RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 ST18O60284 1047 aa13.28□□□□□ -0.28
SND1-208ENST00000470463 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
SND1-208ENST00000470463 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
SND1-208ENST00000470463 PTF1AQ7RTS3 328 aa13.28□□□□□ -0.28
SND1-208ENST00000470463 ARHGEF1Q92888 912 aaKnown RBP13.28□□□□□ -0.28
SND1-208ENST00000470463 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
SND1-208ENST00000470463 DBNDD2Q9BQY9 259 aa13.28□□□□□ -0.28
SND1-208ENST00000470463 SNRKQ9NRH2 765 aa13.28□□□□□ -0.28
SND1-208ENST00000470463 TLR7Q9NYK1 1049 aaKnown RBP13.28□□□□□ -0.28
SND1-208ENST00000470463 PDE8BO95263 885 aa13.27□□□□□ -0.29
SND1-208ENST00000470463 MCM2P49736 904 aa13.27□□□□□ -0.29
SND1-208ENST00000470463 PUM3Q15397 648 aaKnown RBP13.27□□□□□ -0.29
SND1-208ENST00000470463 ATP2B3Q16720 1220 aa13.27□□□□□ -0.29
SND1-208ENST00000470463 NBPF5PQ86XG9 351 aaPredicted RBP13.27□□□□□ -0.29
SND1-208ENST00000470463 FLAD1Q8NFF5 587 aa13.27□□□□□ -0.29
SND1-208ENST00000470463 CARMIL3Q8ND23 1372 aa13.27□□□□□ -0.29
SND1-208ENST00000470463 MAP4K4O95819 1239 aaPredicted RBP13.26□□□□□ -0.29
SND1-208ENST00000470463 ZFYP08048 801 aaPredicted RBP13.26□□□□□ -0.29
SND1-208ENST00000470463 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
SND1-208ENST00000470463 UQCRFS1P1P0C7P4 283 aa13.26□□□□□ -0.29
SND1-208ENST00000470463 HCLS1P14317 486 aaPredicted RBP13.26□□□□□ -0.29
SND1-208ENST00000470463 TTC39AQ5SRH9 613 aa13.26□□□□□ -0.29
SND1-208ENST00000470463 TBC1D9BQ66K14 1250 aa13.26□□□□□ -0.29
SND1-208ENST00000470463 SYNE4Q8N205 404 aa13.26□□□□□ -0.29
SND1-208ENST00000470463 KBTBD3Q8NAB2 608 aa13.26□□□□□ -0.29
SND1-208ENST00000470463 LPIN2Q92539 896 aa13.26□□□□□ -0.29
SND1-208ENST00000470463 NLRP3Q96P20 1036 aa13.26□□□□□ -0.29
SND1-208ENST00000470463 TBC1D2Q9BYX2 928 aa13.26□□□□□ -0.29
SND1-208ENST00000470463 PUS3Q9BZE2 481 aaKnown RBP13.26□□□□□ -0.29
SND1-208ENST00000470463 COL24A1Q17RW2 1714 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 RIC1Q4ADV7 1423 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 SLC5A1P13866 664 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 TIMM10P62072 90 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 TTF1Q15361 905 aaPredicted RBP13.25□□□□□ -0.29
SND1-208ENST00000470463 CWC27Q6UX04 472 aaKnown RBP13.25□□□□□ -0.29
SND1-208ENST00000470463 ANKRD18AQ8IVF6 992 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
SND1-208ENST00000470463 XAGE2Q96GT9 111 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 KIF2CQ99661 725 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 BCL2L12Q9HB09 334 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
SND1-208ENST00000470463 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.25□□□□□ -0.29
SND1-208ENST00000470463 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
SND1-208ENST00000470463 NPHP1O15259 732 aa13.24□□□□□ -0.29
SND1-208ENST00000470463 HSPA4P34932 840 aa13.24□□□□□ -0.29
SND1-208ENST00000470463 KCNQ4P56696 695 aa13.24□□□□□ -0.29
SND1-208ENST00000470463 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
SND1-208ENST00000470463 ZSCAN25Q6NSZ9 544 aa13.24□□□□□ -0.29
SND1-208ENST00000470463 VGLL2Q8N8G2 317 aa13.24□□□□□ -0.29
SND1-208ENST00000470463 CCDC85AQ96PX6 553 aaPredicted RBP13.24□□□□□ -0.29
SND1-208ENST00000470463 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
SND1-208ENST00000470463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.23□□□□□ -0.29
SND1-208ENST00000470463 FAM177BA6PVY3 158 aa13.23□□□□□ -0.29
SND1-208ENST00000470463 K7ELQ4 463 aaPredicted RBP13.23□□□□□ -0.29
SND1-208ENST00000470463 ZBTB7AO95365 584 aa13.23□□□□□ -0.29
SND1-208ENST00000470463 ZKSCAN1P17029 563 aaPredicted RBP13.23□□□□□ -0.29
SND1-208ENST00000470463 TXNRD1Q16881 649 aa13.23□□□□□ -0.29
SND1-208ENST00000470463 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
SND1-208ENST00000470463 DNAJC2Q99543 621 aaKnown RBP13.23□□□□□ -0.29
SND1-208ENST00000470463 SYT17Q9BSW7 474 aa13.23□□□□□ -0.29
SND1-208ENST00000470463 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.23□□□□□ -0.292e-14■□□□□ 11.1
SND1-208ENST00000470463 HELLSQ9NRZ9 838 aa13.23□□□□□ -0.29
SND1-208ENST00000470463 LRRC4BQ9NT99 713 aa13.23□□□□□ -0.29
SND1-208ENST00000470463 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
SND1-208ENST00000470463 LSG1Q9H089 658 aaKnown RBP13.22□□□□□ -0.29
SND1-208ENST00000470463 HMG20BQ9P0W2 317 aa13.22□□□□□ -0.29
SND1-208ENST00000470463 SRP68Q9UHB9 627 aaKnown RBP13.22□□□□□ -0.29
SND1-208ENST00000470463 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
SND1-208ENST00000470463 CCDC171Q6TFL3 1326 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 PHF14O94880 888 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.29
SND1-208ENST00000470463 FGFR2P21802 821 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 ARID4AP29374 1257 aaPredicted RBP13.21□□□□□ -0.29
SND1-208ENST00000470463 NMIQ13287 307 aaPredicted RBP13.21□□□□□ -0.29
SND1-208ENST00000470463 UBE4AQ14139 1066 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 SLC15A2Q16348 729 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 MCMDC2Q4G0Z9 681 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 CNBD1Q8NA66 436 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 MTFR1LQ9H019 292 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 RGPD3A6NKT7 1758 aaPredicted RBP13.21□□□□□ -0.29
SND1-208ENST00000470463 RGPD4Q7Z3J3 1758 aa13.21□□□□□ -0.29
SND1-208ENST00000470463 C4AP0C0L4 1744 aa13.21□□□□□ -0.3
SND1-208ENST00000470463 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.3
SND1-208ENST00000470463 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 GOLIM4O00461 696 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 ZBTB22O15209 634 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 IGSF3O75054 1194 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 PSMA5P28066 241 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 KCNJ4P48050 445 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 C1QTNF8P60827 252 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 ST5P78524 1137 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
SND1-208ENST00000470463 PROM2Q8N271 834 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 MAP4K1Q92918 833 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 KCNB2Q92953 911 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
SND1-208ENST00000470463 GNL3LQ9NVN8 582 aaKnown RBP13.2□□□□□ -0.3
SND1-208ENST00000470463 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 373.7 ms