RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 PDGFDQ9GZP0 370 aaPredicted RBP12.64□□□□□ -0.39
CHMP2B-203ENST00000471660 RTL1A6NKG5 1358 aa12.64□□□□□ -0.39
CHMP2B-203ENST00000471660 SART3Q15020 963 aaKnown RBP12.64□□□□□ -0.39
CHMP2B-203ENST00000471660 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
CHMP2B-203ENST00000471660 TMCO3Q6UWJ1 677 aa12.64□□□□□ -0.39
CHMP2B-203ENST00000471660 PAPPAQ13219 1627 aa12.64□□□□□ -0.39
CHMP2B-203ENST00000471660 ZNF75DP51815 510 aa12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 SSH1Q8WYL5 1049 aa12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 ZNF592Q92610 1267 aa12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 TACO1Q9BSH4 297 aaKnown RBP12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 EXOC6BQ9Y2D4 811 aa12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 PRR36Q9H6K5 1346 aa12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 PHRF1Q9P1Y6 1649 aaKnown RBP12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 PPP1R12AO14974 1030 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 TUBB4AP04350 444 aa12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 TMED8Q6PL24 325 aaPredicted RBP12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 CACTINQ8WUQ7 758 aaKnown RBP12.63□□□□□ -0.39
CHMP2B-203ENST00000471660 GOLIM4O00461 696 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 KIF3CO14782 793 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 POLR3GO15318 223 aaPredicted RBP12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 MAP2K2P36507 400 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 CORO7P57737 925 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 SOS1Q07889 1333 aaPredicted RBP12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 IL17RAQ96F46 866 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 ZSCAN16Q9H4T2 348 aaPredicted RBP12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 GDPD2Q9HCC8 539 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
CHMP2B-203ENST00000471660 ACEP12821 1306 aa12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 OAS2P29728 719 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 EIF3CLB5ME19 914 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 CALRP27797 417 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 SLC15A2Q16348 729 aa12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 GIMAP6Q6P9H5 292 aa12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 EIF3CQ99613 913 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 RRP7AQ9Y3A4 280 aaKnown RBP12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 BCL9O00512 1426 aa12.61□□□□□ -0.39
CHMP2B-203ENST00000471660 TPM1P09493 284 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 TDRD7Q8NHU6 1098 aaKnown RBP12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 RNF217Q8TC41 542 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 NRBP1Q9UHY1 535 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 LRRC37A3O60309 1634 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 C11orf91Q3C1V1 193 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 LRRC8AQ8IWT6 810 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■■■■□ 24.8
CHMP2B-203ENST00000471660 SGSM3Q96HU1 749 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
CHMP2B-203ENST00000471660 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 TICAM2Q86XR7 235 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 ORC3Q9UBD5 711 aaPredicted RBP12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 MKRN1Q9UHC7 482 aaKnown RBP12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 ZBTB7BO15156 539 aaPredicted RBP12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 SMC1AQ14683 1233 aaKnown RBP12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 ARHGAP29Q52LW3 1261 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 LEKR1Q6ZMV7 388 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 NME9Q86XW9 330 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 DRC7Q8IY82 874 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 EFCAB13Q8IY85 973 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 BABAM1Q9NWV8 329 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 FLT4P35916 1363 aa12.59□□□□□ -0.39
CHMP2B-203ENST00000471660 USP27XA6NNY8 438 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 IRF6O14896 467 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 TBC1D8O95759 1140 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 LRCH2Q5VUJ6 765 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 CCAR2Q8N163 923 aaKnown RBP12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 ADAM21Q9UKJ8 722 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 DLG5Q8TDM6 1919 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 KIAA0232Q92628 1395 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 NEK4P51957 841 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 ANAPC15P60006 121 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 E2F4Q16254 413 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 TBC1D22AQ8WUA7 517 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 CNPY2Q9Y2B0 182 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 MRVI1Q9Y6F6 885 aa12.58□□□□□ -0.4
CHMP2B-203ENST00000471660 CASTP20810 708 aaKnown RBP12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 THRAP3Q9Y2W1 955 aaKnown RBP12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 KDRP35968 1356 aa12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 LMO7Q8WWI1 1683 aa12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 ERC2O15083 957 aa12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 C21orf2O43822 256 aa12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 CCDC158Q5M9N0 1113 aa12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 SARM1Q6SZW1 724 aa12.57□□□□□ -0.4
CHMP2B-203ENST00000471660 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 CCDC144BQ3MJ40 725 aa12.56□□□□□ -0.4
CHMP2B-203ENST00000471660 CCDC144CPQ8IYA2 1237 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms