RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 SUPT20HQ8NEM7 779 aa11.73□□□□□ -0.53
XRN1-208ENST00000470537 RBM17Q96I25 401 aaKnown RBP11.73□□□□□ -0.53
XRN1-208ENST00000470537 HHIPL1Q96JK4 782 aa11.73□□□□□ -0.53
XRN1-208ENST00000470537 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
XRN1-208ENST00000470537 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
XRN1-208ENST00000470537 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
XRN1-208ENST00000470537 U2AF1L5P0DN76 240 aaPredicted RBP11.72□□□□□ -0.53
XRN1-208ENST00000470537 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
XRN1-208ENST00000470537 U2AF1Q01081 240 aaKnown RBP eCLIP11.72□□□□□ -0.53
XRN1-208ENST00000470537 GRM1Q13255 1194 aa11.72□□□□□ -0.53
XRN1-208ENST00000470537 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
XRN1-208ENST00000470537 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
XRN1-208ENST00000470537 RSPH6AQ9H0K4 717 aa11.72□□□□□ -0.53
XRN1-208ENST00000470537 ADARB2Q9NS39 739 aaKnown RBP11.72□□□□□ -0.53
XRN1-208ENST00000470537 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
XRN1-208ENST00000470537 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
XRN1-208ENST00000470537 EVI5O60447 810 aa11.71□□□□□ -0.53
XRN1-208ENST00000470537 NBPF10Q6P3W6 841 aaKnown RBP11.71□□□□□ -0.53
XRN1-208ENST00000470537 OLFM4Q6UX06 510 aa11.71□□□□□ -0.53
XRN1-208ENST00000470537 MCM10Q7L590 875 aa11.71□□□□□ -0.53
XRN1-208ENST00000470537 PPP1R42Q7Z4L9 355 aa11.71□□□□□ -0.53
XRN1-208ENST00000470537 NBPF15Q8N660 670 aa11.71□□□□□ -0.53
XRN1-208ENST00000470537 ZC3H15Q8WU90 426 aaKnown RBP11.71□□□□□ -0.53
XRN1-208ENST00000470537 NLRP3Q96P20 1036 aa11.71□□□□□ -0.53
XRN1-208ENST00000470537 LARP6Q9BRS8 491 aaKnown RBP11.71□□□□□ -0.53
XRN1-208ENST00000470537 ADAMTSL1Q8N6G6 1762 aa11.7□□□□□ -0.54
XRN1-208ENST00000470537 GOLGA8CPA6NN73 597 aa11.7□□□□□ -0.54
XRN1-208ENST00000470537 EPS15P42566 896 aa11.7□□□□□ -0.54
XRN1-208ENST00000470537 SCNN1DP51172 638 aa11.7□□□□□ -0.54
XRN1-208ENST00000470537 HLFQ16534 295 aa11.7□□□□□ -0.54
XRN1-208ENST00000470537 CYP4F22Q6NT55 531 aa11.7□□□□□ -0.54
XRN1-208ENST00000470537 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
XRN1-208ENST00000470537 IBTKQ9P2D0 1353 aaPredicted RBP11.69□□□□□ -0.54
XRN1-208ENST00000470537 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 CDHR2Q9BYE9 1310 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 PPEF1O14829 653 aaPredicted RBP11.69□□□□□ -0.54
XRN1-208ENST00000470537 PPIP5K2O43314 1243 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
XRN1-208ENST00000470537 BRPF1P55201 1214 aaPredicted RBP11.69□□□□□ -0.54
XRN1-208ENST00000470537 CNGB1Q14028 1251 aaPredicted RBP11.69□□□□□ -0.54
XRN1-208ENST00000470537 TNIP1Q15025 636 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 CST9Q5W186 159 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 SAPCD2Q86UD0 394 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 NUTM1Q86Y26 1132 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 NGEFQ8N5V2 710 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 CFAP44Q96MT7 982 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 GPRC5DQ9NZD1 345 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 ZNRF3Q9ULT6 936 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 RIC1Q4ADV7 1423 aa11.69□□□□□ -0.54
XRN1-208ENST00000470537 BBOX1O75936 387 aa11.68□□□□□ -0.54
XRN1-208ENST00000470537 CDC37L1Q7L3B6 337 aa11.68□□□□□ -0.54
XRN1-208ENST00000470537 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
XRN1-208ENST00000470537 PNNQ9H307 717 aaKnown RBP11.68□□□□□ -0.54
XRN1-208ENST00000470537 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
XRN1-208ENST00000470537 COL3A1P02461 1466 aaPredicted RBP11.68□□□□□ -0.54
XRN1-208ENST00000470537 BHMG1C9JSJ3 638 aaPredicted RBP11.67□□□□□ -0.54
XRN1-208ENST00000470537 CELF2O95319 508 aaKnown RBP11.67□□□□□ -0.54
XRN1-208ENST00000470537 NOGQ13253 232 aa11.67□□□□□ -0.54
XRN1-208ENST00000470537 THSD4Q6ZMP0 1018 aa11.67□□□□□ -0.54
XRN1-208ENST00000470537 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
XRN1-208ENST00000470537 ADAM33Q9BZ11 813 aa11.67□□□□□ -0.54
XRN1-208ENST00000470537 PGAP2Q9UHJ9 254 aa11.67□□□□□ -0.54
XRN1-208ENST00000470537 ATP6V0A2Q9Y487 856 aa11.67□□□□□ -0.54
XRN1-208ENST00000470537 ERBB4Q15303 1308 aa11.66□□□□□ -0.54
XRN1-208ENST00000470537 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
XRN1-208ENST00000470537 H7C1D1 291 aa11.66□□□□□ -0.54
XRN1-208ENST00000470537 TRAF5O00463 557 aa11.66□□□□□ -0.54
XRN1-208ENST00000470537 TCERG1O14776 1098 aaKnown RBP11.66□□□□□ -0.54
XRN1-208ENST00000470537 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
XRN1-208ENST00000470537 CIAPIN1Q6FI81 312 aa11.66□□□□□ -0.54
XRN1-208ENST00000470537 DPP8Q6V1X1 898 aaPredicted RBP11.66□□□□□ -0.54
XRN1-208ENST00000470537 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
XRN1-208ENST00000470537 MYL6BP14649 208 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 GPTP24298 496 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 CXCL9Q07325 125 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 DCTN1Q14203 1278 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 SLC10A5Q5PT55 438 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 SUSD4Q5VX71 490 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 TMC4Q7Z404 712 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 SP8Q8IXZ3 490 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 WNT2BQ93097 391 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 UTP14AQ9BVJ6 771 aaKnown RBP11.65□□□□□ -0.54
XRN1-208ENST00000470537 RTFDC1Q9BY42 306 aaPredicted RBP11.65□□□□□ -0.54
XRN1-208ENST00000470537 MCOLN1Q9GZU1 580 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 NBPF3Q9H094 633 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
XRN1-208ENST00000470537 AOC2O75106 756 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 DGKZQ13574 1117 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 AOC3Q16853 763 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 HSP90AB3PQ58FF7 597 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 MPNDQ8N594 471 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 ZNF408Q9H9D4 720 aa11.64□□□□□ -0.55
XRN1-208ENST00000470537 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms