RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
HDAC6-217ENST00000469223 PARP10Q53GL7 1025 aa16.87■□□□□ 0.29
HDAC6-217ENST00000469223 DDX46Q7L014 1031 aaKnown RBP16.87■□□□□ 0.29
HDAC6-217ENST00000469223 ARMC5Q96C12 935 aa16.87■□□□□ 0.29
HDAC6-217ENST00000469223 UTP14AQ9BVJ6 771 aaKnown RBP16.87■□□□□ 0.29
HDAC6-217ENST00000469223 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-217ENST00000469223 PRKAR2BP31323 418 aa16.86■□□□□ 0.29
HDAC6-217ENST00000469223 GIGYF2Q6Y7W6 1299 aaKnown RBP16.86■□□□□ 0.29
HDAC6-217ENST00000469223 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-217ENST00000469223 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
HDAC6-217ENST00000469223 SLC10A5Q5PT55 438 aa16.85■□□□□ 0.29
HDAC6-217ENST00000469223 PTPN22Q9Y2R2 807 aa16.85■□□□□ 0.29
HDAC6-217ENST00000469223 C6orf229H3BNL8 230 aa16.84■□□□□ 0.29
HDAC6-217ENST00000469223 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
HDAC6-217ENST00000469223 RTF1Q92541 710 aaKnown RBP16.84■□□□□ 0.29
HDAC6-217ENST00000469223 RBM27Q9P2N5 1060 aaKnown RBP16.84■□□□□ 0.29
HDAC6-217ENST00000469223 PITPNM2Q9BZ72 1349 aa16.84■□□□□ 0.29
HDAC6-217ENST00000469223 ZNF280AP59817 542 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-217ENST00000469223 CD99L2Q8TCZ2 262 aa16.83■□□□□ 0.28
HDAC6-217ENST00000469223 MIS18AQ9NYP9 233 aa16.83■□□□□ 0.28
HDAC6-217ENST00000469223 VIL1P09327 827 aaKnown RBP16.82■□□□□ 0.28
HDAC6-217ENST00000469223 TMC4Q7Z404 712 aa16.82■□□□□ 0.28
HDAC6-217ENST00000469223 CCER1Q8TC90 406 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-217ENST00000469223 TMEM106CQ9BVX2 250 aa16.82■□□□□ 0.28
HDAC6-217ENST00000469223 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
HDAC6-217ENST00000469223 POLLQ9UGP5 575 aa16.82■□□□□ 0.28
HDAC6-217ENST00000469223 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
HDAC6-217ENST00000469223 ZSWIM8A7E2V4 1837 aa16.82■□□□□ 0.28
HDAC6-217ENST00000469223 ALDH1A1P00352 501 aa16.81■□□□□ 0.28
HDAC6-217ENST00000469223 TCIRG1Q13488 830 aa16.81■□□□□ 0.28
HDAC6-217ENST00000469223 ERO1AQ96HE7 468 aa16.81■□□□□ 0.28
HDAC6-217ENST00000469223 ZNF333Q96JL9 665 aa16.81■□□□□ 0.28
HDAC6-217ENST00000469223 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
HDAC6-217ENST00000469223 MNX1P50219 401 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-217ENST00000469223 GPSM2P81274 684 aa16.8■□□□□ 0.28
HDAC6-217ENST00000469223 EYA3Q99504 573 aa16.8■□□□□ 0.28
HDAC6-217ENST00000469223 MYOZ2Q9NPC6 264 aa16.8■□□□□ 0.28
HDAC6-217ENST00000469223 PTPN12Q05209 780 aaKnown RBP16.79■□□□□ 0.28
HDAC6-217ENST00000469223 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
HDAC6-217ENST00000469223 SPRYD7Q5W111 196 aa16.79■□□□□ 0.28
HDAC6-217ENST00000469223 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
HDAC6-217ENST00000469223 VCANP13611 3396 aa16.78■□□□□ 0.28
HDAC6-217ENST00000469223 NF2P35240 595 aa16.78■□□□□ 0.28
HDAC6-217ENST00000469223 CAP1Q01518 475 aa16.78■□□□□ 0.28
HDAC6-217ENST00000469223 PRKG1Q13976 671 aa16.78■□□□□ 0.28
HDAC6-217ENST00000469223 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-217ENST00000469223 RSBN1LQ6PCB5 846 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-217ENST00000469223 IFNL1Q8IU54 200 aa16.78■□□□□ 0.28
HDAC6-217ENST00000469223 CELF1Q92879 486 aaKnown RBP16.78■□□□□ 0.28
HDAC6-217ENST00000469223 OTOFQ9HC10 1997 aa16.78■□□□□ 0.28
HDAC6-217ENST00000469223 IGF2BP3O00425 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
HDAC6-217ENST00000469223 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
HDAC6-217ENST00000469223 AGBL3Q8NEM8 1001 aa16.77■□□□□ 0.28
HDAC6-217ENST00000469223 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
HDAC6-217ENST00000469223 THUMPD2Q9BTF0 503 aaKnown RBP16.77■□□□□ 0.28
HDAC6-217ENST00000469223 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
HDAC6-217ENST00000469223 MYCP01106 439 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-217ENST00000469223 SLC9C1Q4G0N8 1177 aa16.76■□□□□ 0.27
HDAC6-217ENST00000469223 NLRP10Q86W26 655 aa16.76■□□□□ 0.27
HDAC6-217ENST00000469223 ZNF428Q96B54 188 aa16.76■□□□□ 0.27
HDAC6-217ENST00000469223 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-217ENST00000469223 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
HDAC6-217ENST00000469223 SPTBN5Q9NRC6 3674 aaKnown RBP16.76■□□□□ 0.27
HDAC6-217ENST00000469223 ECM29Q5VYK3 1845 aa16.75■□□□□ 0.27
HDAC6-217ENST00000469223 MANSC4A6NHS7 340 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-217ENST00000469223 USP17L8P0C7I0 530 aa16.75■□□□□ 0.27
HDAC6-217ENST00000469223 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
HDAC6-217ENST00000469223 CRHR2Q13324 411 aa16.75■□□□□ 0.27
HDAC6-217ENST00000469223 NBPF9Q3BBW0 867 aa16.75■□□□□ 0.27
HDAC6-217ENST00000469223 ERBB4Q15303 1308 aa16.74■□□□□ 0.27
HDAC6-217ENST00000469223 G3V3G9 751 aa16.74■□□□□ 0.27
HDAC6-217ENST00000469223 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
HDAC6-217ENST00000469223 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
HDAC6-217ENST00000469223 ARMC9Q7Z3E5 817 aa16.74■□□□□ 0.27
HDAC6-217ENST00000469223 GMLQ99445 158 aa16.74■□□□□ 0.27
HDAC6-217ENST00000469223 ZC3H12CQ9C0D7 883 aaKnown RBP16.74■□□□□ 0.27
HDAC6-217ENST00000469223 FZD1Q9UP38 647 aa16.74■□□□□ 0.27
HDAC6-217ENST00000469223 PTCH2Q9Y6C5 1203 aa16.74■□□□□ 0.27
HDAC6-217ENST00000469223 SPEF2Q9C093 1822 aa16.74■□□□□ 0.27
HDAC6-217ENST00000469223 SOX1O00570 391 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-217ENST00000469223 UFL1O94874 794 aa16.73■□□□□ 0.27
HDAC6-217ENST00000469223 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-217ENST00000469223 PRO3102Q9H379 93 aa16.73■□□□□ 0.27
HDAC6-217ENST00000469223 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
HDAC6-217ENST00000469223 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
HDAC6-217ENST00000469223 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
HDAC6-217ENST00000469223 ANXA1P04083 346 aa16.72■□□□□ 0.27
HDAC6-217ENST00000469223 PROSER3Q2NL68 480 aa16.72■□□□□ 0.27
HDAC6-217ENST00000469223 LRP10Q7Z4F1 713 aa16.72■□□□□ 0.27
HDAC6-217ENST00000469223 DPF3Q92784 378 aa16.72■□□□□ 0.27
HDAC6-217ENST00000469223 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
HDAC6-217ENST00000469223 SASH1O94885 1247 aa16.71■□□□□ 0.27
HDAC6-217ENST00000469223 SP3Q02447 781 aa16.71■□□□□ 0.27
HDAC6-217ENST00000469223 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
HDAC6-217ENST00000469223 LRCH3Q96II8 777 aa16.71■□□□□ 0.27
HDAC6-217ENST00000469223 WNK4Q96J92 1243 aa16.71■□□□□ 0.27
HDAC6-217ENST00000469223 HTATSF1O43719 755 aaKnown RBP16.7■□□□□ 0.26
HDAC6-217ENST00000469223 ZBTB48P10074 688 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-217ENST00000469223 INHBEP58166 350 aa16.7■□□□□ 0.26
HDAC6-217ENST00000469223 HSP90AB3PQ58FF7 597 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms