RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
MSX1-202ENST00000468421 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
MSX1-202ENST00000468421 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
MSX1-202ENST00000468421 CEP126Q9P2H0 1117 aa13.22□□□□□ -0.29
MSX1-202ENST00000468421 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
MSX1-202ENST00000468421 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
MSX1-202ENST00000468421 ZBTB7AO95365 584 aa13.21□□□□□ -0.29
MSX1-202ENST00000468421 IFIT2P09913 472 aaKnown RBP13.21□□□□□ -0.29
MSX1-202ENST00000468421 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
MSX1-202ENST00000468421 TTC22Q5TAA0 569 aa13.21□□□□□ -0.29
MSX1-202ENST00000468421 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.29
MSX1-202ENST00000468421 SLC51AQ86UW1 340 aa13.21□□□□□ -0.29
MSX1-202ENST00000468421 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
MSX1-202ENST00000468421 HELBQ8NG08 1087 aaPredicted RBP13.21□□□□□ -0.29
MSX1-202ENST00000468421 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
MSX1-202ENST00000468421 BRIP1Q9BX63 1249 aa13.21□□□□□ -0.29
MSX1-202ENST00000468421 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
MSX1-202ENST00000468421 GPR108Q9NPR9 543 aa13.21□□□□□ -0.29
MSX1-202ENST00000468421 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
MSX1-202ENST00000468421 DBNLQ9UJU6 430 aaKnown RBP13.21□□□□□ -0.29
MSX1-202ENST00000468421 AOX1Q06278 1338 aa13.2□□□□□ -0.3
MSX1-202ENST00000468421 LTBP1Q14766 1721 aa13.2□□□□□ -0.3
MSX1-202ENST00000468421 RPS8P62241 208 aaKnown RBP13.2□□□□□ -0.3
MSX1-202ENST00000468421 GRAPQ13588 217 aa13.2□□□□□ -0.3
MSX1-202ENST00000468421 GRAPLQ8TC17 118 aaPredicted RBP13.2□□□□□ -0.3
MSX1-202ENST00000468421 PI4K2BQ8TCG2 481 aa13.2□□□□□ -0.3
MSX1-202ENST00000468421 DBNDD2Q9BQY9 259 aa13.2□□□□□ -0.3
MSX1-202ENST00000468421 BSDC1Q9NW68 430 aaPredicted RBP13.2□□□□□ -0.3
MSX1-202ENST00000468421 MROH5Q6ZUA9 1318 aa13.19□□□□□ -0.3
MSX1-202ENST00000468421 A0A1B0GUL7 405 aa13.19□□□□□ -0.3
MSX1-202ENST00000468421 TAF5LO75529 589 aa13.19□□□□□ -0.3
MSX1-202ENST00000468421 HOXA10P31260 410 aaPredicted RBP13.19□□□□□ -0.3
MSX1-202ENST00000468421 TIMM10P62072 90 aa13.19□□□□□ -0.3
MSX1-202ENST00000468421 CHRNDQ07001 517 aa13.19□□□□□ -0.3
MSX1-202ENST00000468421 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
MSX1-202ENST00000468421 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
MSX1-202ENST00000468421 AKAP11Q9UKA4 1901 aa13.19□□□□□ -0.3
MSX1-202ENST00000468421 SLX4Q8IY92 1834 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 TTC41PQ6P2S7 1318 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 MYH13Q9UKX3 1938 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 SNAP23O00161 211 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 PDE8BO95263 885 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 SRGNP10124 158 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 FGFR2P21802 821 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 ADORA1P30542 326 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 PDE6BP35913 854 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 ATP2B3Q16720 1220 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 BMP2KLQ5H9B9 411 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 NEUROD6Q96NK8 337 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 CRAMP1Q96RY5 1269 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 MTFR1LQ9H019 292 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 MINPP1Q9UNW1 487 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 AKAP2Q9Y2D5 859 aa13.18□□□□□ -0.3
MSX1-202ENST00000468421 BRCA1P38398 1863 aaKnown RBP13.17□□□□□ -0.3
MSX1-202ENST00000468421 C8orf34Q49A92 452 aa13.17□□□□□ -0.3
MSX1-202ENST00000468421 ECHDC1Q9NTX5 307 aa13.17□□□□□ -0.3
MSX1-202ENST00000468421 NPR1P16066 1061 aa13.16□□□□□ -0.3
MSX1-202ENST00000468421 CHRNA5P30532 468 aa13.16□□□□□ -0.3
MSX1-202ENST00000468421 PUM3Q15397 648 aaKnown RBP13.16□□□□□ -0.3
MSX1-202ENST00000468421 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
MSX1-202ENST00000468421 XAGE2Q96GT9 111 aa13.16□□□□□ -0.3
MSX1-202ENST00000468421 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
MSX1-202ENST00000468421 SGIP1Q9BQI5 828 aa13.16□□□□□ -0.3
MSX1-202ENST00000468421 MYO5AQ9Y4I1 1855 aaKnown RBP13.16□□□□□ -0.3
MSX1-202ENST00000468421 WTIPA6NIX2 430 aaPredicted RBP13.15□□□□□ -0.3
MSX1-202ENST00000468421 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
MSX1-202ENST00000468421 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
MSX1-202ENST00000468421 SDSP20132 328 aa13.15□□□□□ -0.3
MSX1-202ENST00000468421 LPIN2Q92539 896 aa13.15□□□□□ -0.3
MSX1-202ENST00000468421 MASTLQ96GX5 879 aa13.15□□□□□ -0.3
MSX1-202ENST00000468421 MYH7P12883 1935 aa13.15□□□□□ -0.3
MSX1-202ENST00000468421 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
MSX1-202ENST00000468421 PPEF1O14829 653 aaPredicted RBP13.14□□□□□ -0.31
MSX1-202ENST00000468421 ERC2O15083 957 aa13.14□□□□□ -0.31
MSX1-202ENST00000468421 SLC5A1P13866 664 aa13.14□□□□□ -0.31
MSX1-202ENST00000468421 BOLA2Q9H3K6 86 aa13.14□□□□□ -0.31
MSX1-202ENST00000468421 H0YIN7 160 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 BBOX1O75936 387 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 ATP5JP18859 108 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 POLD1P28340 1107 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 PTGER2P43116 358 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 ZNF622Q969S3 477 aaKnown RBP eCLIP13.13□□□□□ -0.31
MSX1-202ENST00000468421 BACH2Q9BYV9 841 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 ANKRD2Q9GZV1 360 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 DOCK2Q92608 1830 aa13.13□□□□□ -0.31
MSX1-202ENST00000468421 KLRK1P26718 216 aa13.12□□□□□ -0.31
MSX1-202ENST00000468421 ALDH1B1P30837 517 aa13.12□□□□□ -0.31
MSX1-202ENST00000468421 PHKA1P46020 1223 aa13.12□□□□□ -0.31
MSX1-202ENST00000468421 GPSM2P81274 684 aa13.12□□□□□ -0.31
MSX1-202ENST00000468421 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
MSX1-202ENST00000468421 NDUFB9Q9Y6M9 179 aa13.12□□□□□ -0.31
MSX1-202ENST00000468421 XDHP47989 1333 aa13.12□□□□□ -0.31
MSX1-202ENST00000468421 IRS2Q9Y4H2 1338 aa13.12□□□□□ -0.31
MSX1-202ENST00000468421 TRIM6-TRIM34B2RNG4 842 aa13.11□□□□□ -0.31
MSX1-202ENST00000468421 IFIT1P09914 478 aaKnown RBP13.11□□□□□ -0.31
MSX1-202ENST00000468421 SCARF1Q14162 830 aa13.11□□□□□ -0.31
MSX1-202ENST00000468421 TTC39AQ5SRH9 613 aa13.11□□□□□ -0.31
MSX1-202ENST00000468421 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms