RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 LBX1P52954 281 aa11.97□□□□□ -0.49
CPSF4-211ENST00000471455 GPR153Q6NV75 609 aa11.97□□□□□ -0.49
CPSF4-211ENST00000471455 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
CPSF4-211ENST00000471455 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
CPSF4-211ENST00000471455 SPRYD3Q8NCJ5 442 aa11.96□□□□□ -0.49
CPSF4-211ENST00000471455 PLEKHF1Q96S99 279 aa11.96□□□□□ -0.49
CPSF4-211ENST00000471455 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
CPSF4-211ENST00000471455 THSD7BQ9C0I4 1608 aa11.96□□□□□ -0.5
CPSF4-211ENST00000471455 COL4A5P29400 1685 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 POTEB3A0JP26 581 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 TCERG1O14776 1098 aaKnown RBP11.95□□□□□ -0.5
CPSF4-211ENST00000471455 BBOX1O75936 387 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 HSPA8P11142 646 aaKnown RBP11.95□□□□□ -0.5
CPSF4-211ENST00000471455 EPS15P42566 896 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 SLC10A5Q5PT55 438 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 POTEBQ6S5H4 581 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 DPP8Q6V1X1 898 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-211ENST00000471455 CAPNS2Q96L46 248 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
CPSF4-211ENST00000471455 GPRC5DQ9NZD1 345 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 ZNRF3Q9ULT6 936 aa11.95□□□□□ -0.5
CPSF4-211ENST00000471455 LTBP1Q14766 1721 aa11.94□□□□□ -0.5
CPSF4-211ENST00000471455 ABCC4O15439 1325 aa11.94□□□□□ -0.5
CPSF4-211ENST00000471455 TRPM7Q96QT4 1865 aa11.94□□□□□ -0.5
CPSF4-211ENST00000471455 CA12O43570 354 aa11.94□□□□□ -0.5
CPSF4-211ENST00000471455 TNIP1Q15025 636 aa11.94□□□□□ -0.5
CPSF4-211ENST00000471455 AOC3Q16853 763 aa11.94□□□□□ -0.5
CPSF4-211ENST00000471455 DDX46Q7L014 1031 aaKnown RBP11.94□□□□□ -0.5
CPSF4-211ENST00000471455 TMC4Q7Z404 712 aa11.94□□□□□ -0.5
CPSF4-211ENST00000471455 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
CPSF4-211ENST00000471455 RTFDC1Q9BY42 306 aaPredicted RBP11.94□□□□□ -0.5
CPSF4-211ENST00000471455 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.94□□□□□ -0.5
CPSF4-211ENST00000471455 SLC34A2O95436 690 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 EIF2S2P20042 333 aaKnown RBP11.93□□□□□ -0.5
CPSF4-211ENST00000471455 MAP2K2P36507 400 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 GRM1Q13255 1194 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 MFSD10Q14728 455 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 MPNDQ8N594 471 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
CPSF4-211ENST00000471455 KHSRPQ92945 711 aaKnown RBP eCLIP11.93□□□□□ -0.5
CPSF4-211ENST00000471455 GPR101Q96P66 508 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-211ENST00000471455 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 TLL2Q9Y6L7 1015 aa11.93□□□□□ -0.5
CPSF4-211ENST00000471455 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
CPSF4-211ENST00000471455 RIPK4P57078 832 aa11.92□□□□□ -0.5
CPSF4-211ENST00000471455 KIAA2012Q0VF49 1180 aa11.92□□□□□ -0.5
CPSF4-211ENST00000471455 CIAPIN1Q6FI81 312 aa11.92□□□□□ -0.5
CPSF4-211ENST00000471455 ZNF710Q8N1W2 664 aa11.92□□□□□ -0.5
CPSF4-211ENST00000471455 ABHD8Q96I13 439 aa11.92□□□□□ -0.5
CPSF4-211ENST00000471455 HHIPL1Q96JK4 782 aa11.92□□□□□ -0.5
CPSF4-211ENST00000471455 ANKRD36CQ5JPF3 1778 aa11.92□□□□□ -0.5
CPSF4-211ENST00000471455 TRAF5O00463 557 aa11.91□□□□□ -0.5
CPSF4-211ENST00000471455 CELF2O95319 508 aaKnown RBP11.91□□□□□ -0.5
CPSF4-211ENST00000471455 GMPSP49915 693 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-211ENST00000471455 CXCL9Q07325 125 aa11.91□□□□□ -0.5
CPSF4-211ENST00000471455 GRAPQ13588 217 aa11.91□□□□□ -0.5
CPSF4-211ENST00000471455 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
CPSF4-211ENST00000471455 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-211ENST00000471455 TRMT112Q9UI30 125 aaKnown RBP11.91□□□□□ -0.5
CPSF4-211ENST00000471455 H7C1D1 291 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 EMP3P54852 163 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 PDIA6Q15084 440 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 RALBP1Q15311 655 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 CST9Q5W186 159 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 COPS6Q7L5N1 327 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 NLRP10Q86W26 655 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 XAGE3Q8WTP9 111 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
CPSF4-211ENST00000471455 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-211ENST00000471455 AIMP1Q12904 312 aaKnown RBP11.89□□□□□ -0.51
CPSF4-211ENST00000471455 TCIRG1Q13488 830 aa11.89□□□□□ -0.51
CPSF4-211ENST00000471455 PPP1R15BQ5SWA1 713 aa11.89□□□□□ -0.51
CPSF4-211ENST00000471455 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
CPSF4-211ENST00000471455 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
CPSF4-211ENST00000471455 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
CPSF4-211ENST00000471455 RAD17O75943 681 aa11.88□□□□□ -0.51
CPSF4-211ENST00000471455 ANXA1P04083 346 aa11.88□□□□□ -0.51
CPSF4-211ENST00000471455 HOXB7P09629 217 aa11.88□□□□□ -0.51
CPSF4-211ENST00000471455 HSP90B1P14625 803 aaKnown RBP11.88□□□□□ -0.51
CPSF4-211ENST00000471455 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
CPSF4-211ENST00000471455 BRPF1P55201 1214 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-211ENST00000471455 PROSER3Q2NL68 480 aa11.88□□□□□ -0.51
CPSF4-211ENST00000471455 ZNF408Q9H9D4 720 aa11.88□□□□□ -0.51
CPSF4-211ENST00000471455 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
CPSF4-211ENST00000471455 PCDHGA4Q9Y5G9 962 aa11.88□□□□□ -0.51
CPSF4-211ENST00000471455 LAMB2P55268 1798 aa11.87□□□□□ -0.51
CPSF4-211ENST00000471455 PDE4AP27815 886 aa11.87□□□□□ -0.51
CPSF4-211ENST00000471455 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
CPSF4-211ENST00000471455 NOGQ13253 232 aa11.87□□□□□ -0.51
CPSF4-211ENST00000471455 HDGFL1Q5TGJ6 251 aa11.87□□□□□ -0.51
CPSF4-211ENST00000471455 DPF2Q92785 391 aa11.87□□□□□ -0.51
CPSF4-211ENST00000471455 EYA3Q99504 573 aa11.87□□□□□ -0.51
CPSF4-211ENST00000471455 GLIS2Q9BZE0 524 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-211ENST00000471455 CNOT7Q9UIV1 285 aaKnown RBP11.87□□□□□ -0.51
CPSF4-211ENST00000471455 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
CPSF4-211ENST00000471455 CCDC85CA6NKD9 419 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms