RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PLAURQ03405 335 aa8.76□□□□□ -1.01
VPS8-219ENST00000469479 KRT25Q7Z3Z0 450 aa8.76□□□□□ -1.01
VPS8-219ENST00000469479 SMG9Q9H0W8 520 aaKnown RBP8.76□□□□□ -1.01
VPS8-219ENST00000469479 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
VPS8-219ENST00000469479 GRNP28799 593 aaKnown RBP8.75□□□□□ -1.01
VPS8-219ENST00000469479 MAP4K3Q8IVH8 894 aa8.75□□□□□ -1.01
VPS8-219ENST00000469479 IFT43Q96FT9 208 aa8.75□□□□□ -1.01
VPS8-219ENST00000469479 HINFPQ9BQA5 517 aa8.75□□□□□ -1.01
VPS8-219ENST00000469479 OAS3Q9Y6K5 1087 aaKnown RBP8.75□□□□□ -1.01
VPS8-219ENST00000469479 POM121CA8CG34 1229 aa8.74□□□□□ -1.01
VPS8-219ENST00000469479 SASH3O75995 380 aa8.74□□□□□ -1.01
VPS8-219ENST00000469479 IGFBP4P22692 258 aa8.74□□□□□ -1.01
VPS8-219ENST00000469479 MLLT1Q03111 559 aaPredicted RBP8.74□□□□□ -1.01
VPS8-219ENST00000469479 POM121Q96HA1 1249 aa8.74□□□□□ -1.01
VPS8-219ENST00000469479 KRTAP4-2Q9BYR5 136 aa8.74□□□□□ -1.01
VPS8-219ENST00000469479 RAD54L2Q9Y4B4 1467 aa8.73□□□□□ -1.01
VPS8-219ENST00000469479 F8W735 103 aaPredicted RBP8.73□□□□□ -1.01
VPS8-219ENST00000469479 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
VPS8-219ENST00000469479 GP2P55259 537 aaKnown RBP8.73□□□□□ -1.01
VPS8-219ENST00000469479 TLR7Q9NYK1 1049 aaKnown RBP8.73□□□□□ -1.01
VPS8-219ENST00000469479 ALX3O95076 343 aa8.72□□□□□ -1.01
VPS8-219ENST00000469479 RAXQ9Y2V3 346 aa8.72□□□□□ -1.01
VPS8-219ENST00000469479 MICAL2O94851 1124 aa8.71□□□□□ -1.02
VPS8-219ENST00000469479 LARP1Q6PKG0 1096 aaKnown RBP8.71□□□□□ -1.02
VPS8-219ENST00000469479 Q6ZS46 218 aa8.71□□□□□ -1.02
VPS8-219ENST00000469479 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
VPS8-219ENST00000469479 PLD4Q96BZ4 506 aa8.71□□□□□ -1.02
VPS8-219ENST00000469479 KLK14Q9P0G3 267 aa8.71□□□□□ -1.02
VPS8-219ENST00000469479 CACTIN-AS1Q8N1I8 211 aa8.7□□□□□ -1.02
VPS8-219ENST00000469479 IL22RA1Q8N6P7 574 aa8.7□□□□□ -1.02
VPS8-219ENST00000469479 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
VPS8-219ENST00000469479 LOC102724428A0A0B4J2F2 783 aa8.69□□□□□ -1.02
VPS8-219ENST00000469479 KIAA1324LA8MWY0 1029 aaPredicted RBP8.69□□□□□ -1.02
VPS8-219ENST00000469479 EGFRP00533 1210 aa8.69□□□□□ -1.02
VPS8-219ENST00000469479 IGLV1-40P01703 118 aa8.69□□□□□ -1.02
VPS8-219ENST00000469479 SIK1P57059 783 aa8.69□□□□□ -1.02
VPS8-219ENST00000469479 DGKZQ13574 1117 aa8.69□□□□□ -1.02
VPS8-219ENST00000469479 MUC3BQ9H195 1237 aa8.69□□□□□ -1.02
VPS8-219ENST00000469479 RBSNQ9H1K0 784 aa8.69□□□□□ -1.02
VPS8-219ENST00000469479 GHRHP01286 108 aa8.68□□□□□ -1.02
VPS8-219ENST00000469479 PSAPP07602 524 aa8.68□□□□□ -1.02
VPS8-219ENST00000469479 GLB1P16278 677 aa8.68□□□□□ -1.02
VPS8-219ENST00000469479 C11orf91Q3C1V1 193 aa8.68□□□□□ -1.02
VPS8-219ENST00000469479 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
VPS8-219ENST00000469479 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
VPS8-219ENST00000469479 GDF6Q6KF10 455 aaPredicted RBP8.67□□□□□ -1.02
VPS8-219ENST00000469479 RTCBQ9Y3I0 505 aaKnown RBP8.67□□□□□ -1.02
VPS8-219ENST00000469479 DHX15O43143 795 aaKnown RBP8.66□□□□□ -1.02
VPS8-219ENST00000469479 MED26O95402 600 aa8.66□□□□□ -1.02
VPS8-219ENST00000469479 UBTFP17480 764 aaKnown RBP8.66□□□□□ -1.02
VPS8-219ENST00000469479 FLIIQ13045 1269 aa8.66□□□□□ -1.02
VPS8-219ENST00000469479 INTS5Q6P9B9 1019 aaKnown RBP8.66□□□□□ -1.02
VPS8-219ENST00000469479 MYO19Q96H55 970 aa8.66□□□□□ -1.02
VPS8-219ENST00000469479 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS8-219ENST00000469479 TFIP11Q9UBB9 837 aaKnown RBP8.66□□□□□ -1.02
VPS8-219ENST00000469479 CEP170Q5SW79 1584 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 GRIN2AQ12879 1464 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 ABCC10Q5T3U5 1492 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 J3QW42 95 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 OPLAHO14841 1288 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 FOXO3O43524 673 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 XYLBO75191 536 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 HOXD8P13378 290 aaPredicted RBP8.65□□□□□ -1.02
VPS8-219ENST00000469479 SOX18P35713 384 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 GRIK1P39086 918 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 DPYDQ12882 1025 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 VTI1AQ96AJ9 217 aa8.65□□□□□ -1.02
VPS8-219ENST00000469479 MAFBQ9Y5Q3 323 aaPredicted RBP8.65□□□□□ -1.02
VPS8-219ENST00000469479 NUP160Q12769 1436 aa8.64□□□□□ -1.03
VPS8-219ENST00000469479 KIF13AQ9H1H9 1805 aa8.64□□□□□ -1.03
VPS8-219ENST00000469479 TGFB1P01137 390 aa8.64□□□□□ -1.03
VPS8-219ENST00000469479 JAG1P78504 1218 aa8.64□□□□□ -1.03
VPS8-219ENST00000469479 PTK7Q13308 1070 aa8.64□□□□□ -1.03
VPS8-219ENST00000469479 CEP41Q9BYV8 373 aa8.64□□□□□ -1.03
VPS8-219ENST00000469479 QTRT2Q9H974 415 aaKnown RBP8.64□□□□□ -1.03
VPS8-219ENST00000469479 MAPKBP1O60336 1514 aa8.64□□□□□ -1.03
VPS8-219ENST00000469479 PBRM1Q86U86 1689 aa8.63□□□□□ -1.03
VPS8-219ENST00000469479 KDM6BO15054 1643 aa8.63□□□□□ -1.03
VPS8-219ENST00000469479 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
VPS8-219ENST00000469479 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.63□□□□□ -1.03
VPS8-219ENST00000469479 AGGF1Q8N302 714 aaeCLIP8.63□□□□□ -1.03
VPS8-219ENST00000469479 UBL7Q96S82 380 aaPredicted RBP8.63□□□□□ -1.03
VPS8-219ENST00000469479 PPME1Q9Y570 386 aa8.63□□□□□ -1.03
VPS8-219ENST00000469479 ERCC6L2Q5T890 1561 aa8.63□□□□□ -1.03
VPS8-219ENST00000469479 SHROOM2Q13796 1616 aa8.62□□□□□ -1.03
VPS8-219ENST00000469479 MMP20O60882 483 aa8.62□□□□□ -1.03
VPS8-219ENST00000469479 UVSSAQ2YD98 709 aa8.62□□□□□ -1.03
VPS8-219ENST00000469479 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
VPS8-219ENST00000469479 CRTC2Q53ET0 693 aaPredicted RBP8.62□□□□□ -1.03
VPS8-219ENST00000469479 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
VPS8-219ENST00000469479 CMTR1Q8N1G2 835 aaKnown RBP8.62□□□□□ -1.03
VPS8-219ENST00000469479 ABCA10Q8WWZ4 1543 aa8.62□□□□□ -1.03
VPS8-219ENST00000469479 CUX1P39880 1505 aa8.61□□□□□ -1.03
VPS8-219ENST00000469479 LGR5O75473 907 aa8.61□□□□□ -1.03
VPS8-219ENST00000469479 WEE1P30291 646 aa8.61□□□□□ -1.03
VPS8-219ENST00000469479 ZDHHC13Q8IUH4 622 aa8.61□□□□□ -1.03
VPS8-219ENST00000469479 NSUN5Q96P11 429 aaKnown RBP8.61□□□□□ -1.03
VPS8-219ENST00000469479 FAM196BA6NMK8 535 aa8.6□□□□□ -1.03
VPS8-219ENST00000469479 NFIAQ12857 509 aa8.6□□□□□ -1.03
VPS8-219ENST00000469479 RGL4Q8IZJ4 473 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms