RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 A0A1B0GUL6 1792 aa11.12□□□□□ -0.63
LSM2-210ENST00000470086 PSMD14O00487 310 aa11.11□□□□□ -0.63
LSM2-210ENST00000470086 CC2D2BQ6DHV5 1058 aa11.11□□□□□ -0.63
LSM2-210ENST00000470086 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
LSM2-210ENST00000470086 CRAMP1Q96RY5 1269 aa11.11□□□□□ -0.63
LSM2-210ENST00000470086 BCL2L13Q9BXK5 485 aa11.11□□□□□ -0.63
LSM2-210ENST00000470086 ATP6V0A2Q9Y487 856 aa11.11□□□□□ -0.63
LSM2-210ENST00000470086 ZNF609O15014 1411 aa11.1□□□□□ -0.63
LSM2-210ENST00000470086 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
LSM2-210ENST00000470086 ASTLQ6HA08 431 aaPredicted RBP11.1□□□□□ -0.63
LSM2-210ENST00000470086 MCM10Q7L590 875 aa11.1□□□□□ -0.63
LSM2-210ENST00000470086 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
LSM2-210ENST00000470086 ZBTB3Q9H5J0 574 aa11.1□□□□□ -0.63
LSM2-210ENST00000470086 DBNDD1Q9H9R9 158 aa11.1□□□□□ -0.63
LSM2-210ENST00000470086 CIZ1Q9ULV3 898 aaPredicted RBP11.1□□□□□ -0.63
LSM2-210ENST00000470086 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
LSM2-210ENST00000470086 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
LSM2-210ENST00000470086 FBXO46Q6PJ61 603 aaPredicted RBP11.09□□□□□ -0.63
LSM2-210ENST00000470086 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
LSM2-210ENST00000470086 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
LSM2-210ENST00000470086 CUL9Q8IWT3 2517 aa11.08□□□□□ -0.64
LSM2-210ENST00000470086 GPR25O00155 361 aa11.08□□□□□ -0.64
LSM2-210ENST00000470086 DIAPH1O60610 1272 aaKnown RBP11.08□□□□□ -0.64
LSM2-210ENST00000470086 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
LSM2-210ENST00000470086 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
LSM2-210ENST00000470086 ZNF34Q8IZ26 560 aa11.08□□□□□ -0.64
LSM2-210ENST00000470086 C2orf69Q8N8R5 385 aa11.08□□□□□ -0.64
LSM2-210ENST00000470086 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
LSM2-210ENST00000470086 RBM17Q96I25 401 aaKnown RBP11.08□□□□□ -0.64
LSM2-210ENST00000470086 SSC5DA1L4H1 1573 aa11.07□□□□□ -0.64
LSM2-210ENST00000470086 DLL1O00548 723 aa11.07□□□□□ -0.64
LSM2-210ENST00000470086 RGL2O15211 777 aa11.07□□□□□ -0.64
LSM2-210ENST00000470086 SNRPA1P09661 255 aaKnown RBP11.07□□□□□ -0.64
LSM2-210ENST00000470086 EN2P19622 333 aaPredicted RBP11.07□□□□□ -0.64
LSM2-210ENST00000470086 TIE1P35590 1138 aa11.07□□□□□ -0.64
LSM2-210ENST00000470086 KIF4BQ2VIQ3 1234 aa11.07□□□□□ -0.64
LSM2-210ENST00000470086 DPP8Q6V1X1 898 aaPredicted RBP11.07□□□□□ -0.64
LSM2-210ENST00000470086 NPM2Q86SE8 214 aaKnown RBP11.07□□□□□ -0.64
LSM2-210ENST00000470086 MIS18AQ9NYP9 233 aa11.07□□□□□ -0.64
LSM2-210ENST00000470086 HDAC9Q9UKV0 1011 aa11.07□□□□□ -0.64
LSM2-210ENST00000470086 TRPC6Q9Y210 931 aa11.07□□□□□ -0.64
LSM2-210ENST00000470086 ATMINO43313 823 aaPredicted RBP11.06□□□□□ -0.64
LSM2-210ENST00000470086 HSPA5P11021 654 aaKnown RBP11.06□□□□□ -0.64
LSM2-210ENST00000470086 PRAMEF18Q5VWM3 479 aa11.06□□□□□ -0.64
LSM2-210ENST00000470086 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
LSM2-210ENST00000470086 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
LSM2-210ENST00000470086 NYXQ9GZU5 481 aa11.06□□□□□ -0.64
LSM2-210ENST00000470086 RSPH6AQ9H0K4 717 aa11.06□□□□□ -0.64
LSM2-210ENST00000470086 PRKAR2BP31323 418 aa11.05□□□□□ -0.64
LSM2-210ENST00000470086 PKN2Q16513 984 aaKnown RBP11.05□□□□□ -0.64
LSM2-210ENST00000470086 MPNDQ8N594 471 aa11.05□□□□□ -0.64
LSM2-210ENST00000470086 OTUD5Q96G74 571 aa11.05□□□□□ -0.64
LSM2-210ENST00000470086 FZD1Q9UP38 647 aa11.05□□□□□ -0.64
LSM2-210ENST00000470086 MYH3P11055 1940 aa11.05□□□□□ -0.64
LSM2-210ENST00000470086 UBE2Q2LH0YL09 131 aa11.04□□□□□ -0.64
LSM2-210ENST00000470086 H7C1D1 291 aa11.04□□□□□ -0.64
LSM2-210ENST00000470086 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
LSM2-210ENST00000470086 MYL6BP14649 208 aa11.04□□□□□ -0.64
LSM2-210ENST00000470086 TNIP1Q15025 636 aa11.04□□□□□ -0.64
LSM2-210ENST00000470086 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
LSM2-210ENST00000470086 ANGEL2Q5VTE6 544 aaKnown RBP11.04□□□□□ -0.64
LSM2-210ENST00000470086 DPF2Q92785 391 aa11.04□□□□□ -0.64
LSM2-210ENST00000470086 THUMPD2Q9BTF0 503 aaKnown RBP11.04□□□□□ -0.64
LSM2-210ENST00000470086 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
LSM2-210ENST00000470086 PRUNE2Q8WUY3 3088 aa11.04□□□□□ -0.64
LSM2-210ENST00000470086 ERVV-1B6SEH8 477 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 RIMBP2O15034 1052 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 ECE2O60344 883 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 ANXA1P04083 346 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 HCLS1P14317 486 aaPredicted RBP11.03□□□□□ -0.64
LSM2-210ENST00000470086 PROSER3Q2NL68 480 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 GRIPAP1Q4V328 841 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
LSM2-210ENST00000470086 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 DCPSQ96C86 337 aaKnown RBP11.03□□□□□ -0.64
LSM2-210ENST00000470086 VPS33BQ9H267 617 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 RTN4Q9NQC3 1192 aaKnown RBP11.03□□□□□ -0.64
LSM2-210ENST00000470086 POLLQ9UGP5 575 aa11.03□□□□□ -0.64
LSM2-210ENST00000470086 CC2D1BQ5T0F9 858 aaKnown RBP11.02□□□□□ -0.65
LSM2-210ENST00000470086 CELF1Q92879 486 aaKnown RBP11.02□□□□□ -0.65
LSM2-210ENST00000470086 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
LSM2-210ENST00000470086 ARAP2Q8WZ64 1704 aa11.01□□□□□ -0.65
LSM2-210ENST00000470086 H0YGN5 161 aa11.01□□□□□ -0.65
LSM2-210ENST00000470086 FKTNO75072 461 aa11.01□□□□□ -0.65
LSM2-210ENST00000470086 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
LSM2-210ENST00000470086 SUPT20HQ8NEM7 779 aa11.01□□□□□ -0.65
LSM2-210ENST00000470086 TRIM17Q9Y577 477 aa11.01□□□□□ -0.65
LSM2-210ENST00000470086 MUC3AQ02505 3323 aa11.01□□□□□ -0.65
LSM2-210ENST00000470086 MGAMO43451 1857 aa11□□□□□ -0.65
LSM2-210ENST00000470086 CDH23Q9H251 3354 aa11□□□□□ -0.65
LSM2-210ENST00000470086 TTLL13PA6NNM8 815 aa11□□□□□ -0.65
LSM2-210ENST00000470086 SOX1O00570 391 aaPredicted RBP11□□□□□ -0.65
LSM2-210ENST00000470086 TM4SF4P48230 202 aa11□□□□□ -0.65
LSM2-210ENST00000470086 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
LSM2-210ENST00000470086 GPSM2P81274 684 aa11□□□□□ -0.65
LSM2-210ENST00000470086 GRAPQ13588 217 aa11□□□□□ -0.65
LSM2-210ENST00000470086 NOM1Q5C9Z4 860 aaKnown RBP11□□□□□ -0.65
LSM2-210ENST00000470086 SULF1Q8IWU6 871 aa11□□□□□ -0.65
LSM2-210ENST00000470086 GRAPLQ8TC17 118 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms