RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 ROBO2Q9HCK4 1378 aa13.26□□□□□ -0.29
SRGAP3-204ENST00000470951 JCADQ9P266 1359 aa13.26□□□□□ -0.29
SRGAP3-204ENST00000470951 GSDMDP57764 484 aa13.26□□□□□ -0.29
SRGAP3-204ENST00000470951 KMT5BQ4FZB7 885 aa13.26□□□□□ -0.29
SRGAP3-204ENST00000470951 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-204ENST00000470951 PGBD1Q96JS3 809 aa13.26□□□□□ -0.29
SRGAP3-204ENST00000470951 TRAIPQ9BWF2 469 aa13.26□□□□□ -0.29
SRGAP3-204ENST00000470951 SKILP12757 684 aa13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 KRT32Q14532 448 aa13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 FAM173BQ6P4H8 233 aa13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 TFIP11Q9UBB9 837 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 ZNF215Q9UL58 517 aaPredicted RBP13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 KDM3BQ7LBC6 1761 aa13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 SLU7O95391 586 aaKnown RBP13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 NWD1Q149M9 1564 aa13.25□□□□□ -0.29
SRGAP3-204ENST00000470951 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 KCNA6P17658 529 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 RESTQ13127 1097 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 TOB2Q14106 344 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 NAA30Q147X3 362 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 NBPF20Q3BBV1 942 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 ATL3Q6DD88 541 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 CCAR2Q8N163 923 aaKnown RBP13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 MED1Q15648 1581 aaPredicted RBP13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 KCNJ6P48051 423 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 CHMP4CQ96CF2 233 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 IMPACTQ9P2X3 320 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 CEMIPQ8WUJ3 1361 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
SRGAP3-204ENST00000470951 CCZ1BP86790 482 aa13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 NMIQ13287 307 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 ANO10Q9NW15 660 aa13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 STRCP1A6NGW2 1772 aa13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 PI4KAP2A4QPH2 592 aa13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 BECN2A8MW95 431 aa13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 BMS1Q14692 1282 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 PI4KAP1Q8N8J0 262 aa13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
SRGAP3-204ENST00000470951 FBXO38Q6PIJ6 1188 aa13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 NAT10Q9H0A0 1025 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 OSBPL5Q9H0X9 879 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 L2HGDHQ9H9P8 463 aa13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 ADCY9O60503 1353 aa13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 PIK3C2AO00443 1686 aa13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 AACSQ86V21 672 aa13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 FAM227BQ96M60 508 aa13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 RCOR1Q9UKL0 485 aa13.22□□□□□ -0.29
SRGAP3-204ENST00000470951 USP27XA6NNY8 438 aa13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 H3BQV1 296 aa13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 EIF4A1P60842 406 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 PLCD4Q9BRC7 762 aa13.21□□□□□ -0.29
SRGAP3-204ENST00000470951 LOC102724159A0A0B4J2E5 919 aa13.21□□□□□ -0.3
SRGAP3-204ENST00000470951 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.3
SRGAP3-204ENST00000470951 PWP2Q15269 919 aaKnown RBP13.21□□□□□ -0.3
SRGAP3-204ENST00000470951 ELF2Q15723 593 aa13.21□□□□□ -0.3
SRGAP3-204ENST00000470951 NAA16Q6N069 864 aaPredicted RBP13.21□□□□□ -0.3
SRGAP3-204ENST00000470951 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.3
SRGAP3-204ENST00000470951 BRF1Q92994 677 aa13.21□□□□□ -0.3
SRGAP3-204ENST00000470951 NRDCO43847 1150 aa13.2□□□□□ -0.3
SRGAP3-204ENST00000470951 H2AFXP16104 143 aaPredicted RBP13.2□□□□□ -0.3
SRGAP3-204ENST00000470951 CCDC150Q8NCX0 1101 aa13.2□□□□□ -0.3
SRGAP3-204ENST00000470951 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
SRGAP3-204ENST00000470951 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
SRGAP3-204ENST00000470951 CHPF2Q9P2E5 772 aa13.2□□□□□ -0.3
SRGAP3-204ENST00000470951 FEZ2Q9UHY8 353 aaPredicted RBP13.2□□□□□ -0.3
SRGAP3-204ENST00000470951 RFX7Q2KHR2 1363 aa13.2□□□□□ -0.3
SRGAP3-204ENST00000470951 KINO60870 393 aaKnown RBP13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 DTNBO60941 627 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 FAM160A1Q05DH4 1040 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 DHX40Q8IX18 779 aaKnown RBP13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 C9orf78Q9NZ63 289 aaPredicted RBP13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 HOXC9P31274 260 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 SNW1Q13573 536 aaKnown RBP13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 BANK1Q8NDB2 785 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 SMARCC2Q8TAQ2 1214 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 NCAPGQ9BPX3 1015 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 FSD1Q9BTV5 496 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 ERBB3P21860 1342 aa13.19□□□□□ -0.3
SRGAP3-204ENST00000470951 CCP110O43303 1012 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 G3BP1Q13283 466 aaKnown RBP eCLIP13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 ZC3H15Q8WU90 426 aaKnown RBP13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 ZNF396Q96N95 335 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
SRGAP3-204ENST00000470951 MRC1P22897 1456 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms