPF40A-207ENST00000471701 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
PRPF40A-207ENST00000471701 ITGB7P26010 798 aa7.17□□□□□ -1.26
PRPF40A-207ENST00000471701 FAM26DQ5JW98 314 aa7.17□□□□□ -1.26
PRPF40A-207ENST00000471701 PRSS36Q5K4E3 855 aa7.17□□□□□ -1.26
PRPF40A-207ENST00000471701 TTC16Q8NEE8 873 aa7.17□□□□□ -1.26
PRPF40A-207ENST00000471701 OR13H1Q8NG92 308 aa7.17□□□□□ -1.26
PRPF40A-207ENST00000471701 MUC3BQ9H195 1237 aa7.17□□□□□ -1.26
PRPF40A-207ENST00000471701 HOXD8P13378 290 aaPredicted RBP7.16□□□□□ -1.26
PRPF40A-207ENST00000471701 TRIP4Q15650 581 aaPredicted RBP7.16□□□□□ -1.26
PRPF40A-207ENST00000471701 MAP4K3Q8IVH8 894 aa7.16□□□□□ -1.26
PRPF40A-207ENST00000471701 SCO2A0A1W2PP80 73 aa7.15□□□□□ -1.26
PRPF40A-207ENST00000471701 ZBTB39O15060 712 aa7.15□□□□□ -1.26
PRPF40A-207ENST00000471701 DEAF1O75398 565 aaPredicted RBP7.15□□□□□ -1.26
PRPF40A-207ENST00000471701 SMNDC1O75940 238 aaKnown RBP eCLIP7.15□□□□□ -1.261e-6■□□□□ 9.7
PRPF40A-207ENST00000471701 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
PRPF40A-207ENST00000471701 PCSK2P16519 638 aa7.15□□□□□ -1.26
PRPF40A-207ENST00000471701 SRA1Q9HD15 236 aaKnown RBP7.15□□□□□ -1.26
PRPF40A-207ENST00000471701 PPME1Q9Y570 386 aa7.15□□□□□ -1.26
PRPF40A-207ENST00000471701 FAM177BA6PVY3 158 aa7.14□□□□□ -1.27
PRPF40A-207ENST00000471701 DLL1O00548 723 aa7.14□□□□□ -1.27
PRPF40A-207ENST00000471701 NOS3P29474 1203 aa7.14□□□□□ -1.27
PRPF40A-207ENST00000471701 CEP135Q66GS9 1140 aa7.14□□□□□ -1.27
PRPF40A-207ENST00000471701 MRPL18Q9H0U6 180 aaKnown RBP7.14□□□□□ -1.27
PRPF40A-207ENST00000471701 ABI2Q9NYB9 513 aaPredicted RBP7.14□□□□□ -1.27
PRPF40A-207ENST00000471701 SEPT3Q9UH03 358 aa7.14□□□□□ -1.27
PRPF40A-207ENST00000471701 TRIM33Q9UPN9 1127 aa7.14□□□□□ -1.27
PRPF40A-207ENST00000471701 PPP1R15AO75807 674 aaPredicted RBP7.13□□□□□ -1.27
PRPF40A-207ENST00000471701 NCAPG2Q86XI2 1143 aa7.13□□□□□ -1.27
PRPF40A-207ENST00000471701 TMEM130Q8N3G9 435 aa7.13□□□□□ -1.27
PRPF40A-207ENST00000471701 NUDT16Q96DE0 195 aaKnown RBP7.13□□□□□ -1.27
PRPF40A-207ENST00000471701 AKTIPQ9H8T0 292 aa7.13□□□□□ -1.27
PRPF40A-207ENST00000471701 ELP3Q9H9T3 547 aa7.13□□□□□ -1.27
PRPF40A-207ENST00000471701 NOM1Q5C9Z4 860 aaKnown RBP7.12□□□□□ -1.27
PRPF40A-207ENST00000471701 PDE12Q6L8Q7 609 aaKnown RBP7.12□□□□□ -1.27
PRPF40A-207ENST00000471701 FAM117BQ6P1L5 589 aa7.12□□□□□ -1.27
PRPF40A-207ENST00000471701 ZNF438Q7Z4V0 828 aa7.12□□□□□ -1.27
PRPF40A-207ENST00000471701 SSBP4Q9BWG4 385 aaPredicted RBP7.12□□□□□ -1.27
PRPF40A-207ENST00000471701 LACRTQ9GZZ8 138 aa7.12□□□□□ -1.27
PRPF40A-207ENST00000471701 SLAIN2Q9P270 581 aa7.12□□□□□ -1.27
PRPF40A-207ENST00000471701 LINC01387J3KSC0 135 aa7.11□□□□□ -1.27
PRPF40A-207ENST00000471701 CDC27P30260 824 aa7.11□□□□□ -1.27
PRPF40A-207ENST00000471701 AAMPQ13685 434 aa7.11□□□□□ -1.27
PRPF40A-207ENST00000471701 SETDB1Q15047 1291 aa7.11□□□□□ -1.27
PRPF40A-207ENST00000471701 COL13A1Q5TAT6 717 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-207ENST00000471701 ALX3O95076 343 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 DNM1Q05193 864 aaKnown RBP7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 C8orf34Q49A92 452 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 ALKBH2Q6NS38 261 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 ATCAYQ86WG3 371 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 CCDC82Q8N4S0 544 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 HELQQ8TDG4 1101 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 EDEM1Q92611 657 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 PMEPA1Q969W9 287 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 PBX4Q9BYU1 374 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 RASSF4Q9H2L5 321 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 MTMR7Q9Y216 660 aa7.1□□□□□ -1.27
PRPF40A-207ENST00000471701 KIF4AO95239 1232 aa7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 CYP2E1P05181 493 aaPredicted RBP7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 CES1P23141 567 aa7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 CDC25BP30305 580 aa7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 ATP11AP98196 1134 aa7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 XKR5Q6UX68 686 aa7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 GTF3C2Q8WUA4 911 aaPredicted RBP7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 MEGF10Q96KG7 1140 aa7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 TMEM63CQ9P1W3 806 aa7.09□□□□□ -1.27
PRPF40A-207ENST00000471701 F8W735 103 aaPredicted RBP7.08□□□□□ -1.28
PRPF40A-207ENST00000471701 PTPRAP18433 802 aa7.08□□□□□ -1.28
PRPF40A-207ENST00000471701 MZF1P28698 734 aaPredicted RBP7.08□□□□□ -1.28
PRPF40A-207ENST00000471701 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
PRPF40A-207ENST00000471701 CEP120Q8N960 986 aa7.08□□□□□ -1.28
PRPF40A-207ENST00000471701 ZFP64Q9NPA5 681 aa7.08□□□□□ -1.28
PRPF40A-207ENST00000471701 SSFA2P28290 1259 aa7.07□□□□□ -1.28
PRPF40A-207ENST00000471701 CABP4P57796 275 aa7.07□□□□□ -1.28
PRPF40A-207ENST00000471701 ARTNQ5T4W7 220 aa7.07□□□□□ -1.28
PRPF40A-207ENST00000471701 PRR23CQ6ZRP0 262 aa7.07□□□□□ -1.28
PRPF40A-207ENST00000471701 NBPF11Q86T75 865 aa7.07□□□□□ -1.28
PRPF40A-207ENST00000471701 DZIP1LQ8IYY4 767 aaKnown RBP7.07□□□□□ -1.28
PRPF40A-207ENST00000471701 CNTN3Q9P232 1028 aa7.07□□□□□ -1.28
PRPF40A-207ENST00000471701 PDGFAP04085 211 aa7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 GLB1P16278 677 aa7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 EIF1AXP47813 144 aaKnown RBP7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 FOXD4L6Q3SYB3 417 aaPredicted RBP7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 TXNDC11Q6PKC3 985 aa7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 FOXD4L3Q6VB84 417 aaPredicted RBP7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 SLC51AQ86UW1 340 aa7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 KLHL23Q8NBE8 558 aa7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 POP1Q99575 1024 aaKnown RBP7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 GGNBP2Q9H3C7 697 aa7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 KANSL3Q9P2N6 904 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms