RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ARHGEF6Q15052 776 aa15.8■□□□□ 0.12
VPS26A-204ENST00000467852 IFNL1Q8IU54 200 aa15.8■□□□□ 0.12
VPS26A-204ENST00000467852 DBNDD1Q9H9R9 158 aa15.8■□□□□ 0.12
VPS26A-204ENST00000467852 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
VPS26A-204ENST00000467852 MYCP01106 439 aaPredicted RBP15.79■□□□□ 0.12
VPS26A-204ENST00000467852 SNRPA1P09661 255 aaKnown RBP15.79■□□□□ 0.12
VPS26A-204ENST00000467852 COL9A1P20849 921 aa15.79■□□□□ 0.12
VPS26A-204ENST00000467852 SP3Q02447 781 aa15.79■□□□□ 0.12
VPS26A-204ENST00000467852 WASHC4Q2M389 1173 aa15.79■□□□□ 0.12
VPS26A-204ENST00000467852 IL17REQ8NFR9 667 aa15.79■□□□□ 0.12
VPS26A-204ENST00000467852 KDM3BQ7LBC6 1761 aa15.79■□□□□ 0.12
VPS26A-204ENST00000467852 NBPF26B4DH59 902 aa15.78■□□□□ 0.12
VPS26A-204ENST00000467852 ERVV-1B6SEH8 477 aa15.78■□□□□ 0.12
VPS26A-204ENST00000467852 KCNQ3O43525 872 aa15.78■□□□□ 0.12
VPS26A-204ENST00000467852 SPRYD7Q5W111 196 aa15.78■□□□□ 0.12
VPS26A-204ENST00000467852 NBPF10Q6P3W6 841 aaKnown RBP15.78■□□□□ 0.12
VPS26A-204ENST00000467852 C3orf67Q6ZVT6 689 aa15.78■□□□□ 0.12
VPS26A-204ENST00000467852 GNAT3A8MTJ3 354 aa15.77■□□□□ 0.12
VPS26A-204ENST00000467852 GPTP24298 496 aa15.77■□□□□ 0.12
VPS26A-204ENST00000467852 SUSD4Q5VX71 490 aa15.77■□□□□ 0.12
VPS26A-204ENST00000467852 ARMC9Q7Z3E5 817 aa15.77■□□□□ 0.12
VPS26A-204ENST00000467852 ZBTB7BO15156 539 aaPredicted RBP15.76■□□□□ 0.11
VPS26A-204ENST00000467852 PTPN12Q05209 780 aaKnown RBP15.76■□□□□ 0.11
VPS26A-204ENST00000467852 OTUD7BQ6GQQ9 843 aa15.76■□□□□ 0.11
VPS26A-204ENST00000467852 PPP1R42Q7Z4L9 355 aa15.76■□□□□ 0.11
VPS26A-204ENST00000467852 PTCH2Q9Y6C5 1203 aa15.76■□□□□ 0.11
VPS26A-204ENST00000467852 VCANP13611 3396 aa15.75■□□□□ 0.11
VPS26A-204ENST00000467852 ERBB4Q15303 1308 aa15.75■□□□□ 0.11
VPS26A-204ENST00000467852 RIMBP2O15034 1052 aa15.75■□□□□ 0.11
VPS26A-204ENST00000467852 ECE2O60344 883 aa15.75■□□□□ 0.11
VPS26A-204ENST00000467852 PRAMEF18Q5VWM3 479 aa15.75■□□□□ 0.11
VPS26A-204ENST00000467852 Q7L0L9 218 aa15.75■□□□□ 0.11
VPS26A-204ENST00000467852 MORC1Q86VD1 984 aa15.75■□□□□ 0.11
VPS26A-204ENST00000467852 KCNQ5Q9NR82 932 aa15.75■□□□□ 0.11
VPS26A-204ENST00000467852 TAF1P21675 1872 aa15.74■□□□□ 0.11
VPS26A-204ENST00000467852 NTSR2O95665 410 aa15.74■□□□□ 0.11
VPS26A-204ENST00000467852 VIL1P09327 827 aaKnown RBP15.74■□□□□ 0.11
VPS26A-204ENST00000467852 CRHR2Q13324 411 aa15.74■□□□□ 0.11
VPS26A-204ENST00000467852 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
VPS26A-204ENST00000467852 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
VPS26A-204ENST00000467852 MTMR10Q9NXD2 777 aa15.74■□□□□ 0.11
VPS26A-204ENST00000467852 SCAF8Q9UPN6 1271 aaKnown RBP15.74■□□□□ 0.11
VPS26A-204ENST00000467852 RTL9Q8NET4 1388 aa15.74■□□□□ 0.11
VPS26A-204ENST00000467852 UBN2Q6ZU65 1347 aa15.73■□□□□ 0.11
VPS26A-204ENST00000467852 ZNF280AP59817 542 aaPredicted RBP15.73■□□□□ 0.11
VPS26A-204ENST00000467852 KIF6Q6ZMV9 814 aa15.73■□□□□ 0.11
VPS26A-204ENST00000467852 DDX46Q7L014 1031 aaKnown RBP15.73■□□□□ 0.11
VPS26A-204ENST00000467852 TMC4Q7Z404 712 aa15.73■□□□□ 0.11
VPS26A-204ENST00000467852 NKX2-3Q8TAU0 364 aa15.73■□□□□ 0.11
VPS26A-204ENST00000467852 DDX60Q8IY21 1712 aaKnown RBP15.73■□□□□ 0.11
VPS26A-204ENST00000467852 MAP3K15Q6ZN16 1313 aa15.72■□□□□ 0.11
VPS26A-204ENST00000467852 C6orf229H3BNL8 230 aa15.72■□□□□ 0.11
VPS26A-204ENST00000467852 IGF2BP3O00425 579 aaKnown RBP eCLIP15.72■□□□□ 0.11
VPS26A-204ENST00000467852 DOK7Q18PE1 504 aa15.72■□□□□ 0.11
VPS26A-204ENST00000467852 SLC10A5Q5PT55 438 aa15.72■□□□□ 0.11
VPS26A-204ENST00000467852 GAS2L2Q8NHY3 880 aa15.72■□□□□ 0.11
VPS26A-204ENST00000467852 SLC10A4Q96EP9 437 aa15.72■□□□□ 0.11
VPS26A-204ENST00000467852 EYA3Q99504 573 aa15.72■□□□□ 0.11
VPS26A-204ENST00000467852 GRAPQ13588 217 aa15.71■□□□□ 0.11
VPS26A-204ENST00000467852 PRKG1Q13976 671 aa15.71■□□□□ 0.11
VPS26A-204ENST00000467852 AGBL3Q8NEM8 1001 aa15.71■□□□□ 0.11
VPS26A-204ENST00000467852 GRAPLQ8TC17 118 aaPredicted RBP15.71■□□□□ 0.11
VPS26A-204ENST00000467852 MYOZ2Q9NPC6 264 aa15.71■□□□□ 0.11
VPS26A-204ENST00000467852 STAP2Q9UGK3 403 aa15.71■□□□□ 0.11
VPS26A-204ENST00000467852 DUOX1Q9NRD9 1551 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 ANKRD36CQ5JPF3 1778 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 G3V3G9 751 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 ZBTB48P10074 688 aaPredicted RBP15.7■□□□□ 0.1
VPS26A-204ENST00000467852 PLA2G5P39877 138 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 CAP1Q01518 475 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 DCAF8Q5TAQ9 597 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 ZNF34Q8IZ26 560 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 SH3TC2Q8TF17 1288 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 FAM122AQ96E09 287 aa15.7■□□□□ 0.1
VPS26A-204ENST00000467852 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.7■□□□□ 0.1
VPS26A-204ENST00000467852 NSFL1CQ9UNZ2 370 aaKnown RBP15.7■□□□□ 0.1
VPS26A-204ENST00000467852 EVI5O60447 810 aa15.69■□□□□ 0.1
VPS26A-204ENST00000467852 PARP10Q53GL7 1025 aa15.69■□□□□ 0.1
VPS26A-204ENST00000467852 LDLRAD1Q5T700 205 aa15.69■□□□□ 0.1
VPS26A-204ENST00000467852 SHISA4Q96DD7 197 aa15.69■□□□□ 0.1
VPS26A-204ENST00000467852 SCN9AQ15858 1988 aa15.69■□□□□ 0.1
VPS26A-204ENST00000467852 ZNF646O15015 1829 aaPredicted RBP15.68■□□□□ 0.1
VPS26A-204ENST00000467852 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
VPS26A-204ENST00000467852 USP17L8P0C7I0 530 aa15.68■□□□□ 0.1
VPS26A-204ENST00000467852 POLR3GLQ9BT43 218 aa15.68■□□□□ 0.1
VPS26A-204ENST00000467852 UTP14AQ9BVJ6 771 aaKnown RBP15.68■□□□□ 0.1
VPS26A-204ENST00000467852 ANGEL1Q9UNK9 670 aaKnown RBP15.68■□□□□ 0.1
VPS26A-204ENST00000467852 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
VPS26A-204ENST00000467852 LAMB4A4D0S4 1761 aa15.67■□□□□ 0.1
VPS26A-204ENST00000467852 LAMB2P55268 1798 aa15.67■□□□□ 0.1
VPS26A-204ENST00000467852 CEMIPQ8WUJ3 1361 aa15.67■□□□□ 0.1
VPS26A-204ENST00000467852 RSBN1LQ6PCB5 846 aaPredicted RBP15.67■□□□□ 0.1
VPS26A-204ENST00000467852 WNK4Q96J92 1243 aa15.67■□□□□ 0.1
VPS26A-204ENST00000467852 ZBTB3Q9H5J0 574 aa15.67■□□□□ 0.1
VPS26A-204ENST00000467852 POLLQ9UGP5 575 aa15.67■□□□□ 0.1
VPS26A-204ENST00000467852 BMP8BP34820 402 aa15.66■□□□□ 0.1
VPS26A-204ENST00000467852 TTLL7Q6ZT98 887 aa15.66■□□□□ 0.1
VPS26A-204ENST00000467852 UBE2Q1Q7Z7E8 422 aa15.66■□□□□ 0.1
VPS26A-204ENST00000467852 ZC3H12CQ9C0D7 883 aaKnown RBP15.66■□□□□ 0.1
VPS26A-204ENST00000467852 LAMB1P07942 1786 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms