RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 WISP1O95388 367 aa4.38□□□□□ -1.71
COMMD3-209ENST00000471350 MED26O95402 600 aa4.38□□□□□ -1.71
COMMD3-209ENST00000471350 EIF2AK2P19525 551 aaKnown RBP4.38□□□□□ -1.71
COMMD3-209ENST00000471350 CDCA8Q53HL2 280 aa4.38□□□□□ -1.71
COMMD3-209ENST00000471350 FAM200AQ8TCP9 573 aa4.38□□□□□ -1.71
COMMD3-209ENST00000471350 STK32AQ8WU08 396 aa4.38□□□□□ -1.71
COMMD3-209ENST00000471350 VTI1AQ96AJ9 217 aa4.38□□□□□ -1.71
COMMD3-209ENST00000471350 PRIMPOLQ96LW4 560 aa4.38□□□□□ -1.71
COMMD3-209ENST00000471350 NSUN5Q96P11 429 aaKnown RBP4.38□□□□□ -1.71
COMMD3-209ENST00000471350 UBL7Q96S82 380 aaPredicted RBP4.38□□□□□ -1.71
COMMD3-209ENST00000471350 AKTIPQ9H8T0 292 aa4.38□□□□□ -1.71
COMMD3-209ENST00000471350 ZBTB39O15060 712 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 FSTP19883 344 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 CD97P48960 835 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 ELOAQ14241 798 aaKnown RBP4.37□□□□□ -1.71
COMMD3-209ENST00000471350 SWI5Q1ZZU3 235 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.37□□□□□ -1.71
COMMD3-209ENST00000471350 CMTR1Q8N1G2 835 aaKnown RBP4.37□□□□□ -1.71
COMMD3-209ENST00000471350 ARMC10Q8N2F6 343 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 AGGF1Q8N302 714 aaeCLIP4.37□□□□□ -1.71
COMMD3-209ENST00000471350 IL22RA1Q8N6P7 574 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 OR13H1Q8NG92 308 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 COL26A1Q96A83 441 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 MRPL18Q9H0U6 180 aaKnown RBP4.37□□□□□ -1.71
COMMD3-209ENST00000471350 KCNK4Q9NYG8 393 aa4.37□□□□□ -1.71
COMMD3-209ENST00000471350 NOVA2Q9UNW9 492 aaKnown RBP4.37□□□□□ -1.71
COMMD3-209ENST00000471350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.37□□□□□ -1.71
COMMD3-209ENST00000471350 ACIN1Q9UKV3 1341 aaKnown RBP4.37□□□□□ -1.71
COMMD3-209ENST00000471350 PRMT3O60678 531 aa4.36□□□□□ -1.71
COMMD3-209ENST00000471350 ATP11AP98196 1134 aa4.36□□□□□ -1.71
COMMD3-209ENST00000471350 GDF6Q6KF10 455 aaPredicted RBP4.36□□□□□ -1.71
COMMD3-209ENST00000471350 NBPF11Q86T75 865 aa4.36□□□□□ -1.71
COMMD3-209ENST00000471350 NLRP13Q86W25 1043 aa4.36□□□□□ -1.71
COMMD3-209ENST00000471350 SRA1Q9HD15 236 aaKnown RBP4.36□□□□□ -1.71
COMMD3-209ENST00000471350 ADAMTS4O75173 837 aa4.35□□□□□ -1.71
COMMD3-209ENST00000471350 KIF4AO95239 1232 aa4.35□□□□□ -1.71
COMMD3-209ENST00000471350 PSAPP07602 524 aa4.35□□□□□ -1.71
COMMD3-209ENST00000471350 RFX1P22670 979 aa4.35□□□□□ -1.71
COMMD3-209ENST00000471350 ARID4AP29374 1257 aaPredicted RBP4.35□□□□□ -1.71
COMMD3-209ENST00000471350 C16orf46Q6P387 395 aa4.35□□□□□ -1.71
COMMD3-209ENST00000471350 CXXC1Q9P0U4 656 aaPredicted RBP4.35□□□□□ -1.71
COMMD3-209ENST00000471350 ZNF777Q9ULD5 760 aaPredicted RBP4.35□□□□□ -1.71
COMMD3-209ENST00000471350 BTBD11A6QL63 1104 aa4.34□□□□□ -1.71
COMMD3-209ENST00000471350 KIAA1324LA8MWY0 1029 aaPredicted RBP4.34□□□□□ -1.71
COMMD3-209ENST00000471350 ADAM11O75078 769 aa4.34□□□□□ -1.71
COMMD3-209ENST00000471350 CYP2E1P05181 493 aaPredicted RBP4.34□□□□□ -1.71
COMMD3-209ENST00000471350 MCTP1Q6DN14 999 aa4.34□□□□□ -1.71
COMMD3-209ENST00000471350 KIAA1211Q6ZU35 1233 aa4.34□□□□□ -1.71
COMMD3-209ENST00000471350 SLC51AQ86UW1 340 aa4.34□□□□□ -1.71
COMMD3-209ENST00000471350 MAP4K3Q8IVH8 894 aa4.34□□□□□ -1.71
COMMD3-209ENST00000471350 CEP120Q8N960 986 aa4.34□□□□□ -1.71
COMMD3-209ENST00000471350 COL17A1Q9UMD9 1497 aaPredicted RBP4.33□□□□□ -1.72
COMMD3-209ENST00000471350 LINC01387J3KSC0 135 aa4.33□□□□□ -1.72
COMMD3-209ENST00000471350 NFKBIEO00221 500 aa4.33□□□□□ -1.72
COMMD3-209ENST00000471350 GHRHP01286 108 aa4.33□□□□□ -1.72
COMMD3-209ENST00000471350 BRD2P25440 801 aaKnown RBP4.33□□□□□ -1.72
COMMD3-209ENST00000471350 TMEM164Q5U3C3 297 aa4.33□□□□□ -1.72
COMMD3-209ENST00000471350 TXNDC11Q6PKC3 985 aa4.33□□□□□ -1.72
COMMD3-209ENST00000471350 ZDHHC13Q8IUH4 622 aa4.33□□□□□ -1.72
COMMD3-209ENST00000471350 FOXD4L4Q8WXT5 416 aaPredicted RBP4.33□□□□□ -1.72
COMMD3-209ENST00000471350 FAM46AQ96IP4 442 aaKnown RBP4.33□□□□□ -1.72
COMMD3-209ENST00000471350 RASSF4Q9H2L5 321 aa4.33□□□□□ -1.72
COMMD3-209ENST00000471350 PPME1Q9Y570 386 aa4.33□□□□□ -1.72
COMMD3-209ENST00000471350 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.32□□□□□ -1.72
COMMD3-209ENST00000471350 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
COMMD3-209ENST00000471350 PRR19A6NJB7 356 aa4.32□□□□□ -1.72
COMMD3-209ENST00000471350 TGFB1P01137 390 aa4.32□□□□□ -1.72
COMMD3-209ENST00000471350 EPHA1P21709 976 aa4.32□□□□□ -1.72
COMMD3-209ENST00000471350 ZAP70P43403 619 aa4.32□□□□□ -1.72
COMMD3-209ENST00000471350 CACTIN-AS1Q8N1I8 211 aa4.32□□□□□ -1.72
COMMD3-209ENST00000471350 ADAM19Q9H013 955 aa4.32□□□□□ -1.72
COMMD3-209ENST00000471350 RAXQ9Y2V3 346 aa4.32□□□□□ -1.72
COMMD3-209ENST00000471350 UBAP1LF5GYI3 381 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 DDX3YO15523 660 aaKnown RBP4.31□□□□□ -1.72
COMMD3-209ENST00000471350 ATG7O95352 703 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 IGLV1-40P01703 118 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 ACPPP15309 386 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 GLB1P16278 677 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 SPINK2P20155 84 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 SSTR4P31391 388 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 CD68P34810 354 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-209ENST00000471350 NAA30Q147X3 362 aaPredicted RBP4.31□□□□□ -1.72
COMMD3-209ENST00000471350 CEP135Q66GS9 1140 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 CLP1Q92989 425 aaKnown RBP4.31□□□□□ -1.72
COMMD3-209ENST00000471350 POP1Q99575 1024 aaKnown RBP4.31□□□□□ -1.72
COMMD3-209ENST00000471350 MKNK1Q9BUB5 465 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 CARD10Q9BWT7 1032 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 TMEM63CQ9P1W3 806 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 CNTN3Q9P232 1028 aa4.31□□□□□ -1.72
COMMD3-209ENST00000471350 FSCN2O14926 492 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 GPR152Q8TDT2 470 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 UBASH3BQ8TF42 649 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 KLHDC7BQ96G42 594 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 MYRFLQ96LU7 910 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 FMNL2Q96PY5 1086 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 PBX4Q9BYU1 374 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 LACRTQ9GZZ8 138 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 MUC3BQ9H195 1237 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 GOLGA2P5Q9HBQ8 144 aa4.3□□□□□ -1.72
COMMD3-209ENST00000471350 SH2B1Q9NRF2 756 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms