RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
CBWD3-205ENST00000469687 KRT32Q14532 448 aa17.45■□□□□ 0.38
CBWD3-205ENST00000469687 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
CBWD3-205ENST00000469687 PIGBQ92521 554 aa17.45■□□□□ 0.38
CBWD3-205ENST00000469687 GPR108Q9NPR9 543 aa17.45■□□□□ 0.38
CBWD3-205ENST00000469687 ITGB4P16144 1822 aa17.45■□□□□ 0.38
CBWD3-205ENST00000469687 TCIRG1Q13488 830 aa17.45■□□□□ 0.38
CBWD3-205ENST00000469687 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
CBWD3-205ENST00000469687 IFIT1P09914 478 aaKnown RBP17.44■□□□□ 0.38
CBWD3-205ENST00000469687 GIMAP6Q6P9H5 292 aa17.44■□□□□ 0.38
CBWD3-205ENST00000469687 SYNE4Q8N205 404 aa17.44■□□□□ 0.38
CBWD3-205ENST00000469687 GTF3C6Q969F1 213 aa17.44■□□□□ 0.38
CBWD3-205ENST00000469687 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.44■□□□□ 0.38
CBWD3-205ENST00000469687 ADORA1P30542 326 aa17.43■□□□□ 0.38
CBWD3-205ENST00000469687 HCLS1P14317 486 aaPredicted RBP17.43■□□□□ 0.38
CBWD3-205ENST00000469687 MSNP26038 577 aaKnown RBP17.43■□□□□ 0.38
CBWD3-205ENST00000469687 ZMYM1Q5SVZ6 1142 aa17.43■□□□□ 0.38
CBWD3-205ENST00000469687 BRF1Q92994 677 aa17.43■□□□□ 0.38
CBWD3-205ENST00000469687 MAST3O60307 1309 aa17.42■□□□□ 0.38
CBWD3-205ENST00000469687 CIAO1O76071 339 aa17.42■□□□□ 0.38
CBWD3-205ENST00000469687 HSP90B1P14625 803 aaKnown RBP17.42■□□□□ 0.38
CBWD3-205ENST00000469687 HS1BP3Q53T59 392 aa17.42■□□□□ 0.38
CBWD3-205ENST00000469687 NOL7Q9UMY1 257 aaKnown RBP17.42■□□□□ 0.38
CBWD3-205ENST00000469687 PDCP20941 246 aa17.42■□□□□ 0.38
CBWD3-205ENST00000469687 CCDC57Q2TAC2 916 aa17.42■□□□□ 0.38
CBWD3-205ENST00000469687 HELLSQ9NRZ9 838 aa17.42■□□□□ 0.38
CBWD3-205ENST00000469687 ATG3Q9NT62 314 aa17.42■□□□□ 0.38
CBWD3-205ENST00000469687 NHSL1Q5SYE7 1610 aa17.41■□□□□ 0.38
CBWD3-205ENST00000469687 M0R2C6 588 aa17.41■□□□□ 0.38
CBWD3-205ENST00000469687 HSPD1P10809 573 aaKnown RBP17.41■□□□□ 0.38
CBWD3-205ENST00000469687 KRT85P78386 507 aa17.41■□□□□ 0.38
CBWD3-205ENST00000469687 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
CBWD3-205ENST00000469687 SCRN1Q12765 414 aa17.41■□□□□ 0.38
CBWD3-205ENST00000469687 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
CBWD3-205ENST00000469687 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
CBWD3-205ENST00000469687 TFIP11Q9UBB9 837 aaKnown RBP17.41■□□□□ 0.38
CBWD3-205ENST00000469687 HLFQ16534 295 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 CSPP1Q1MSJ5 1256 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 FUCA2Q9BTY2 467 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 CEP126Q9P2H0 1117 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 GPTP24298 496 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 SCARF1Q14162 830 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 TTLL5Q6EMB2 1281 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 XAGE2Q96GT9 111 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 USP25Q9UHP3 1055 aa17.4■□□□□ 0.38
CBWD3-205ENST00000469687 RNF113AO15541 343 aaKnown RBP17.39■□□□□ 0.37
CBWD3-205ENST00000469687 KIF6Q6ZMV9 814 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 MPNDQ8N594 471 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 OSBP2Q969R2 916 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 SLC4A9Q96Q91 983 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 DSCC1Q9BVC3 393 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 SPEF2Q9C093 1822 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 LIG1P18858 919 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 APOBRQ0VD83 1088 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 CHST3Q7LGC8 479 aa17.39■□□□□ 0.37
CBWD3-205ENST00000469687 PPFIA3O75145 1194 aa17.38■□□□□ 0.37
CBWD3-205ENST00000469687 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
CBWD3-205ENST00000469687 FGD1P98174 961 aa17.38■□□□□ 0.37
CBWD3-205ENST00000469687 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
CBWD3-205ENST00000469687 PI16Q6UXB8 463 aa17.38■□□□□ 0.37
CBWD3-205ENST00000469687 DHX32Q7L7V1 743 aaKnown RBP17.38■□□□□ 0.37
CBWD3-205ENST00000469687 ZKSCAN5Q9Y2L8 839 aa17.38■□□□□ 0.37
CBWD3-205ENST00000469687 NWD2Q9ULI1 1742 aa17.38■□□□□ 0.37
CBWD3-205ENST00000469687 E7EWF7 191 aa17.38■□□□□ 0.37
CBWD3-205ENST00000469687 LETM1O95202 739 aaPredicted RBP17.38■□□□□ 0.37
CBWD3-205ENST00000469687 TRIM28Q13263 835 aaKnown RBP17.38■□□□□ 0.37
CBWD3-205ENST00000469687 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
CBWD3-205ENST00000469687 FOSBP53539 338 aa17.37■□□□□ 0.37
CBWD3-205ENST00000469687 TTC39AQ5SRH9 613 aa17.37■□□□□ 0.37
CBWD3-205ENST00000469687 FAM184AQ8NB25 1140 aa17.37■□□□□ 0.37
CBWD3-205ENST00000469687 MAP3K15Q6ZN16 1313 aa17.37■□□□□ 0.37
CBWD3-205ENST00000469687 FOXP2O15409 715 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 CTDNEP1O95476 244 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 CSF1RP07333 972 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 CCT2P78371 535 aaKnown RBP17.36■□□□□ 0.37
CBWD3-205ENST00000469687 EXOSC10Q01780 885 aaKnown RBP17.36■□□□□ 0.37
CBWD3-205ENST00000469687 TAF7LQ5H9L4 462 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 GORABQ5T7V8 394 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 CCDC39Q9UFE4 941 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 ELP1O95163 1332 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 RIC1Q4ADV7 1423 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 MYH7P12883 1935 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 PFKFB2O60825 505 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 STARD3NLO95772 234 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 RESTQ13127 1097 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 IFIT5Q13325 482 aaKnown RBP17.36■□□□□ 0.37
CBWD3-205ENST00000469687 CAMK4Q16566 473 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 CCDC158Q5M9N0 1113 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 GIGYF2Q6Y7W6 1299 aaKnown RBP17.36■□□□□ 0.37
CBWD3-205ENST00000469687 NSUN7Q8NE18 718 aaKnown RBP17.36■□□□□ 0.37
CBWD3-205ENST00000469687 LEO1Q8WVC0 666 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-205ENST00000469687 SPATA32Q96LK8 384 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 PLA2G12BQ9BX93 195 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 GREM2Q9H772 168 aa17.36■□□□□ 0.37
CBWD3-205ENST00000469687 NCOA5Q9HCD5 579 aaKnown RBP17.36■□□□□ 0.37
CBWD3-205ENST00000469687 MYO5AQ9Y4I1 1855 aaKnown RBP17.36■□□□□ 0.37
CBWD3-205ENST00000469687 KDM4FA0A1W2PPD8 638 aa17.35■□□□□ 0.37
CBWD3-205ENST00000469687 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms