RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 SYCE3A1L190 88 aa18.23■□□□□ 0.51
GCOM1-206ENST00000471563 CIAO1O76071 339 aa18.23■□□□□ 0.51
GCOM1-206ENST00000471563 HCLS1P14317 486 aaPredicted RBP18.23■□□□□ 0.51
GCOM1-206ENST00000471563 ATP5JP18859 108 aa18.23■□□□□ 0.51
GCOM1-206ENST00000471563 ITGA6P23229 1130 aa18.23■□□□□ 0.51
GCOM1-206ENST00000471563 NEK4P51957 841 aa18.23■□□□□ 0.51
GCOM1-206ENST00000471563 SEPT12Q8IYM1 358 aa18.23■□□□□ 0.51
GCOM1-206ENST00000471563 TAF7LQ5H9L4 462 aa18.23■□□□□ 0.51
GCOM1-206ENST00000471563 CCDC39Q9UFE4 941 aa18.23■□□□□ 0.51
GCOM1-206ENST00000471563 NSFL1CQ9UNZ2 370 aaKnown RBP18.23■□□□□ 0.51
GCOM1-206ENST00000471563 CHGBP05060 677 aa18.22■□□□□ 0.51
GCOM1-206ENST00000471563 CHAMP1Q96JM3 812 aa18.22■□□□□ 0.51
GCOM1-206ENST00000471563 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
GCOM1-206ENST00000471563 FSD1Q9BTV5 496 aa18.22■□□□□ 0.51
GCOM1-206ENST00000471563 LSG1Q9H089 658 aaKnown RBP18.22■□□□□ 0.51
GCOM1-206ENST00000471563 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
GCOM1-206ENST00000471563 COL5A3P25940 1745 aaPredicted RBP18.22■□□□□ 0.51
GCOM1-206ENST00000471563 CICQ96RK0 1608 aaPredicted RBP18.22■□□□□ 0.51
GCOM1-206ENST00000471563 A0A1B0GUL7 405 aa18.21■□□□□ 0.51
GCOM1-206ENST00000471563 MCCP23508 829 aa18.21■□□□□ 0.51
GCOM1-206ENST00000471563 CSPP1Q1MSJ5 1256 aa18.21■□□□□ 0.51
GCOM1-206ENST00000471563 ZMYND15Q9H091 742 aa18.21■□□□□ 0.51
GCOM1-206ENST00000471563 NIP7Q9Y221 180 aaKnown RBP eCLIP18.21■□□□□ 0.51
GCOM1-206ENST00000471563 R3HCC1Q9Y3T6 440 aaKnown RBP18.21■□□□□ 0.51
GCOM1-206ENST00000471563 ATRNO75882 1429 aa18.21■□□□□ 0.51
GCOM1-206ENST00000471563 PDE8AO60658 829 aa18.21■□□□□ 0.51
GCOM1-206ENST00000471563 ANAPC15P60006 121 aa18.21■□□□□ 0.51
GCOM1-206ENST00000471563 NMIQ13287 307 aaPredicted RBP18.21■□□□□ 0.51
GCOM1-206ENST00000471563 INTS4Q96HW7 963 aaKnown RBP18.21■□□□□ 0.51
GCOM1-206ENST00000471563 BTAF1O14981 1849 aa18.21■□□□□ 0.51
GCOM1-206ENST00000471563 ONECUT3O60422 494 aaPredicted RBP18.2■□□□□ 0.5
GCOM1-206ENST00000471563 PTH1RQ03431 593 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 PKNOX2Q96KN3 472 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
GCOM1-206ENST00000471563 CEP126Q9P2H0 1117 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 ZNF609O15014 1411 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 RAD50Q92878 1312 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 AMIGO3Q86WK7 504 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 IL17RAQ96F46 866 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 GPR108Q9NPR9 543 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 SH3TC1Q8TE82 1336 aa18.2■□□□□ 0.5
GCOM1-206ENST00000471563 A0A0D9SFI3 127 aa18.19■□□□□ 0.5
GCOM1-206ENST00000471563 HSPA4P34932 840 aa18.19■□□□□ 0.5
GCOM1-206ENST00000471563 FOXD4L5Q5VV16 416 aaPredicted RBP18.19■□□□□ 0.5
GCOM1-206ENST00000471563 DDX46Q7L014 1031 aaKnown RBP18.19■□□□□ 0.5
GCOM1-206ENST00000471563 FOXD4L4Q8WXT5 416 aaPredicted RBP18.19■□□□□ 0.5
GCOM1-206ENST00000471563 UTP14AQ9BVJ6 771 aaKnown RBP18.19■□□□□ 0.5
GCOM1-206ENST00000471563 ANKRD18BA2A2Z9 1011 aa18.19■□□□□ 0.5
GCOM1-206ENST00000471563 ADORA1P30542 326 aa18.19■□□□□ 0.5
GCOM1-206ENST00000471563 LDHAL6AQ6ZMR3 332 aa18.19■□□□□ 0.5
GCOM1-206ENST00000471563 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
GCOM1-206ENST00000471563 RUFY2Q8WXA3 655 aa18.18■□□□□ 0.5
GCOM1-206ENST00000471563 HAUS7Q99871 368 aa18.18■□□□□ 0.5
GCOM1-206ENST00000471563 RIPOR2Q9Y4F9 1068 aa18.18■□□□□ 0.5
GCOM1-206ENST00000471563 NTSR2O95665 410 aa18.18■□□□□ 0.5
GCOM1-206ENST00000471563 SYAP1Q96A49 352 aaPredicted RBP18.18■□□□□ 0.5
GCOM1-206ENST00000471563 TSPY26PQ9H489 355 aa18.18■□□□□ 0.5
GCOM1-206ENST00000471563 CNTNAP4Q9C0A0 1308 aa18.17■□□□□ 0.5
GCOM1-206ENST00000471563 RASEFQ8IZ41 740 aa18.17■□□□□ 0.5
GCOM1-206ENST00000471563 MAP7D2Q96T17 732 aa18.17■□□□□ 0.5
GCOM1-206ENST00000471563 UPF3BQ9BZI7 483 aaKnown RBP18.17■□□□□ 0.5
GCOM1-206ENST00000471563 NHSQ6T4R5 1651 aa18.17■□□□□ 0.5
GCOM1-206ENST00000471563 RIC1Q4ADV7 1423 aa18.17■□□□□ 0.5
GCOM1-206ENST00000471563 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 BICDL1Q6ZP65 573 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 SEC31BQ9NQW1 1179 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 SRP68Q9UHB9 627 aaKnown RBP18.16■□□□□ 0.5
GCOM1-206ENST00000471563 MYH3P11055 1940 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 GNPATO15228 680 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 PARP10Q53GL7 1025 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 METTL24Q5JXM2 366 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 ZNF589Q86UQ0 364 aaPredicted RBP18.16■□□□□ 0.5
GCOM1-206ENST00000471563 XAGE2Q96GT9 111 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 CNNM1Q9NRU3 951 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 FBXO3Q9UK99 471 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
GCOM1-206ENST00000471563 GOLIM4O00461 696 aa18.15■□□□□ 0.5
GCOM1-206ENST00000471563 BCL2L12Q9HB09 334 aa18.15■□□□□ 0.5
GCOM1-206ENST00000471563 UQCRHLA0A096LP55 91 aa18.15■□□□□ 0.5
GCOM1-206ENST00000471563 UQCRHP07919 91 aa18.15■□□□□ 0.5
GCOM1-206ENST00000471563 SNX14Q9Y5W7 946 aa18.15■□□□□ 0.5
GCOM1-206ENST00000471563 HIP1O00291 1037 aa18.14■□□□□ 0.49
GCOM1-206ENST00000471563 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.49
GCOM1-206ENST00000471563 USPL1Q5W0Q7 1092 aa18.14■□□□□ 0.49
GCOM1-206ENST00000471563 RNF214Q8ND24 703 aa18.14■□□□□ 0.49
GCOM1-206ENST00000471563 SEC62Q99442 399 aaKnown RBP18.14■□□□□ 0.49
GCOM1-206ENST00000471563 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
GCOM1-206ENST00000471563 EPB41L2O43491 1005 aaKnown RBP18.14■□□□□ 0.49
GCOM1-206ENST00000471563 PHF14O94880 888 aa18.14■□□□□ 0.49
GCOM1-206ENST00000471563 TBC1D9BQ66K14 1250 aa18.14■□□□□ 0.49
GCOM1-206ENST00000471563 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
GCOM1-206ENST00000471563 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.49
GCOM1-206ENST00000471563 PAG1Q9NWQ8 432 aa18.14■□□□□ 0.49
GCOM1-206ENST00000471563 CCDC171Q6TFL3 1326 aa18.13■□□□□ 0.49
GCOM1-206ENST00000471563 RPS6KA4O75676 772 aa18.13■□□□□ 0.49
GCOM1-206ENST00000471563 IFIT1P09914 478 aaKnown RBP18.13■□□□□ 0.49
GCOM1-206ENST00000471563 SCARF1Q14162 830 aa18.13■□□□□ 0.49
GCOM1-206ENST00000471563 PRPF40BQ6NWY9 871 aaKnown RBP18.13■□□□□ 0.49
GCOM1-206ENST00000471563 CLEC4GQ6UXB4 293 aa18.13■□□□□ 0.49
GCOM1-206ENST00000471563 VGLL2Q8N8G2 317 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms