RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SOX18P35713 384 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 AAMPQ13685 434 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 PDE12Q6L8Q7 609 aaKnown RBP7.1□□□□□ -1.27
VPS50-209ENST00000467326 PSAPL1Q6NUJ1 521 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 TXNDC2Q86VQ3 553 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 MICALL1Q8N3F8 863 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 NSUN5Q96P11 429 aaKnown RBP7.1□□□□□ -1.27
VPS50-209ENST00000467326 JPH1Q9HDC5 661 aaPredicted RBP7.1□□□□□ -1.27
VPS50-209ENST00000467326 ZFP64Q9NPA5 681 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 PRDM6Q9NQX0 595 aa7.1□□□□□ -1.27
VPS50-209ENST00000467326 BTBD11A6QL63 1104 aa7.09□□□□□ -1.27
VPS50-209ENST00000467326 LILRB5O75023 590 aa7.09□□□□□ -1.27
VPS50-209ENST00000467326 BRD1O95696 1058 aa7.09□□□□□ -1.27
VPS50-209ENST00000467326 HOXD8P13378 290 aaPredicted RBP7.09□□□□□ -1.27
VPS50-209ENST00000467326 EIF2AK2P19525 551 aaKnown RBP7.09□□□□□ -1.27
VPS50-209ENST00000467326 PRRT3Q5FWE3 981 aa7.09□□□□□ -1.27
VPS50-209ENST00000467326 C20orf204Q6ZNR8 217 aa7.09□□□□□ -1.27
VPS50-209ENST00000467326 ZNF438Q7Z4V0 828 aa7.09□□□□□ -1.27
VPS50-209ENST00000467326 CCER1Q8TC90 406 aaPredicted RBP7.09□□□□□ -1.27
VPS50-209ENST00000467326 POLIQ9UNA4 740 aa7.09□□□□□ -1.27
VPS50-209ENST00000467326 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
VPS50-209ENST00000467326 ZBTB42B2RXF5 422 aa7.08□□□□□ -1.28
VPS50-209ENST00000467326 APBA3O96018 575 aa7.08□□□□□ -1.28
VPS50-209ENST00000467326 C8orf86Q6ZUL3 223 aa7.08□□□□□ -1.28
VPS50-209ENST00000467326 TTC16Q8NEE8 873 aa7.08□□□□□ -1.28
VPS50-209ENST00000467326 OR13H1Q8NG92 308 aa7.08□□□□□ -1.28
VPS50-209ENST00000467326 NUDT8Q8WV74 236 aa7.08□□□□□ -1.28
VPS50-209ENST00000467326 TRIM11Q96F44 468 aa7.08□□□□□ -1.28
VPS50-209ENST00000467326 ABI2Q9NYB9 513 aaPredicted RBP7.08□□□□□ -1.28
VPS50-209ENST00000467326 FZD6O60353 706 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 USP5P45974 858 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 C8orf34Q49A92 452 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 PERM1Q5SV97 790 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 ARTNQ5T4W7 220 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 TTC39BQ5VTQ0 682 aaPredicted RBP7.07□□□□□ -1.28
VPS50-209ENST00000467326 ELMSAN1Q6PJG2 1045 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 HFE2Q6ZVN8 426 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 NACC1Q96RE7 527 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 LPIN3Q9BQK8 851 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 ELP3Q9H9T3 547 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 FRRS1LQ9P0K9 344 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 TMEM63CQ9P1W3 806 aa7.07□□□□□ -1.28
VPS50-209ENST00000467326 A6NHS1 94 aa7.06□□□□□ -1.28
VPS50-209ENST00000467326 RGS9O75916 674 aaPredicted RBP7.06□□□□□ -1.28
VPS50-209ENST00000467326 GHRHP01286 108 aa7.06□□□□□ -1.28
VPS50-209ENST00000467326 NID1P14543 1247 aa7.06□□□□□ -1.28
VPS50-209ENST00000467326 PLVAPQ9BX97 442 aa7.06□□□□□ -1.28
VPS50-209ENST00000467326 GNEQ9Y223 722 aaKnown RBP7.06□□□□□ -1.28
VPS50-209ENST00000467326 COL9A3Q14050 684 aaPredicted RBP7.05□□□□□ -1.28
VPS50-209ENST00000467326 GJD3Q8N144 294 aa7.05□□□□□ -1.28
VPS50-209ENST00000467326 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
VPS50-209ENST00000467326 RBSNQ9H1K0 784 aa7.05□□□□□ -1.28
VPS50-209ENST00000467326 GGNBP2Q9H3C7 697 aa7.05□□□□□ -1.28
VPS50-209ENST00000467326 CCDC87Q9NVE4 849 aa7.05□□□□□ -1.28
VPS50-209ENST00000467326 LOC102724428A0A0B4J2F2 783 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 J3QW42 95 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 CYP2E1P05181 493 aaPredicted RBP7.04□□□□□ -1.28
VPS50-209ENST00000467326 AFF1P51825 1210 aaKnown RBP7.04□□□□□ -1.28
VPS50-209ENST00000467326 SIK1P57059 783 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 ARHGAP4P98171 946 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 EHHADHQ08426 723 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 HYAL2Q12891 473 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 RSPO4Q2I0M5 234 aaPredicted RBP7.04□□□□□ -1.28
VPS50-209ENST00000467326 SNX29Q8TEQ0 813 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 TRAIPQ9BWF2 469 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 BRPF3Q9ULD4 1205 aa7.04□□□□□ -1.28
VPS50-209ENST00000467326 SOWAHDA6NJG2 315 aa7.03□□□□□ -1.28
VPS50-209ENST00000467326 NDUFB5O43674 189 aa7.03□□□□□ -1.28
VPS50-209ENST00000467326 COL13A1Q5TAT6 717 aaPredicted RBP7.03□□□□□ -1.28
VPS50-209ENST00000467326 XKR5Q6UX68 686 aa7.03□□□□□ -1.28
VPS50-209ENST00000467326 PLD4Q96BZ4 506 aa7.03□□□□□ -1.28
VPS50-209ENST00000467326 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
VPS50-209ENST00000467326 KIF4AO95239 1232 aa7.02□□□□□ -1.29
VPS50-209ENST00000467326 KCNA1Q09470 495 aa7.02□□□□□ -1.29
VPS50-209ENST00000467326 ECM1Q16610 540 aa7.02□□□□□ -1.29
VPS50-209ENST00000467326 NKAPLQ5M9Q1 402 aa7.02□□□□□ -1.29
VPS50-209ENST00000467326 NCAPG2Q86XI2 1143 aa7.02□□□□□ -1.29
VPS50-209ENST00000467326 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
VPS50-209ENST00000467326 SPACA7Q96KW9 195 aa7.02□□□□□ -1.29
VPS50-209ENST00000467326 CNTN3Q9P232 1028 aa7.02□□□□□ -1.29
VPS50-209ENST00000467326 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 DYRK3O43781 588 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 PHACTR2O75167 634 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 TNFRSF21O75509 655 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 CES1P23141 567 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 ATP11AP98196 1134 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 GRIK5Q16478 980 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 WFDC8Q8IUA0 241 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 C1orf127Q8N9H9 656 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 TTC9Q92623 222 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 CHRDQ9H2X0 955 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
VPS50-209ENST00000467326 RAC1P63000 192 aa7□□□□□ -1.29
VPS50-209ENST00000467326 TRAPPC3LQ5T215 181 aa7□□□□□ -1.29
VPS50-209ENST00000467326 MSL1Q68DK7 614 aa7□□□□□ -1.29
VPS50-209ENST00000467326 BIN2Q9UBW5 565 aaPredicted RBP7□□□□□ -1.29
VPS50-209ENST00000467326 FOXD3Q9UJU5 478 aaPredicted RBP7□□□□□ -1.29
VPS50-209ENST00000467326 SMNDC1O75940 238 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS50-209ENST00000467326 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
VPS50-209ENST00000467326 RASSF4Q9H2L5 321 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms