RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 MYH3P11055 1940 aa27.86■■■□□ 2.05
TTC28-204ENST00000468807 ECE2O60344 883 aa27.85■■■□□ 2.05
TTC28-204ENST00000468807 FMR1Q06787 632 aaKnown RBP eCLIP27.85■■■□□ 2.05
TTC28-204ENST00000468807 GGA1Q9UJY5 639 aa27.85■■■□□ 2.05
TTC28-204ENST00000468807 CACNA1FO60840 1977 aa27.84■■■□□ 2.05
TTC28-204ENST00000468807 TRAF5O00463 557 aa27.84■■■□□ 2.05
TTC28-204ENST00000468807 PSMD14O00487 310 aa27.84■■■□□ 2.05
TTC28-204ENST00000468807 VAMP4O75379 141 aa27.84■■■□□ 2.05
TTC28-204ENST00000468807 UBE3BQ7Z3V4 1068 aa27.84■■■□□ 2.05
TTC28-204ENST00000468807 CNOT7Q9UIV1 285 aaKnown RBP27.84■■■□□ 2.05
TTC28-204ENST00000468807 SPEF2Q9C093 1822 aa27.83■■■□□ 2.05
TTC28-204ENST00000468807 MICALL2Q8IY33 904 aa27.83■■■□□ 2.05
TTC28-204ENST00000468807 CDC5LQ99459 802 aaKnown RBP27.83■■■□□ 2.05
TTC28-204ENST00000468807 PODXL2Q9NZ53 605 aa27.83■■■□□ 2.05
TTC28-204ENST00000468807 SHTN1A0MZ66 631 aa27.82■■■□□ 2.04
TTC28-204ENST00000468807 H7C1D1 291 aa27.82■■■□□ 2.04
TTC28-204ENST00000468807 VEGFBP49765 207 aa27.82■■■□□ 2.04
TTC28-204ENST00000468807 COL13A1Q5TAT6 717 aaPredicted RBP27.82■■■□□ 2.04
TTC28-204ENST00000468807 TTLL11Q8NHH1 800 aa27.82■■■□□ 2.04
TTC28-204ENST00000468807 DNAAF4Q8WXU2 420 aa27.82■■■□□ 2.04
TTC28-204ENST00000468807 MYH16Q9H6N6 1097 aa27.82■■■□□ 2.04
TTC28-204ENST00000468807 SPINK5Q9NQ38 1064 aaPredicted RBP27.82■■■□□ 2.04
TTC28-204ENST00000468807 DEFB115Q30KQ5 88 aa27.81■■■□□ 2.04
TTC28-204ENST00000468807 TRPM4Q8TD43 1214 aa27.81■■■□□ 2.04
TTC28-204ENST00000468807 GREM2Q9H772 168 aa27.81■■■□□ 2.04
TTC28-204ENST00000468807 KCNQ5Q9NR82 932 aa27.81■■■□□ 2.04
TTC28-204ENST00000468807 TRPM7Q96QT4 1865 aa27.81■■■□□ 2.04
TTC28-204ENST00000468807 GCKRQ14397 625 aa27.8■■■□□ 2.04
TTC28-204ENST00000468807 XDHP47989 1333 aa27.79■■■□□ 2.04
TTC28-204ENST00000468807 H7C1W4 665 aa27.79■■■□□ 2.04
TTC28-204ENST00000468807 PAXIP1Q6ZW49 1069 aaPredicted RBP27.79■■■□□ 2.04
TTC28-204ENST00000468807 HIRAP54198 1017 aaPredicted RBP27.78■■■□□ 2.04
TTC28-204ENST00000468807 GLIS2Q9BZE0 524 aaPredicted RBP27.78■■■□□ 2.04
TTC28-204ENST00000468807 RTL9Q8NET4 1388 aa27.77■■■□□ 2.04
TTC28-204ENST00000468807 RASSF10A6NK89 507 aa27.77■■■□□ 2.04
TTC28-204ENST00000468807 LINS1Q8NG48 757 aa27.77■■■□□ 2.04
TTC28-204ENST00000468807 DPF2Q92785 391 aa27.77■■■□□ 2.04
TTC28-204ENST00000468807 SCN9AQ15858 1988 aa27.77■■■□□ 2.04
TTC28-204ENST00000468807 ATP2B4P23634 1241 aa27.76■■■□□ 2.03
TTC28-204ENST00000468807 TBC1D10BQ4KMP7 808 aaPredicted RBP27.76■■■□□ 2.03
TTC28-204ENST00000468807 SAMD7Q7Z3H4 446 aa27.76■■■□□ 2.03
TTC28-204ENST00000468807 ZNF408Q9H9D4 720 aa27.76■■■□□ 2.03
TTC28-204ENST00000468807 RPS12P25398 132 aaKnown RBP27.75■■■□□ 2.03
TTC28-204ENST00000468807 GRM1Q13255 1194 aa27.75■■■□□ 2.03
TTC28-204ENST00000468807 RBM26Q5T8P6 1007 aaKnown RBP27.75■■■□□ 2.03
TTC28-204ENST00000468807 CST9Q5W186 159 aa27.75■■■□□ 2.03
TTC28-204ENST00000468807 ZC3H15Q8WU90 426 aaKnown RBP27.75■■■□□ 2.03
TTC28-204ENST00000468807 F6X3S4 739 aa27.74■■■□□ 2.03
TTC28-204ENST00000468807 CELF2O95319 508 aaKnown RBP27.74■■■□□ 2.03
TTC28-204ENST00000468807 IGHMBP2P38935 993 aaKnown RBP27.74■■■□□ 2.03
TTC28-204ENST00000468807 AIDAQ96BJ3 306 aa27.74■■■□□ 2.03
TTC28-204ENST00000468807 BSDC1Q9NW68 430 aaPredicted RBP27.74■■■□□ 2.03
TTC28-204ENST00000468807 MINPP1Q9UNW1 487 aa27.74■■■□□ 2.03
TTC28-204ENST00000468807 WDR33Q9C0J8 1336 aaKnown RBP27.73■■■□□ 2.03
TTC28-204ENST00000468807 FAM161AQ3B820 660 aa27.73■■■□□ 2.03
TTC28-204ENST00000468807 PGAP2Q9UHJ9 254 aa27.73■■■□□ 2.03
TTC28-204ENST00000468807 ITGA6P23229 1130 aa27.72■■■□□ 2.03
TTC28-204ENST00000468807 CDC37L1Q7L3B6 337 aa27.72■■■□□ 2.03
TTC28-204ENST00000468807 EGFRP00533 1210 aa27.71■■■□□ 2.03
TTC28-204ENST00000468807 VIL1P09327 827 aaKnown RBP27.71■■■□□ 2.03
TTC28-204ENST00000468807 TNS4Q8IZW8 715 aa27.71■■■□□ 2.03
TTC28-204ENST00000468807 PLA2G12BQ9BX93 195 aa27.71■■■□□ 2.03
TTC28-204ENST00000468807 WTIPA6NIX2 430 aaPredicted RBP27.7■■■□□ 2.02
TTC28-204ENST00000468807 FOXN1O15353 648 aa27.7■■■□□ 2.02
TTC28-204ENST00000468807 CASP7P55210 303 aa27.7■■■□□ 2.02
TTC28-204ENST00000468807 MPHOSPH8Q99549 860 aa27.7■■■□□ 2.02
TTC28-204ENST00000468807 CYP4F22Q6NT55 531 aa27.69■■■□□ 2.02
TTC28-204ENST00000468807 USP48Q86UV5 1035 aa27.69■■■□□ 2.02
TTC28-204ENST00000468807 CHMP3Q9Y3E7 222 aa27.69■■■□□ 2.02
TTC28-204ENST00000468807 TLL2Q9Y6L7 1015 aa27.69■■■□□ 2.02
TTC28-204ENST00000468807 ECE1P42892 770 aa27.68■■■□□ 2.02
TTC28-204ENST00000468807 CCT4P50991 539 aaKnown RBP27.68■■■□□ 2.02
TTC28-204ENST00000468807 KIF4BQ2VIQ3 1234 aa27.68■■■□□ 2.02
TTC28-204ENST00000468807 CAPNS2Q96L46 248 aa27.68■■■□□ 2.02
TTC28-204ENST00000468807 BEND3Q5T5X7 828 aa27.67■■■□□ 2.02
TTC28-204ENST00000468807 RSBN1LQ6PCB5 846 aaPredicted RBP27.67■■■□□ 2.02
TTC28-204ENST00000468807 SLC4A10Q6U841 1118 aa27.67■■■□□ 2.02
TTC28-204ENST00000468807 FBXW7Q969H0 707 aa27.67■■■□□ 2.02
TTC28-204ENST00000468807 MED23Q9ULK4 1368 aa27.67■■■□□ 2.02
TTC28-204ENST00000468807 POLR2AP24928 1970 aaKnown RBP27.67■■■□□ 2.02
TTC28-204ENST00000468807 PSME4Q14997 1843 aa27.67■■■□□ 2.02
TTC28-204ENST00000468807 CSF1RP07333 972 aa27.66■■■□□ 2.02
TTC28-204ENST00000468807 KRT26Q7Z3Y9 468 aa27.66■■■□□ 2.02
TTC28-204ENST00000468807 PODNQ7Z5L7 613 aa27.66■■■□□ 2.02
TTC28-204ENST00000468807 DCPSQ96C86 337 aaKnown RBP27.66■■■□□ 2.02
TTC28-204ENST00000468807 ANKRD18BA2A2Z9 1011 aa27.65■■■□□ 2.02
TTC28-204ENST00000468807 USP17L3A6NCW0 530 aa27.65■■■□□ 2.02
TTC28-204ENST00000468807 USP17L4A6NCW7 530 aa27.65■■■□□ 2.02
TTC28-204ENST00000468807 DLK2Q6UY11 383 aa27.65■■■□□ 2.02
TTC28-204ENST00000468807 USP17L1Q7RTZ2 530 aa27.65■■■□□ 2.02
TTC28-204ENST00000468807 WBP1LQ9NX94 342 aa27.65■■■□□ 2.02
TTC28-204ENST00000468807 ZNF521Q96K83 1311 aa27.65■■■□□ 2.02
TTC28-204ENST00000468807 KCNJ4P48050 445 aa27.64■■■□□ 2.02
TTC28-204ENST00000468807 SAPCD2Q86UD0 394 aa27.64■■■□□ 2.02
TTC28-204ENST00000468807 AGBL3Q8NEM8 1001 aa27.64■■■□□ 2.02
TTC28-204ENST00000468807 ANKRD2Q9GZV1 360 aa27.64■■■□□ 2.02
TTC28-204ENST00000468807 LEMD3Q9Y2U8 911 aa27.64■■■□□ 2.02
TTC28-204ENST00000468807 MAP2K1Q02750 393 aaPredicted RBP27.63■■■□□ 2.01
TTC28-204ENST00000468807 IFIT5Q13325 482 aaKnown RBP27.63■■■□□ 2.01
TTC28-204ENST00000468807 ZNF804BA4D1E1 1349 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms