RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 TBC1D8O95759 1140 aa12.4□□□□□ -0.42
SUSD3-204ENST00000471462 VIL1P09327 827 aaKnown RBP12.4□□□□□ -0.42
SUSD3-204ENST00000471462 FKBP1BP68106 108 aa12.4□□□□□ -0.42
SUSD3-204ENST00000471462 PROSER3Q2NL68 480 aa12.4□□□□□ -0.42
SUSD3-204ENST00000471462 HABP4Q5JVS0 413 aaKnown RBP12.4□□□□□ -0.42
SUSD3-204ENST00000471462 TRMT112Q9UI30 125 aaKnown RBP12.4□□□□□ -0.42
SUSD3-204ENST00000471462 HDAC9Q9UKV0 1011 aa12.4□□□□□ -0.42
SUSD3-204ENST00000471462 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
SUSD3-204ENST00000471462 SH3TC1Q8TE82 1336 aa12.39□□□□□ -0.43
SUSD3-204ENST00000471462 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
SUSD3-204ENST00000471462 HSP90AB3PQ58FF7 597 aa12.39□□□□□ -0.43
SUSD3-204ENST00000471462 NOM1Q5C9Z4 860 aaKnown RBP12.39□□□□□ -0.43
SUSD3-204ENST00000471462 C6orf229H3BNL8 230 aa12.38□□□□□ -0.43
SUSD3-204ENST00000471462 ANXA1P04083 346 aa12.38□□□□□ -0.43
SUSD3-204ENST00000471462 ZNF280AP59817 542 aaPredicted RBP12.38□□□□□ -0.43
SUSD3-204ENST00000471462 GPSM2P81274 684 aa12.38□□□□□ -0.43
SUSD3-204ENST00000471462 TCIRG1Q13488 830 aa12.38□□□□□ -0.43
SUSD3-204ENST00000471462 FBXO46Q6PJ61 603 aaPredicted RBP12.38□□□□□ -0.43
SUSD3-204ENST00000471462 CELF1Q92879 486 aaKnown RBP12.38□□□□□ -0.43
SUSD3-204ENST00000471462 TAF1P21675 1872 aa12.38□□□□□ -0.43
SUSD3-204ENST00000471462 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
SUSD3-204ENST00000471462 CENPFP49454 3210 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 GPR25O00155 361 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 ANP32CO43423 234 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
SUSD3-204ENST00000471462 TM4SF4P48230 202 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 SCARF1Q14162 830 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 ANGEL2Q5VTE6 544 aaKnown RBP12.37□□□□□ -0.43
SUSD3-204ENST00000471462 MOB2Q70IA6 237 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 COPS6Q7L5N1 327 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 TBC1D16Q8TBP0 767 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
SUSD3-204ENST00000471462 SF3B3Q15393 1217 aaKnown RBP12.36□□□□□ -0.43
SUSD3-204ENST00000471462 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
SUSD3-204ENST00000471462 CCDC184Q52MB2 194 aa12.36□□□□□ -0.43
SUSD3-204ENST00000471462 XAGE3Q8WTP9 111 aa12.36□□□□□ -0.43
SUSD3-204ENST00000471462 EYA3Q99504 573 aa12.36□□□□□ -0.43
SUSD3-204ENST00000471462 ZNF609O15014 1411 aa12.36□□□□□ -0.43
SUSD3-204ENST00000471462 PAPPA2Q9BXP8 1791 aa12.35□□□□□ -0.43
SUSD3-204ENST00000471462 COL4A1P02462 1669 aa12.35□□□□□ -0.43
SUSD3-204ENST00000471462 UBE2Q2LH0YL09 131 aa12.35□□□□□ -0.43
SUSD3-204ENST00000471462 AIMP1Q12904 312 aaKnown RBP12.35□□□□□ -0.43
SUSD3-204ENST00000471462 AGBL3Q8NEM8 1001 aa12.35□□□□□ -0.43
SUSD3-204ENST00000471462 CFHR5Q9BXR6 569 aa12.35□□□□□ -0.43
SUSD3-204ENST00000471462 BRCA2P51587 3418 aa12.35□□□□□ -0.43
SUSD3-204ENST00000471462 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
SUSD3-204ENST00000471462 PITPNM2Q9BZ72 1349 aa12.35□□□□□ -0.43
SUSD3-204ENST00000471462 NEFMP07197 916 aa12.34□□□□□ -0.43
SUSD3-204ENST00000471462 RSBN1LQ6PCB5 846 aaPredicted RBP12.34□□□□□ -0.43
SUSD3-204ENST00000471462 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
SUSD3-204ENST00000471462 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
SUSD3-204ENST00000471462 GMLQ99445 158 aa12.34□□□□□ -0.43
SUSD3-204ENST00000471462 ZC3H12CQ9C0D7 883 aaKnown RBP12.34□□□□□ -0.43
SUSD3-204ENST00000471462 R3HDMLQ9H3Y0 253 aa12.34□□□□□ -0.43
SUSD3-204ENST00000471462 PODXL2Q9NZ53 605 aa12.34□□□□□ -0.43
SUSD3-204ENST00000471462 TSPYL4Q9UJ04 414 aa12.34□□□□□ -0.43
SUSD3-204ENST00000471462 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
SUSD3-204ENST00000471462 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
SUSD3-204ENST00000471462 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
SUSD3-204ENST00000471462 FKTNO75072 461 aa12.33□□□□□ -0.44
SUSD3-204ENST00000471462 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
SUSD3-204ENST00000471462 DIEXFQ68CQ4 756 aaKnown RBP12.33□□□□□ -0.44
SUSD3-204ENST00000471462 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
SUSD3-204ENST00000471462 MYOZ2Q9NPC6 264 aa12.33□□□□□ -0.44
SUSD3-204ENST00000471462 USP17L8P0C7I0 530 aa12.32□□□□□ -0.44
SUSD3-204ENST00000471462 FXR1P51114 621 aaKnown RBP eCLIP12.32□□□□□ -0.44
SUSD3-204ENST00000471462 PRAMEF18Q5VWM3 479 aa12.32□□□□□ -0.44
SUSD3-204ENST00000471462 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
SUSD3-204ENST00000471462 ISCA1Q9BUE6 129 aa12.32□□□□□ -0.44
SUSD3-204ENST00000471462 SCAF8Q9UPN6 1271 aaKnown RBP12.32□□□□□ -0.44
SUSD3-204ENST00000471462 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
SUSD3-204ENST00000471462 BABAM1Q9NWV8 329 aa12.31□□□□□ -0.44
SUSD3-204ENST00000471462 G3V3G9 751 aa12.3□□□□□ -0.44
SUSD3-204ENST00000471462 UFL1O94874 794 aa12.3□□□□□ -0.44
SUSD3-204ENST00000471462 SREBF2Q12772 1141 aa12.3□□□□□ -0.44
SUSD3-204ENST00000471462 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
SUSD3-204ENST00000471462 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
SUSD3-204ENST00000471462 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
SUSD3-204ENST00000471462 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
SUSD3-204ENST00000471462 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
SUSD3-204ENST00000471462 SZT2Q5T011 3432 aa12.3□□□□□ -0.44
SUSD3-204ENST00000471462 ATP5J2-PTCD1G3V325 749 aa12.29□□□□□ -0.44
SUSD3-204ENST00000471462 PTPN12Q05209 780 aaKnown RBP12.29□□□□□ -0.44
SUSD3-204ENST00000471462 ANKIB1Q9P2G1 1089 aa12.29□□□□□ -0.44
SUSD3-204ENST00000471462 GGA1Q9UJY5 639 aa12.29□□□□□ -0.44
SUSD3-204ENST00000471462 USP17L3A6NCW0 530 aa12.28□□□□□ -0.44
SUSD3-204ENST00000471462 USP17L4A6NCW7 530 aa12.28□□□□□ -0.44
SUSD3-204ENST00000471462 IRS4O14654 1257 aaPredicted RBP12.28□□□□□ -0.44
SUSD3-204ENST00000471462 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
SUSD3-204ENST00000471462 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
SUSD3-204ENST00000471462 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
SUSD3-204ENST00000471462 LDLRAD1Q5T700 205 aa12.28□□□□□ -0.44
SUSD3-204ENST00000471462 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
SUSD3-204ENST00000471462 OTOP1Q7RTM1 612 aa12.28□□□□□ -0.44
SUSD3-204ENST00000471462 USP17L1Q7RTZ2 530 aa12.28□□□□□ -0.44
SUSD3-204ENST00000471462 SEC31BQ9NQW1 1179 aa12.28□□□□□ -0.44
SUSD3-204ENST00000471462 TRIM17Q9Y577 477 aa12.28□□□□□ -0.44
SUSD3-204ENST00000471462 ALDH1A1P00352 501 aa12.27□□□□□ -0.45
SUSD3-204ENST00000471462 KRT24Q2M2I5 525 aa12.27□□□□□ -0.45
SUSD3-204ENST00000471462 SPRYD7Q5W111 196 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms