RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
LINC00173-201ENST00000470091 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
LINC00173-201ENST00000470091 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
LINC00173-201ENST00000470091 PRDM10Q9NQV6 1147 aa17.31■□□□□ 0.36
LINC00173-201ENST00000470091 POLLQ9UGP5 575 aa17.31■□□□□ 0.36
LINC00173-201ENST00000470091 H7C1D1 291 aa17.3■□□□□ 0.36
LINC00173-201ENST00000470091 PLIN1O60240 522 aa17.3■□□□□ 0.36
LINC00173-201ENST00000470091 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
LINC00173-201ENST00000470091 MAP2K1Q02750 393 aaPredicted RBP17.3■□□□□ 0.36
LINC00173-201ENST00000470091 TRPM4Q8TD43 1214 aa17.3■□□□□ 0.36
LINC00173-201ENST00000470091 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
LINC00173-201ENST00000470091 ZNF408Q9H9D4 720 aa17.3■□□□□ 0.36
LINC00173-201ENST00000470091 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
LINC00173-201ENST00000470091 KCNQ5Q9NR82 932 aa17.3■□□□□ 0.36
LINC00173-201ENST00000470091 PSMD14O00487 310 aa17.29■□□□□ 0.36
LINC00173-201ENST00000470091 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
LINC00173-201ENST00000470091 ZBTB38Q8NAP3 1195 aaPredicted RBP17.29■□□□□ 0.36
LINC00173-201ENST00000470091 AOC2O75106 756 aa17.28■□□□□ 0.36
LINC00173-201ENST00000470091 ECE1P42892 770 aa17.28■□□□□ 0.36
LINC00173-201ENST00000470091 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
LINC00173-201ENST00000470091 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
LINC00173-201ENST00000470091 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
LINC00173-201ENST00000470091 USP48Q86UV5 1035 aa17.28■□□□□ 0.36
LINC00173-201ENST00000470091 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
LINC00173-201ENST00000470091 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.36
LINC00173-201ENST00000470091 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.36
LINC00173-201ENST00000470091 TBC1D16Q8TBP0 767 aa17.27■□□□□ 0.36
LINC00173-201ENST00000470091 EYA3Q99504 573 aa17.27■□□□□ 0.36
LINC00173-201ENST00000470091 ZC3H12CQ9C0D7 883 aaKnown RBP17.27■□□□□ 0.36
LINC00173-201ENST00000470091 ANKIB1Q9P2G1 1089 aa17.27■□□□□ 0.36
LINC00173-201ENST00000470091 PGAP2Q9UHJ9 254 aa17.27■□□□□ 0.36
LINC00173-201ENST00000470091 TLL2Q9Y6L7 1015 aa17.27■□□□□ 0.36
LINC00173-201ENST00000470091 G3V3G9 751 aa17.26■□□□□ 0.35
LINC00173-201ENST00000470091 ECE2O60344 883 aa17.26■□□□□ 0.35
LINC00173-201ENST00000470091 DCAF8Q5TAQ9 597 aa17.26■□□□□ 0.35
LINC00173-201ENST00000470091 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
LINC00173-201ENST00000470091 CDC37L1Q7L3B6 337 aa17.26■□□□□ 0.35
LINC00173-201ENST00000470091 ZC3H15Q8WU90 426 aaKnown RBP17.26■□□□□ 0.35
LINC00173-201ENST00000470091 BEGAINQ9BUH8 593 aa17.26■□□□□ 0.35
LINC00173-201ENST00000470091 CWC25Q9NXE8 425 aaPredicted RBP17.26■□□□□ 0.35
LINC00173-201ENST00000470091 DDX58O95786 925 aaKnown RBP17.25■□□□□ 0.35
LINC00173-201ENST00000470091 HSP90B1P14625 803 aaKnown RBP17.25■□□□□ 0.35
LINC00173-201ENST00000470091 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
LINC00173-201ENST00000470091 SAPCD2Q86UD0 394 aa17.25■□□□□ 0.35
LINC00173-201ENST00000470091 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
LINC00173-201ENST00000470091 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
LINC00173-201ENST00000470091 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
LINC00173-201ENST00000470091 SMC4Q9NTJ3 1288 aa17.25■□□□□ 0.35
LINC00173-201ENST00000470091 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
LINC00173-201ENST00000470091 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
LINC00173-201ENST00000470091 CDHR2Q9BYE9 1310 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 COL4A1P02462 1669 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 PDE8AO60658 829 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 VAMP4O75379 141 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 UFL1O94874 794 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 EGFRP00533 1210 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
LINC00173-201ENST00000470091 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 DPF2Q92785 391 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 METTL22Q9BUU2 404 aaPredicted RBP17.24■□□□□ 0.35
LINC00173-201ENST00000470091 TSKSQ9UJT2 592 aa17.24■□□□□ 0.35
LINC00173-201ENST00000470091 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
LINC00173-201ENST00000470091 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
LINC00173-201ENST00000470091 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
LINC00173-201ENST00000470091 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
LINC00173-201ENST00000470091 CHMP4AQ9BY43 222 aa17.22■□□□□ 0.35
LINC00173-201ENST00000470091 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
LINC00173-201ENST00000470091 TRPM7Q96QT4 1865 aa17.21■□□□□ 0.35
LINC00173-201ENST00000470091 MAP2K2P36507 400 aa17.21■□□□□ 0.35
LINC00173-201ENST00000470091 ALDH1L2Q3SY69 923 aa17.21■□□□□ 0.35
LINC00173-201ENST00000470091 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
LINC00173-201ENST00000470091 KRT26Q7Z3Y9 468 aa17.21■□□□□ 0.35
LINC00173-201ENST00000470091 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
LINC00173-201ENST00000470091 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
LINC00173-201ENST00000470091 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
LINC00173-201ENST00000470091 WTIPA6NIX2 430 aaPredicted RBP17.2■□□□□ 0.34
LINC00173-201ENST00000470091 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
LINC00173-201ENST00000470091 RPS12P25398 132 aaKnown RBP17.2■□□□□ 0.34
LINC00173-201ENST00000470091 ERICH6BQ5W0A0 696 aa17.2■□□□□ 0.34
LINC00173-201ENST00000470091 G2E3Q7L622 706 aa17.2■□□□□ 0.34
LINC00173-201ENST00000470091 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
LINC00173-201ENST00000470091 CRBNQ96SW2 442 aa17.2■□□□□ 0.34
LINC00173-201ENST00000470091 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
LINC00173-201ENST00000470091 ADM5C9JUS6 153 aa17.19■□□□□ 0.34
LINC00173-201ENST00000470091 VIL1P09327 827 aaKnown RBP17.19■□□□□ 0.34
LINC00173-201ENST00000470091 HUNKP57058 714 aa17.19■□□□□ 0.34
LINC00173-201ENST00000470091 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
LINC00173-201ENST00000470091 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
LINC00173-201ENST00000470091 TNNQ9UQP3 1299 aa17.19■□□□□ 0.34
LINC00173-201ENST00000470091 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
LINC00173-201ENST00000470091 NEXNQ0ZGT2 675 aa17.18■□□□□ 0.34
LINC00173-201ENST00000470091 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
LINC00173-201ENST00000470091 MRPL50Q8N5N7 158 aaKnown RBP17.18■□□□□ 0.34
LINC00173-201ENST00000470091 ZIC5Q96T25 663 aa17.18■□□□□ 0.34
LINC00173-201ENST00000470091 LRRC37AA6NMS7 1700 aa17.18■□□□□ 0.34
LINC00173-201ENST00000470091 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
LINC00173-201ENST00000470091 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
LINC00173-201ENST00000470091 CTSWP56202 376 aa17.17■□□□□ 0.34
LINC00173-201ENST00000470091 TTLL11Q8NHH1 800 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms