RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 FAM157BP0CG42 384 aa10.21□□□□□ -0.77
PTP4A1-202ENST00000470661 ATP2B4P23634 1241 aa10.21□□□□□ -0.77
PTP4A1-202ENST00000470661 SAMD5Q5TGI4 173 aa10.21□□□□□ -0.77
PTP4A1-202ENST00000470661 WHAMMQ8TF30 809 aa10.21□□□□□ -0.77
PTP4A1-202ENST00000470661 STRN4Q9NRL3 753 aa10.21□□□□□ -0.77
PTP4A1-202ENST00000470661 C2CD2LO14523 706 aa10.2□□□□□ -0.78
PTP4A1-202ENST00000470661 SLURP2P0DP57 97 aa10.2□□□□□ -0.78
PTP4A1-202ENST00000470661 TCOF1Q13428 1488 aaKnown RBP10.2□□□□□ -0.78
PTP4A1-202ENST00000470661 TNRQ92752 1358 aa10.2□□□□□ -0.78
PTP4A1-202ENST00000470661 BMP4P12644 408 aa10.19□□□□□ -0.78
PTP4A1-202ENST00000470661 DGKZQ13574 1117 aa10.19□□□□□ -0.78
PTP4A1-202ENST00000470661 CEP63Q96MT8 703 aa10.19□□□□□ -0.78
PTP4A1-202ENST00000470661 ANKIB1Q9P2G1 1089 aa10.19□□□□□ -0.78
PTP4A1-202ENST00000470661 BCS1LQ9Y276 419 aa10.19□□□□□ -0.78
PTP4A1-202ENST00000470661 CAMSAP1Q5T5Y3 1602 aa10.18□□□□□ -0.78
PTP4A1-202ENST00000470661 MAST1Q9Y2H9 1570 aa10.18□□□□□ -0.78
PTP4A1-202ENST00000470661 NPATQ14207 1427 aa10.18□□□□□ -0.78
PTP4A1-202ENST00000470661 EFSO43281 561 aa10.18□□□□□ -0.78
PTP4A1-202ENST00000470661 SCNN1AP37088 669 aa10.18□□□□□ -0.78
PTP4A1-202ENST00000470661 NAA30Q147X3 362 aaPredicted RBP10.18□□□□□ -0.78
PTP4A1-202ENST00000470661 GRIN2CQ14957 1233 aa10.18□□□□□ -0.78
PTP4A1-202ENST00000470661 NSFL1CQ9UNZ2 370 aaKnown RBP10.18□□□□□ -0.78
PTP4A1-202ENST00000470661 NCOA1Q15788 1441 aa10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 ZNF335Q9H4Z2 1342 aaPredicted RBP10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 TYRO3Q06418 890 aa10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 ZNF385CQ66K41 422 aaPredicted RBP10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 LYPD4Q6UWN0 246 aa10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 SAP130Q9H0E3 1048 aa10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 LRFN2Q9ULH4 789 aa10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 MROH2AA6NES4 1674 aa10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 DNMT1P26358 1616 aaKnown RBP10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 ABCC3O15438 1527 aa10.17□□□□□ -0.78
PTP4A1-202ENST00000470661 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.16□□□□□ -0.782e-8■□□□□ 9.2
PTP4A1-202ENST00000470661 MROH1Q8NDA8 1641 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 SFSWAPQ12872 951 aaKnown RBP10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 COX20Q5RI15 118 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 BTLAQ7Z6A9 289 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 SVOPQ8N4V2 548 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 FBXO41Q8TF61 875 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 ACDQ96AP0 544 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 BRD7Q9NPI1 651 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 KDM5DQ9BY66 1539 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 DUOX2Q9NRD8 1548 aa10.16□□□□□ -0.78
PTP4A1-202ENST00000470661 MAP2K3P46734 347 aa10.15□□□□□ -0.78
PTP4A1-202ENST00000470661 HIF1AQ16665 826 aa10.15□□□□□ -0.78
PTP4A1-202ENST00000470661 RETREG2Q8NC44 543 aa10.15□□□□□ -0.78
PTP4A1-202ENST00000470661 MYO19Q96H55 970 aa10.15□□□□□ -0.78
PTP4A1-202ENST00000470661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.15□□□□□ -0.78
PTP4A1-202ENST00000470661 MARK1Q9P0L2 795 aa10.15□□□□□ -0.78
PTP4A1-202ENST00000470661 CEP152O94986 1710 aa10.15□□□□□ -0.78
PTP4A1-202ENST00000470661 PZPP20742 1482 aa10.15□□□□□ -0.78
PTP4A1-202ENST00000470661 MYO3AQ8NEV4 1616 aa10.15□□□□□ -0.79
PTP4A1-202ENST00000470661 TGFBR3LH3BV60 316 aa10.14□□□□□ -0.79
PTP4A1-202ENST00000470661 OXCT2Q9BYC2 517 aaPredicted RBP10.14□□□□□ -0.79
PTP4A1-202ENST00000470661 SEPT3Q9UH03 358 aa10.14□□□□□ -0.79
PTP4A1-202ENST00000470661 CROCC2H7BZ55 1655 aa10.14□□□□□ -0.79
PTP4A1-202ENST00000470661 CEP170BQ9Y4F5 1589 aaPredicted RBP10.14□□□□□ -0.79
PTP4A1-202ENST00000470661 A2ML1A8K2U0 1454 aa10.13□□□□□ -0.79
PTP4A1-202ENST00000470661 SHANK2Q9UPX8 1470 aa10.13□□□□□ -0.79
PTP4A1-202ENST00000470661 CELA2BP08218 269 aaPredicted RBP10.13□□□□□ -0.79
PTP4A1-202ENST00000470661 LAMC2Q13753 1193 aa10.13□□□□□ -0.79
PTP4A1-202ENST00000470661 C11orf91Q3C1V1 193 aa10.13□□□□□ -0.79
PTP4A1-202ENST00000470661 C16orf46Q6P387 395 aa10.13□□□□□ -0.79
PTP4A1-202ENST00000470661 COL26A1Q96A83 441 aa10.13□□□□□ -0.79
PTP4A1-202ENST00000470661 DMGDHQ9UI17 866 aaKnown RBP10.13□□□□□ -0.79
PTP4A1-202ENST00000470661 RNF17Q9BXT8 1623 aaKnown RBP10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 PTCD1O75127 700 aaKnown RBP10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 SSFA2P28290 1259 aa10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 LTKP29376 864 aa10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 IDI1Q13907 227 aa10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 IER5Q5VY09 327 aa10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 IFT43Q96FT9 208 aa10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 USTQ9Y2C2 406 aa10.12□□□□□ -0.79
PTP4A1-202ENST00000470661 ERVK-7P63135 1459 aa10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 PTPRTO14522 1441 aa10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 ERBINQ96RT1 1412 aa10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 ANKRD50Q9ULJ7 1429 aa10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 FAM182BQ5T319 152 aa10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 RAB44Q7Z6P3 723 aaPredicted RBP10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 ANKLE2Q86XL3 938 aa10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 THEMISQ8N1K5 641 aaPredicted RBP10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 SLC30A3Q99726 388 aa10.11□□□□□ -0.79
PTP4A1-202ENST00000470661 TNFRSF10BO14763 440 aa10.1□□□□□ -0.79
PTP4A1-202ENST00000470661 IDH3AP50213 366 aa10.1□□□□□ -0.79
PTP4A1-202ENST00000470661 FAM26DQ5JW98 314 aa10.1□□□□□ -0.79
PTP4A1-202ENST00000470661 PHLDB3Q6NSJ2 640 aa10.1□□□□□ -0.79
PTP4A1-202ENST00000470661 GGA1Q9UJY5 639 aa10.1□□□□□ -0.79
PTP4A1-202ENST00000470661 PRR12Q9ULL5 1215 aa10.1□□□□□ -0.79
PTP4A1-202ENST00000470661 KCNH4Q9UQ05 1017 aa10.1□□□□□ -0.79
PTP4A1-202ENST00000470661 KANK1Q14678 1352 aa10.1□□□□□ -0.79
PTP4A1-202ENST00000470661 MICAL2O94851 1124 aa10.09□□□□□ -0.79
PTP4A1-202ENST00000470661 BCRP11274 1271 aa10.09□□□□□ -0.79
PTP4A1-202ENST00000470661 PCBP4P57723 403 aaKnown RBP10.09□□□□□ -0.79
PTP4A1-202ENST00000470661 MAP3K10Q02779 954 aa10.09□□□□□ -0.79
PTP4A1-202ENST00000470661 SPEM2Q0P670 501 aa10.09□□□□□ -0.79
PTP4A1-202ENST00000470661 C1orf229Q6ZS94 237 aaPredicted RBP10.09□□□□□ -0.79
PTP4A1-202ENST00000470661 TXNDC2Q86VQ3 553 aa10.09□□□□□ -0.79
PTP4A1-202ENST00000470661 ETFBKMTQ8IXQ9 262 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms