RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ANKRD1Q15327 319 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 HSP90B2PQ58FF3 399 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 TMC6Q7Z403 805 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 RASEFQ8IZ41 740 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 DDX11Q96FC9 970 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 GGNBP2Q9H3C7 697 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 ADCY9O60503 1353 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 CCDC189A1A4V9 331 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 FYB1O15117 783 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 ERLIN2O94905 339 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 HSP90B1P14625 803 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 KRT24Q2M2I5 525 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 AOPEPQ8N6M6 819 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 RUFY2Q8WXA3 655 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 ALDH8A1Q9H2A2 487 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 RAB21Q9UL25 225 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 RPGRIP1LQ68CZ1 1315 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 XRN1Q8IZH2 1706 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 TUBB2AQ13885 445 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 ME3Q16798 604 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 TSHZ3Q63HK5 1081 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 CCDC73Q6ZRK6 1079 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 EP400NLQ6ZTU2 488 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 UNC5CLQ8IV45 518 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 CNTROBQ8N137 903 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 TBC1D22AQ8WUA7 517 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 THUMPD2Q9BTF0 503 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 TUBB2BQ9BVA1 445 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 IL25Q9H293 177 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 PDE11AQ9HCR9 933 aa10.45□□□□□ -0.74
SMARCE1-207ENST00000469334 PATL2C9JE40 543 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 KINO60870 393 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 MNAT1P51948 309 aa10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 BEND6Q5SZJ8 279 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 ATL3Q6DD88 541 aa10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 SAMD1Q6SPF0 538 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 MICALL1Q8N3F8 863 aa10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 MSANTD4Q8NCY6 345 aa10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 JAKMIP1Q96N16 626 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 AKAP2Q9Y2D5 859 aa10.44□□□□□ -0.74
SMARCE1-207ENST00000469334 ATP8B2P98198 1209 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 LRCH2Q5VUJ6 765 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 TTLL5Q6EMB2 1281 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 FERMT3Q86UX7 667 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 PHACTR3Q96KR7 559 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 XPO4Q9C0E2 1151 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 FAN1Q9Y2M0 1017 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 ATXN2Q99700 1313 aaKnown RBP10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 ATP7AQ04656 1500 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 ARHGAP6O43182 974 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 CBFA2T2O43439 604 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 RAB11FIP3O75154 756 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 PSMA5P28066 241 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 CNNM3Q8NE01 707 aa10.43□□□□□ -0.74
SMARCE1-207ENST00000469334 TMCO5BA8MYB1 307 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 MYO1BO43795 1136 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 ZKSCAN1P17029 563 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 ERCC3P19447 782 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 FAM160A1Q05DH4 1040 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 RESTQ13127 1097 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 CEP112Q8N8E3 955 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 CTCFLQ8NI51 663 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 ERCC4Q92889 916 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 IFNKQ9P0W0 207 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 TFIP11Q9UBB9 837 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 SOS1Q07889 1333 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 PXDNLA1KZ92 1463 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 ABCC6O95255 1503 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 FAM208AQ9UK61 1670 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 VWA3AA6NCI4 1184 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 HNRNPH1P31943 449 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 DDR1Q08345 913 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 EFCAB2Q5VUJ9 269 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 FAM173BQ6P4H8 233 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 CCAR1Q8IX12 1150 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 GIMAP7Q8NHV1 300 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 VIPAS39Q9H9C1 493 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 GNL3LQ9NVN8 582 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 L1RE1Q9UN81 338 aa10.42□□□□□ -0.74
SMARCE1-207ENST00000469334 FANCGO15287 622 aa10.41□□□□□ -0.74
SMARCE1-207ENST00000469334 GBP6Q6ZN66 633 aa10.41□□□□□ -0.74
SMARCE1-207ENST00000469334 SRGAP1Q7Z6B7 1085 aa10.41□□□□□ -0.74
SMARCE1-207ENST00000469334 JMYQ8N9B5 988 aa10.41□□□□□ -0.74
SMARCE1-207ENST00000469334 AFAP1L1Q8TED9 768 aa10.41□□□□□ -0.74
SMARCE1-207ENST00000469334 LARP6Q9BRS8 491 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-207ENST00000469334 PIK3C2BO00750 1634 aa10.41□□□□□ -0.74
SMARCE1-207ENST00000469334 GOLIM4O00461 696 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 CHMP4BP1P59074 171 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 MAP2K1Q02750 393 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 NEDD9Q14511 834 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 MCM6Q14566 821 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 C11orf91Q3C1V1 193 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 LARP1Q6PKG0 1096 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 NRKQ7Z2Y5 1582 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 HDGFL2Q7Z4V5 671 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 PI4K2BQ8TCG2 481 aa10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-207ENST00000469334 KIFC2Q96AC6 838 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms