RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 GPR108Q9NPR9 543 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 AKAP11Q9UKA4 1901 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 ANKRD31Q8N7Z5 1873 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 ZPR1O75312 459 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 MAP4K4O95819 1239 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-208ENST00000468300 TM4SF1P30408 202 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 IFIT5Q13325 482 aaKnown RBP10.12□□□□□ -0.79
BRCA1-208ENST00000468300 NFIXQ14938 502 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 BICDL1Q6ZP65 573 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 ZNF526Q8TF50 670 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-208ENST00000468300 ECHDC1Q9NTX5 307 aa10.12□□□□□ -0.79
BRCA1-208ENST00000468300 CAMKK2Q96RR4 588 aa10.11□□□□□ -0.79
BRCA1-208ENST00000468300 DBNDD2Q9BQY9 259 aa10.11□□□□□ -0.79
BRCA1-208ENST00000468300 MSH5O43196 834 aa10.11□□□□□ -0.79
BRCA1-208ENST00000468300 RFC4P35249 363 aa10.11□□□□□ -0.79
BRCA1-208ENST00000468300 TIMM10P62072 90 aa10.11□□□□□ -0.79
BRCA1-208ENST00000468300 SF3B3Q15393 1217 aaKnown RBP10.11□□□□□ -0.79
BRCA1-208ENST00000468300 TMED8Q6PL24 325 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-208ENST00000468300 IFIT2P09913 472 aaKnown RBP10.11□□□□□ -0.79
BRCA1-208ENST00000468300 CHMLP26374 656 aa10.11□□□□□ -0.79
BRCA1-208ENST00000468300 KIF2CQ99661 725 aa10.11□□□□□ -0.79
BRCA1-208ENST00000468300 SETDB2Q96T68 719 aa10.1□□□□□ -0.79
BRCA1-208ENST00000468300 ANKRD18BA2A2Z9 1011 aa10.1□□□□□ -0.79
BRCA1-208ENST00000468300 NCLP19338 710 aaKnown RBP10.1□□□□□ -0.79
BRCA1-208ENST00000468300 MFAP1P55081 439 aaKnown RBP10.1□□□□□ -0.79
BRCA1-208ENST00000468300 COL23A1Q86Y22 540 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-208ENST00000468300 GLRX3O76003 335 aaKnown RBP10.09□□□□□ -0.79
BRCA1-208ENST00000468300 ATP5JP18859 108 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 CARMIL3Q8ND23 1372 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 PNPLA7Q6ZV29 1317 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 A0A1B0GUL7 405 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 FGFR2P21802 821 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 ADORA1P30542 326 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 RBM25P49756 843 aaKnown RBP10.09□□□□□ -0.79
BRCA1-208ENST00000468300 DDR1Q08345 913 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 EZH2Q15910 746 aaKnown RBP10.09□□□□□ -0.79
BRCA1-208ENST00000468300 LDHAL6AQ6ZMR3 332 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 SLC51AQ86UW1 340 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 NDUFB9Q9Y6M9 179 aa10.09□□□□□ -0.79
BRCA1-208ENST00000468300 MYO5AQ9Y4I1 1855 aaKnown RBP10.09□□□□□ -0.79
BRCA1-208ENST00000468300 EDC3Q96F86 508 aaKnown RBP10.08□□□□□ -0.8
BRCA1-208ENST00000468300 POLRMTO00411 1230 aaKnown RBP10.08□□□□□ -0.8
BRCA1-208ENST00000468300 CCDC152Q4G0S7 254 aa10.08□□□□□ -0.8
BRCA1-208ENST00000468300 RILPL2Q969X0 211 aa10.08□□□□□ -0.8
BRCA1-208ENST00000468300 USP26Q9BXU7 913 aa10.08□□□□□ -0.8
BRCA1-208ENST00000468300 WTIPA6NIX2 430 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-208ENST00000468300 NBPF5PQ86XG9 351 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-208ENST00000468300 ESYT1Q9BSJ8 1104 aa10.08□□□□□ -0.8
BRCA1-208ENST00000468300 C22orf23Q9BZE7 217 aa10.08□□□□□ -0.8
BRCA1-208ENST00000468300 NYXQ9GZU5 481 aa10.08□□□□□ -0.8
BRCA1-208ENST00000468300 BOLA2Q9H3K6 86 aa10.08□□□□□ -0.8
BRCA1-208ENST00000468300 COL11A2P13942 1736 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-208ENST00000468300 TRIM6-TRIM34B2RNG4 842 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 PDE8BO95263 885 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 CHGBP05060 677 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 EN1Q05925 392 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-208ENST00000468300 PRR5LQ6MZQ0 368 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 HAUS7Q99871 368 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 LTBP1Q14766 1721 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 SNAP23O00161 211 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 ERC2O15083 957 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 CELF1Q92879 486 aaKnown RBP10.07□□□□□ -0.8
BRCA1-208ENST00000468300 XAGE2Q96GT9 111 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 CEP126Q9P2H0 1117 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
BRCA1-208ENST00000468300 SCARF1Q14162 830 aa10.06□□□□□ -0.8
BRCA1-208ENST00000468300 TPTE2Q6XPS3 522 aa10.06□□□□□ -0.8
BRCA1-208ENST00000468300 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
BRCA1-208ENST00000468300 MROH5Q6ZUA9 1318 aa10.06□□□□□ -0.8
BRCA1-208ENST00000468300 LRRC37AA6NMS7 1700 aa10.06□□□□□ -0.8
BRCA1-208ENST00000468300 CNTROBQ8N137 903 aa10.06□□□□□ -0.8
BRCA1-208ENST00000468300 HELBQ8NG08 1087 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-208ENST00000468300 EVI5LQ96CN4 794 aa10.06□□□□□ -0.8
BRCA1-208ENST00000468300 SNRKQ9NRH2 765 aa10.06□□□□□ -0.8
BRCA1-208ENST00000468300 TFCP2L1Q9NZI6 479 aa10.06□□□□□ -0.8
BRCA1-208ENST00000468300 KLRG2A4D1S0 409 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-208ENST00000468300 CRY2Q49AN0 593 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 METTL24Q5JXM2 366 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.05□□□□□ -0.8
BRCA1-208ENST00000468300 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 NEUROD6Q96NK8 337 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 CNNM1Q9NRU3 951 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 MYH7P12883 1935 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 TAF5LO75529 589 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 SERPINB2P05120 415 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-208ENST00000468300 IRS2Q9Y4H2 1338 aa10.05□□□□□ -0.8
BRCA1-208ENST00000468300 SGSM2O43147 1006 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 CHRNDQ07001 517 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 AKAP2Q9Y2D5 859 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 ATP2B3Q16720 1220 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 ZNF512BQ96KM6 892 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-208ENST00000468300 ANTXR1Q9H6X2 564 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 ANP32AP39687 249 aaKnown RBP10.04□□□□□ -0.8
BRCA1-208ENST00000468300 CNBD1Q8NA66 436 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 IL17RAQ96F46 866 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
BRCA1-208ENST00000468300 NLRP3Q96P20 1036 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms