RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 ANKRD18AQ8IVF6 992 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 TBC1D16Q8TBP0 767 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 MRS2Q9HD23 443 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 WBP1LQ9NX94 342 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 GGA1Q9UJY5 639 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 TLL2Q9Y6L7 1015 aa14.07□□□□□ -0.16
COL4A3-204ENST00000469504 WDR33Q9C0J8 1336 aaKnown RBP14.07□□□□□ -0.16
COL4A3-204ENST00000469504 PI4KAP2A4QPH2 592 aa14.06□□□□□ -0.16
COL4A3-204ENST00000469504 ECE2O60344 883 aa14.06□□□□□ -0.16
COL4A3-204ENST00000469504 MICALL2Q8IY33 904 aa14.06□□□□□ -0.16
COL4A3-204ENST00000469504 PI4KAP1Q8N8J0 262 aa14.06□□□□□ -0.16
COL4A3-204ENST00000469504 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
COL4A3-204ENST00000469504 ANKIB1Q9P2G1 1089 aa14.06□□□□□ -0.16
COL4A3-204ENST00000469504 XDHP47989 1333 aa14.06□□□□□ -0.16
COL4A3-204ENST00000469504 RTL9Q8NET4 1388 aa14.06□□□□□ -0.16
COL4A3-204ENST00000469504 ZNF609O15014 1411 aa14.06□□□□□ -0.16
COL4A3-204ENST00000469504 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
COL4A3-204ENST00000469504 G3V3G9 751 aa14.05□□□□□ -0.16
COL4A3-204ENST00000469504 PSMD14O00487 310 aa14.05□□□□□ -0.16
COL4A3-204ENST00000469504 CTSWP56202 376 aa14.05□□□□□ -0.16
COL4A3-204ENST00000469504 CCDC184Q52MB2 194 aa14.05□□□□□ -0.16
COL4A3-204ENST00000469504 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
COL4A3-204ENST00000469504 ZNF428Q96B54 188 aa14.05□□□□□ -0.16
COL4A3-204ENST00000469504 DBNDD1Q9H9R9 158 aa14.05□□□□□ -0.16
COL4A3-204ENST00000469504 SEC31BQ9NQW1 1179 aa14.05□□□□□ -0.16
COL4A3-204ENST00000469504 RIMBP2O15034 1052 aa14.04□□□□□ -0.16
COL4A3-204ENST00000469504 FOXN1O15353 648 aa14.04□□□□□ -0.16
COL4A3-204ENST00000469504 UFL1O94874 794 aa14.04□□□□□ -0.16
COL4A3-204ENST00000469504 IGKV5-2P06315 115 aa14.04□□□□□ -0.16
COL4A3-204ENST00000469504 ATP2B4P23634 1241 aa14.04□□□□□ -0.16
COL4A3-204ENST00000469504 MAP2K2P36507 400 aa14.04□□□□□ -0.16
COL4A3-204ENST00000469504 CST9Q5W186 159 aa14.04□□□□□ -0.16
COL4A3-204ENST00000469504 MYH16Q9H6N6 1097 aa14.04□□□□□ -0.16
COL4A3-204ENST00000469504 BSDC1Q9NW68 430 aaPredicted RBP14.04□□□□□ -0.16
COL4A3-204ENST00000469504 NEURL1BA8MQ27 555 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 CELF2O95319 508 aaKnown RBP14.03□□□□□ -0.16
COL4A3-204ENST00000469504 VIL1P09327 827 aaKnown RBP14.03□□□□□ -0.16
COL4A3-204ENST00000469504 HIRAP54198 1017 aaPredicted RBP14.03□□□□□ -0.16
COL4A3-204ENST00000469504 FLIIQ13045 1269 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 PODNQ7Z5L7 613 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 SAPCD2Q86UD0 394 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 AGBL3Q8NEM8 1001 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 TRPM4Q8TD43 1214 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 CAPNS2Q96L46 248 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 BEGAINQ9BUH8 593 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 PLA2G12BQ9BX93 195 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 THSD7BQ9C0I4 1608 aa14.03□□□□□ -0.16
COL4A3-204ENST00000469504 TAF1P21675 1872 aa14.02□□□□□ -0.16
COL4A3-204ENST00000469504 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.17
COL4A3-204ENST00000469504 H7C1W4 665 aa14.02□□□□□ -0.17
COL4A3-204ENST00000469504 TRAF5O00463 557 aa14.02□□□□□ -0.17
COL4A3-204ENST00000469504 TTLL11Q8NHH1 800 aa14.02□□□□□ -0.17
COL4A3-204ENST00000469504 GPR101Q96P66 508 aaPredicted RBP14.02□□□□□ -0.17
COL4A3-204ENST00000469504 GLIS2Q9BZE0 524 aaPredicted RBP14.02□□□□□ -0.17
COL4A3-204ENST00000469504 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
COL4A3-204ENST00000469504 TRPM7Q96QT4 1865 aa14.01□□□□□ -0.17
COL4A3-204ENST00000469504 MED23Q9ULK4 1368 aa14.01□□□□□ -0.17
COL4A3-204ENST00000469504 CA12O43570 354 aa14.01□□□□□ -0.17
COL4A3-204ENST00000469504 MMP14P50281 582 aa14.01□□□□□ -0.17
COL4A3-204ENST00000469504 DOK7Q18PE1 504 aa14.01□□□□□ -0.17
COL4A3-204ENST00000469504 PAXIP1Q6ZW49 1069 aaPredicted RBP14.01□□□□□ -0.17
COL4A3-204ENST00000469504 LINS1Q8NG48 757 aa14.01□□□□□ -0.17
COL4A3-204ENST00000469504 DNAAF4Q8WXU2 420 aa14.01□□□□□ -0.17
COL4A3-204ENST00000469504 DCPSQ96C86 337 aaKnown RBP14.01□□□□□ -0.17
COL4A3-204ENST00000469504 VAMP4O75379 141 aa14□□□□□ -0.17
COL4A3-204ENST00000469504 IGHMBP2P38935 993 aaKnown RBP14□□□□□ -0.17
COL4A3-204ENST00000469504 FKBP5Q13451 457 aaPredicted RBP14□□□□□ -0.17
COL4A3-204ENST00000469504 GCKRQ14397 625 aa14□□□□□ -0.17
COL4A3-204ENST00000469504 CWF19L2Q2TBE0 894 aaKnown RBP14□□□□□ -0.17
COL4A3-204ENST00000469504 RSBN1LQ6PCB5 846 aaPredicted RBP14□□□□□ -0.17
COL4A3-204ENST00000469504 COL4A1P02462 1669 aa14□□□□□ -0.17
COL4A3-204ENST00000469504 ZNF280AP59817 542 aaPredicted RBP13.99□□□□□ -0.17
COL4A3-204ENST00000469504 FMR1Q06787 632 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL4A3-204ENST00000469504 KIF4BQ2VIQ3 1234 aa13.99□□□□□ -0.17
COL4A3-204ENST00000469504 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
COL4A3-204ENST00000469504 CYP4F22Q6NT55 531 aa13.99□□□□□ -0.17
COL4A3-204ENST00000469504 SAMD7Q7Z3H4 446 aa13.99□□□□□ -0.17
COL4A3-204ENST00000469504 UBE3BQ7Z3V4 1068 aa13.99□□□□□ -0.17
COL4A3-204ENST00000469504 KRT26Q7Z3Y9 468 aa13.99□□□□□ -0.17
COL4A3-204ENST00000469504 CCDC85AQ96PX6 553 aaPredicted RBP13.99□□□□□ -0.17
COL4A3-204ENST00000469504 GREM2Q9H772 168 aa13.99□□□□□ -0.17
COL4A3-204ENST00000469504 MINPP1Q9UNW1 487 aa13.99□□□□□ -0.17
COL4A3-204ENST00000469504 LEMD3Q9Y2U8 911 aa13.99□□□□□ -0.17
COL4A3-204ENST00000469504 MYO3BQ8WXR4 1341 aa13.98□□□□□ -0.17
COL4A3-204ENST00000469504 USP17L3A6NCW0 530 aa13.98□□□□□ -0.17
COL4A3-204ENST00000469504 USP17L4A6NCW7 530 aa13.98□□□□□ -0.17
COL4A3-204ENST00000469504 CSF1RP07333 972 aa13.98□□□□□ -0.17
COL4A3-204ENST00000469504 BRPF1P55201 1214 aaPredicted RBP13.98□□□□□ -0.17
COL4A3-204ENST00000469504 G2E3Q7L622 706 aa13.98□□□□□ -0.17
COL4A3-204ENST00000469504 USP17L1Q7RTZ2 530 aa13.98□□□□□ -0.17
COL4A3-204ENST00000469504 SULF1Q8IWU6 871 aa13.98□□□□□ -0.17
COL4A3-204ENST00000469504 JARID2Q92833 1246 aaPredicted RBP13.98□□□□□ -0.17
COL4A3-204ENST00000469504 ANKRD2Q9GZV1 360 aa13.98□□□□□ -0.17
COL4A3-204ENST00000469504 PITPNM2Q9BZ72 1349 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 CACNA1FO60840 1977 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 SHTN1A0MZ66 631 aa13.97□□□□□ -0.17
COL4A3-204ENST00000469504 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms