RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 ATG3Q9NT62 314 aa16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 TLR7Q9NYK1 1049 aaKnown RBP16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 RFX7Q2KHR2 1363 aa16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 ITGB4P16144 1822 aa16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 SNRPA1P09661 255 aaKnown RBP16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 BOLA2Q9H3K6 86 aa16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 DOT1LQ8TEK3 1739 aa16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 CCDC192P0DO97 292 aa16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 TSGA10IPQ3SY00 556 aa16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-205ENST00000469154 TPM3P06753 285 aa16.84■□□□□ 0.29
SMARCD3-205ENST00000469154 SIL1Q9H173 461 aa16.84■□□□□ 0.29
SMARCD3-205ENST00000469154 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
SMARCD3-205ENST00000469154 MTERF4Q7Z6M4 381 aaKnown RBP16.84■□□□□ 0.29
SMARCD3-205ENST00000469154 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
SMARCD3-205ENST00000469154 ARFGEF2Q9Y6D5 1785 aa16.83■□□□□ 0.29
SMARCD3-205ENST00000469154 GCKRQ14397 625 aa16.83■□□□□ 0.28
SMARCD3-205ENST00000469154 KRT32Q14532 448 aa16.83■□□□□ 0.28
SMARCD3-205ENST00000469154 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
SMARCD3-205ENST00000469154 TTC6Q86TZ1 520 aa16.83■□□□□ 0.28
SMARCD3-205ENST00000469154 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
SMARCD3-205ENST00000469154 RBM10P98175 930 aaKnown RBP16.82■□□□□ 0.28
SMARCD3-205ENST00000469154 NOLC1Q14978 699 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMARCD3-205ENST00000469154 SCAND2PQ9GZW5 306 aaPredicted RBP16.82■□□□□ 0.28
SMARCD3-205ENST00000469154 COPRSQ9NQ92 184 aa16.82■□□□□ 0.28
SMARCD3-205ENST00000469154 KCPQ6ZWJ8 1503 aa16.82■□□□□ 0.28
SMARCD3-205ENST00000469154 COL15A1P39059 1388 aa16.82■□□□□ 0.28
SMARCD3-205ENST00000469154 TOB2Q14106 344 aaPredicted RBP16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 DNTTIP2Q5QJE6 756 aaKnown RBP16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 PRIMPOLQ96LW4 560 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 NUP62CLQ9H1M0 184 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 MYH15Q9Y2K3 1946 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 EP400Q96L91 3159 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 LAMB4A4D0S4 1761 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 ATP5JP18859 108 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 RXRBP28702 533 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 USPL1Q5W0Q7 1092 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 PTF1AQ7RTS3 328 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 MYD88Q99836 296 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
SMARCD3-205ENST00000469154 TAF5LO75529 589 aa16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 ZNF830Q96NB3 372 aaPredicted RBP16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 TTC12Q9H892 705 aaPredicted RBP16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 SPTLC3Q9NUV7 552 aa16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 GOLGA6L6A8MZA4 724 aa16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 HMGN5P82970 282 aaKnown RBP16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 ZNF589Q86UQ0 364 aaPredicted RBP16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 MYRIPQ8NFW9 859 aa16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 FAM200AQ8TCP9 573 aa16.8■□□□□ 0.28
SMARCD3-205ENST00000469154 DTNBO60941 627 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 MYL6BP14649 208 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 KRT27Q7Z3Y8 459 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 FERMT3Q86UX7 667 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 KLHDC4Q8TBB5 520 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 EPHA10Q5JZY3 1008 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 DDX19AQ9NUU7 478 aaKnown RBP16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
SMARCD3-205ENST00000469154 PLCB2Q00722 1185 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 TNNI3KQ59H18 835 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 MPNDQ8N594 471 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 SPATA32Q96LK8 384 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 TCEANC2Q96MN5 208 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 FPGT-TNNI3KV9GXZ4 949 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 RFX5P48382 616 aaPredicted RBP16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 DBNLQ9UJU6 430 aaKnown RBP16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
SMARCD3-205ENST00000469154 LIG1P18858 919 aa16.77■□□□□ 0.28
SMARCD3-205ENST00000469154 TYRO3Q06418 890 aa16.77■□□□□ 0.28
SMARCD3-205ENST00000469154 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
SMARCD3-205ENST00000469154 ANKRD13DQ6ZTN6 518 aa16.77■□□□□ 0.28
SMARCD3-205ENST00000469154 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.28
SMARCD3-205ENST00000469154 GTF3C6Q969F1 213 aa16.77■□□□□ 0.28
SMARCD3-205ENST00000469154 AP5Z1O43299 807 aa16.77■□□□□ 0.27
SMARCD3-205ENST00000469154 RABL6Q3YEC7 729 aaPredicted RBP16.77■□□□□ 0.27
SMARCD3-205ENST00000469154 NEK1Q96PY6 1258 aa16.77■□□□□ 0.27
SMARCD3-205ENST00000469154 TNMDQ9H2S6 317 aa16.77■□□□□ 0.27
SMARCD3-205ENST00000469154 MRVI1Q9Y6F6 885 aa16.77■□□□□ 0.27
SMARCD3-205ENST00000469154 VSIG10Q8N0Z9 540 aa16.76■□□□□ 0.27
SMARCD3-205ENST00000469154 LEO1Q8WVC0 666 aaPredicted RBP16.76■□□□□ 0.27
SMARCD3-205ENST00000469154 ZNF609O15014 1411 aa16.76■□□□□ 0.27
SMARCD3-205ENST00000469154 A1BGP04217 495 aa16.76■□□□□ 0.27
SMARCD3-205ENST00000469154 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
SMARCD3-205ENST00000469154 TFCP2Q12800 502 aa16.76■□□□□ 0.27
SMARCD3-205ENST00000469154 STK3Q13188 491 aa16.76■□□□□ 0.27
SMARCD3-205ENST00000469154 CLSTN2Q9H4D0 955 aa16.76■□□□□ 0.27
SMARCD3-205ENST00000469154 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
SMARCD3-205ENST00000469154 FAM173BQ6P4H8 233 aa16.75■□□□□ 0.27
SMARCD3-205ENST00000469154 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms