RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 PRAMEF18Q5VWM3 479 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 DBNDD1Q9H9R9 158 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 KIAA0100Q14667 2235 aaKnown RBP8.63□□□□□ -1.03
PTPRE-206ENST00000467366 SPTBN5Q9NRC6 3674 aaKnown RBP8.63□□□□□ -1.03
PTPRE-206ENST00000467366 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
PTPRE-206ENST00000467366 SCN9AQ15858 1988 aa8.62□□□□□ -1.03
PTPRE-206ENST00000467366 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-206ENST00000467366 NTSR2O95665 410 aa8.62□□□□□ -1.03
PTPRE-206ENST00000467366 MYCP01106 439 aaPredicted RBP8.62□□□□□ -1.03
PTPRE-206ENST00000467366 SCARF1Q14162 830 aa8.62□□□□□ -1.03
PTPRE-206ENST00000467366 SLC4A8Q2Y0W8 1093 aa8.62□□□□□ -1.03
PTPRE-206ENST00000467366 DPF3Q92784 378 aa8.62□□□□□ -1.03
PTPRE-206ENST00000467366 GNAT3A8MTJ3 354 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 RIMBP2O15034 1052 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 ALDH1A1P00352 501 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
PTPRE-206ENST00000467366 MORC1Q86VD1 984 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 NGEFQ8N5V2 710 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 ERO1AQ96HE7 468 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 NLRP3Q96P20 1036 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 EFCC1Q9HA90 598 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 CEMIPQ8WUJ3 1361 aa8.61□□□□□ -1.03
PTPRE-206ENST00000467366 ERVV-1B6SEH8 477 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 IGF2BP3O00425 579 aaKnown RBP eCLIP8.6□□□□□ -1.03
PTPRE-206ENST00000467366 BBOX1O75936 387 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 SNRPA1P09661 255 aaKnown RBP8.6□□□□□ -1.03
PTPRE-206ENST00000467366 PTPN12Q05209 780 aaKnown RBP8.6□□□□□ -1.03
PTPRE-206ENST00000467366 TTLL12Q14166 644 aaPredicted RBP8.6□□□□□ -1.03
PTPRE-206ENST00000467366 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 WASHC4Q2M389 1173 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 SPRYD7Q5W111 196 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 TTLL7Q6ZT98 887 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 Q7L0L9 218 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 IFNL1Q8IU54 200 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 STXBP5LQ9Y2K9 1186 aa8.6□□□□□ -1.03
PTPRE-206ENST00000467366 ZSWIM8A7E2V4 1837 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 MAP3K15Q6ZN16 1313 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 ECE2O60344 883 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 ZNF280AP59817 542 aaPredicted RBP8.59□□□□□ -1.03
PTPRE-206ENST00000467366 PRKG1Q13976 671 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 SLC9C1Q4G0N8 1177 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 ZNF34Q8IZ26 560 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 PTCH2Q9Y6C5 1203 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 PSME4Q14997 1843 aa8.59□□□□□ -1.03
PTPRE-206ENST00000467366 LAMA3Q16787 3333 aa8.59□□□□□ -1.04
PTPRE-206ENST00000467366 A0A1W2PPC1 479 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 VIL1P09327 827 aaKnown RBP8.58□□□□□ -1.04
PTPRE-206ENST00000467366 FGD1P98174 961 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 SP3Q02447 781 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 CRHR2Q13324 411 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 TCIRG1Q13488 830 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 SLC10A5Q5PT55 438 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 NBPF11Q86T75 865 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPRE-206ENST00000467366 DEFB123Q8N688 67 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 SHISA4Q96DD7 197 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 POLR3GLQ9BT43 218 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 ZNF646O15015 1829 aaPredicted RBP8.58□□□□□ -1.04
PTPRE-206ENST00000467366 COL4A1P02462 1669 aa8.58□□□□□ -1.04
PTPRE-206ENST00000467366 ERBB4Q15303 1308 aa8.57□□□□□ -1.04
PTPRE-206ENST00000467366 MANSC4A6NHS7 340 aaPredicted RBP8.57□□□□□ -1.04
PTPRE-206ENST00000467366 ZBTB7BO15156 539 aaPredicted RBP8.57□□□□□ -1.04
PTPRE-206ENST00000467366 INHBEP58166 350 aa8.57□□□□□ -1.04
PTPRE-206ENST00000467366 GRAPQ13588 217 aa8.57□□□□□ -1.04
PTPRE-206ENST00000467366 PPP1R42Q7Z4L9 355 aa8.57□□□□□ -1.04
PTPRE-206ENST00000467366 GRAPLQ8TC17 118 aaPredicted RBP8.57□□□□□ -1.04
PTPRE-206ENST00000467366 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
PTPRE-206ENST00000467366 MYOZ2Q9NPC6 264 aa8.57□□□□□ -1.04
PTPRE-206ENST00000467366 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.57□□□□□ -1.04
PTPRE-206ENST00000467366 POLLQ9UGP5 575 aa8.57□□□□□ -1.04
PTPRE-206ENST00000467366 FZD1Q9UP38 647 aa8.57□□□□□ -1.04
PTPRE-206ENST00000467366 VCANP13611 3396 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 C6orf229H3BNL8 230 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 HCLS1P14317 486 aaPredicted RBP8.56□□□□□ -1.04
PTPRE-206ENST00000467366 COL9A1P20849 921 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 NBPF9Q3BBW0 867 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 LDLRAD1Q5T700 205 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 KIF6Q6ZMV9 814 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 UBE2Q1Q7Z7E8 422 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 GAS2L2Q8NHY3 880 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 PANK3Q9H999 370 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 MTMR10Q9NXD2 777 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 STAP2Q9UGK3 403 aa8.56□□□□□ -1.04
PTPRE-206ENST00000467366 NSFL1CQ9UNZ2 370 aaKnown RBP8.56□□□□□ -1.04
PTPRE-206ENST00000467366 DIAPH1O60610 1272 aaKnown RBP8.55□□□□□ -1.04
PTPRE-206ENST00000467366 NF2P35240 595 aa8.55□□□□□ -1.04
PTPRE-206ENST00000467366 GPSM2P81274 684 aa8.55□□□□□ -1.04
PTPRE-206ENST00000467366 MTFR1Q15390 333 aa8.55□□□□□ -1.04
PTPRE-206ENST00000467366 GPR153Q6NV75 609 aa8.55□□□□□ -1.04
PTPRE-206ENST00000467366 GIGYF2Q6Y7W6 1299 aaKnown RBP8.55□□□□□ -1.04
PTPRE-206ENST00000467366 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
PTPRE-206ENST00000467366 GMLQ99445 158 aa8.55□□□□□ -1.04
PTPRE-206ENST00000467366 RAPGEFL1Q9UHV5 662 aa8.55□□□□□ -1.04
PTPRE-206ENST00000467366 RRP7AQ9Y3A4 280 aaKnown RBP8.55□□□□□ -1.04
PTPRE-206ENST00000467366 MYL6BP14649 208 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 PARP10Q53GL7 1025 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms