RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 A0A1W2PP55 124 aa9.83□□□□□ -0.84
SMC5-202ENST00000471372 AXIN1O15169 862 aa9.83□□□□□ -0.84
SMC5-202ENST00000471372 CAPN5O15484 640 aaPredicted RBP9.83□□□□□ -0.84
SMC5-202ENST00000471372 MAP3K10Q02779 954 aa9.83□□□□□ -0.84
SMC5-202ENST00000471372 BMS1Q14692 1282 aaKnown RBP9.83□□□□□ -0.84
SMC5-202ENST00000471372 TTC39BQ5VTQ0 682 aaPredicted RBP9.83□□□□□ -0.84
SMC5-202ENST00000471372 KIAA0319Q5VV43 1072 aa9.83□□□□□ -0.84
SMC5-202ENST00000471372 PEAR1Q5VY43 1037 aaPredicted RBP9.83□□□□□ -0.84
SMC5-202ENST00000471372 RSRP1Q9BUV0 290 aa9.83□□□□□ -0.84
SMC5-202ENST00000471372 ZCCHC2Q9C0B9 1178 aaKnown RBP9.83□□□□□ -0.84
SMC5-202ENST00000471372 GPAMQ9HCL2 828 aa9.83□□□□□ -0.84
SMC5-202ENST00000471372 GJA3Q9Y6H8 435 aa9.83□□□□□ -0.84
SMC5-202ENST00000471372 FCGRTP55899 365 aa9.82□□□□□ -0.84
SMC5-202ENST00000471372 SDE2Q6IQ49 451 aa9.82□□□□□ -0.84
SMC5-202ENST00000471372 KIAA0825Q8IV33 1275 aa9.82□□□□□ -0.84
SMC5-202ENST00000471372 NLGN1Q8N2Q7 840 aa9.82□□□□□ -0.84
SMC5-202ENST00000471372 PMEPA1Q969W9 287 aa9.82□□□□□ -0.84
SMC5-202ENST00000471372 RUBCNLQ9H714 662 aa9.82□□□□□ -0.84
SMC5-202ENST00000471372 BRD7Q9NPI1 651 aa9.82□□□□□ -0.84
SMC5-202ENST00000471372 MINDY4BA8MYZ0 360 aa9.81□□□□□ -0.84
SMC5-202ENST00000471372 CCDC85BQ15834 202 aaPredicted RBP9.81□□□□□ -0.84
SMC5-202ENST00000471372 CTC1Q2NKJ3 1217 aa9.81□□□□□ -0.84
SMC5-202ENST00000471372 DACH1Q9UI36 760 aa9.81□□□□□ -0.84
SMC5-202ENST00000471372 FBXO24O75426 580 aa9.8□□□□□ -0.84
SMC5-202ENST00000471372 SASH3O75995 380 aa9.8□□□□□ -0.84
SMC5-202ENST00000471372 OXCT2Q9BYC2 517 aaPredicted RBP9.8□□□□□ -0.84
SMC5-202ENST00000471372 CRISPLD1Q9H336 500 aa9.8□□□□□ -0.84
SMC5-202ENST00000471372 PPP4R2Q9NY27 417 aa9.8□□□□□ -0.84
SMC5-202ENST00000471372 TRAK1Q9UPV9 953 aa9.8□□□□□ -0.84
SMC5-202ENST00000471372 GBP2P32456 591 aaPredicted RBP9.79□□□□□ -0.84
SMC5-202ENST00000471372 NASPP49321 788 aaPredicted RBP9.79□□□□□ -0.84
SMC5-202ENST00000471372 ZNF746Q6NUN9 644 aaPredicted RBP9.79□□□□□ -0.84
SMC5-202ENST00000471372 KRT25Q7Z3Z0 450 aa9.79□□□□□ -0.84
SMC5-202ENST00000471372 JAZF1Q86VZ6 243 aa9.79□□□□□ -0.84
SMC5-202ENST00000471372 RELL1Q8IUW5 271 aa9.79□□□□□ -0.84
SMC5-202ENST00000471372 EAF1Q96JC9 268 aaPredicted RBP9.79□□□□□ -0.84
SMC5-202ENST00000471372 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
SMC5-202ENST00000471372 ZNF408Q9H9D4 720 aa9.79□□□□□ -0.84
SMC5-202ENST00000471372 SSBP05455 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMC5-202ENST00000471372 EDN3P14138 238 aa9.78□□□□□ -0.84
SMC5-202ENST00000471372 TARSP26639 723 aaKnown RBP9.78□□□□□ -0.84
SMC5-202ENST00000471372 EIF4A3P38919 411 aaKnown RBP9.78□□□□□ -0.84
SMC5-202ENST00000471372 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
SMC5-202ENST00000471372 MAP3K11Q16584 847 aa9.78□□□□□ -0.84
SMC5-202ENST00000471372 PRPF40BQ6NWY9 871 aaKnown RBP9.78□□□□□ -0.84
SMC5-202ENST00000471372 CKAP2LQ8IYA6 745 aa9.78□□□□□ -0.84
SMC5-202ENST00000471372 TMEM74Q96NL1 305 aa9.78□□□□□ -0.84
SMC5-202ENST00000471372 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
SMC5-202ENST00000471372 C11orf16Q9NQ32 467 aa9.78□□□□□ -0.84
SMC5-202ENST00000471372 GMPR2Q9P2T1 348 aaKnown RBP9.78□□□□□ -0.84
SMC5-202ENST00000471372 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMC5-202ENST00000471372 AKAP2Q9Y2D5 859 aa9.78□□□□□ -0.84
SMC5-202ENST00000471372 EFR3BQ9Y2G0 817 aa9.78□□□□□ -0.84
SMC5-202ENST00000471372 SBNO2Q9Y2G9 1366 aa9.77□□□□□ -0.84
SMC5-202ENST00000471372 FIGNL2A6NMB9 653 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 C11orf95C9JLR9 678 aaPredicted RBP9.77□□□□□ -0.85
SMC5-202ENST00000471372 MMP20O60882 483 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 PWP1Q13610 501 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 EGFLAMQ63HQ2 1017 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.85
SMC5-202ENST00000471372 TREML4Q6UXN2 200 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 ZNF296Q8WUU4 475 aaPredicted RBP9.77□□□□□ -0.85
SMC5-202ENST00000471372 GINM1Q9NU53 330 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 SALL4Q9UJQ4 1053 aa9.77□□□□□ -0.85
SMC5-202ENST00000471372 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
SMC5-202ENST00000471372 SERINC3Q13530 473 aa9.76□□□□□ -0.85
SMC5-202ENST00000471372 OR13H1Q8NG92 308 aa9.76□□□□□ -0.85
SMC5-202ENST00000471372 TCF12Q99081 682 aa9.76□□□□□ -0.85
SMC5-202ENST00000471372 PPM1HQ9ULR3 514 aa9.76□□□□□ -0.85
SMC5-202ENST00000471372 MRVI1Q9Y6F6 885 aa9.76□□□□□ -0.85
SMC5-202ENST00000471372 PHF20L1A8MW92 1017 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 K7ELQ4 463 aaPredicted RBP9.75□□□□□ -0.85
SMC5-202ENST00000471372 ETFBP38117 255 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 SFSWAPQ12872 951 aaKnown RBP9.75□□□□□ -0.85
SMC5-202ENST00000471372 SAMD5Q5TGI4 173 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 TPTE2Q6XPS3 522 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 DTHD1Q6ZMT9 781 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 RHOVQ96L33 236 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 LIN7BQ9HAP6 207 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 ZFATQ9P243 1243 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 KCNH4Q9UQ05 1017 aa9.75□□□□□ -0.85
SMC5-202ENST00000471372 ACPPP15309 386 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 KCNQ4P56696 695 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 FAM160A1Q05DH4 1040 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 NFX1Q12986 1120 aaKnown RBP9.74□□□□□ -0.85
SMC5-202ENST00000471372 TCEAL1Q15170 157 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 FBXL19Q6PCT2 694 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 NLRP8Q86W28 1048 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 PGBD3Q8N328 593 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 CNTNAP3BQ96NU0 1288 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 CNTNAP3Q9BZ76 1288 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 GSX2Q9BZM3 304 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 TLR6Q9Y2C9 796 aa9.74□□□□□ -0.85
SMC5-202ENST00000471372 MRPL42Q9Y6G3 142 aaKnown RBP9.74□□□□□ -0.85
SMC5-202ENST00000471372 F11P03951 625 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 CELA3AP09093 270 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 CCINQ13939 588 aa9.73□□□□□ -0.85
SMC5-202ENST00000471372 NFE2L2Q16236 605 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms