RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 NSUN5Q96P11 429 aaKnown RBP9.19□□□□□ -0.94
PRPF40A-205ENST00000467114 MKNK1Q9BUB5 465 aa9.19□□□□□ -0.94
PRPF40A-205ENST00000467114 NAA30Q147X3 362 aaPredicted RBP9.18□□□□□ -0.94
PRPF40A-205ENST00000467114 PIK3R5Q8WYR1 880 aa9.18□□□□□ -0.94
PRPF40A-205ENST00000467114 PBXIP1Q96AQ6 731 aa9.18□□□□□ -0.94
PRPF40A-205ENST00000467114 UBAP1LF5GYI3 381 aa9.17□□□□□ -0.94
PRPF40A-205ENST00000467114 NOS3P29474 1203 aa9.17□□□□□ -0.94
PRPF40A-205ENST00000467114 OR13H1Q8NG92 308 aa9.17□□□□□ -0.94
PRPF40A-205ENST00000467114 RBSNQ9H1K0 784 aa9.17□□□□□ -0.94
PRPF40A-205ENST00000467114 SRA1Q9HD15 236 aaKnown RBP9.17□□□□□ -0.94
PRPF40A-205ENST00000467114 ZAP70P43403 619 aa9.16□□□□□ -0.94
PRPF40A-205ENST00000467114 IREB2P48200 963 aaKnown RBP9.16□□□□□ -0.94
PRPF40A-205ENST00000467114 GDF6Q6KF10 455 aaPredicted RBP9.16□□□□□ -0.94
PRPF40A-205ENST00000467114 CACTIN-AS1Q8N1I8 211 aa9.16□□□□□ -0.94
PRPF40A-205ENST00000467114 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
PRPF40A-205ENST00000467114 STIM2Q9P246 746 aa9.16□□□□□ -0.94
PRPF40A-205ENST00000467114 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
PRPF40A-205ENST00000467114 ARTNQ5T4W7 220 aa9.14□□□□□ -0.95
PRPF40A-205ENST00000467114 MAP4K3Q8IVH8 894 aa9.14□□□□□ -0.95
PRPF40A-205ENST00000467114 TMEM130Q8N3G9 435 aa9.14□□□□□ -0.95
PRPF40A-205ENST00000467114 FNDC3AQ9Y2H6 1198 aaKnown RBP9.14□□□□□ -0.95
PRPF40A-205ENST00000467114 SCO2A0A1W2PP80 73 aa9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 ZBTB39O15060 712 aa9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 SETDB1Q15047 1291 aa9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 ABTB2Q8N961 1025 aa9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 DCAF11Q8TEB1 546 aa9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 CCDC97Q96F63 343 aaPredicted RBP9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 MEGF10Q96KG7 1140 aa9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 SERPINA10Q9UK55 444 aa9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 TRIM33Q9UPN9 1127 aa9.13□□□□□ -0.95
PRPF40A-205ENST00000467114 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
PRPF40A-205ENST00000467114 DZIP1LQ8IYY4 767 aaKnown RBP9.12□□□□□ -0.95
PRPF40A-205ENST00000467114 GPR152Q8TDT2 470 aa9.12□□□□□ -0.95
PRPF40A-205ENST00000467114 MUC3BQ9H195 1237 aa9.12□□□□□ -0.95
PRPF40A-205ENST00000467114 AKTIPQ9H8T0 292 aa9.12□□□□□ -0.95
PRPF40A-205ENST00000467114 ATP2B4P23634 1241 aa9.11□□□□□ -0.95
PRPF40A-205ENST00000467114 HYAL2Q12891 473 aa9.11□□□□□ -0.95
PRPF40A-205ENST00000467114 ZFP64Q9NPA5 681 aa9.11□□□□□ -0.95
PRPF40A-205ENST00000467114 F8W735 103 aaPredicted RBP9.1□□□□□ -0.95
PRPF40A-205ENST00000467114 KIF4AO95239 1232 aa9.1□□□□□ -0.95
PRPF40A-205ENST00000467114 TTC39BQ5VTQ0 682 aaPredicted RBP9.1□□□□□ -0.95
PRPF40A-205ENST00000467114 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
PRPF40A-205ENST00000467114 PPME1Q9Y570 386 aa9.1□□□□□ -0.95
PRPF40A-205ENST00000467114 SPACA7Q96KW9 195 aa9.09□□□□□ -0.95
PRPF40A-205ENST00000467114 ABI2Q9NYB9 513 aaPredicted RBP9.09□□□□□ -0.95
PRPF40A-205ENST00000467114 SEPT3Q9UH03 358 aa9.09□□□□□ -0.95
PRPF40A-205ENST00000467114 ALX3O95076 343 aa9.08□□□□□ -0.96
PRPF40A-205ENST00000467114 ATP11AP98196 1134 aa9.08□□□□□ -0.96
PRPF40A-205ENST00000467114 PDE12Q6L8Q7 609 aaKnown RBP9.08□□□□□ -0.96
PRPF40A-205ENST00000467114 PRR23CQ6ZRP0 262 aa9.08□□□□□ -0.96
PRPF40A-205ENST00000467114 Q6ZS46 218 aa9.08□□□□□ -0.96
PRPF40A-205ENST00000467114 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.96
PRPF40A-205ENST00000467114 SCNN1AP37088 669 aa9.07□□□□□ -0.96
PRPF40A-205ENST00000467114 LRP8Q14114 963 aa9.07□□□□□ -0.96
PRPF40A-205ENST00000467114 CEP135Q66GS9 1140 aa9.07□□□□□ -0.96
PRPF40A-205ENST00000467114 CEP120Q8N960 986 aa9.06□□□□□ -0.96
PRPF40A-205ENST00000467114 GALNT11Q8NCW6 608 aa9.06□□□□□ -0.96
PRPF40A-205ENST00000467114 NUDT16Q96DE0 195 aaKnown RBP9.06□□□□□ -0.96
PRPF40A-205ENST00000467114 KRTAP4-8Q9BYQ9 185 aa9.06□□□□□ -0.96
PRPF40A-205ENST00000467114 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
PRPF40A-205ENST00000467114 LINC01387J3KSC0 135 aa9.05□□□□□ -0.96
PRPF40A-205ENST00000467114 TM4SF5O14894 197 aa9.05□□□□□ -0.96
PRPF40A-205ENST00000467114 CYP2E1P05181 493 aaPredicted RBP9.05□□□□□ -0.96
PRPF40A-205ENST00000467114 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.05□□□□□ -0.96
PRPF40A-205ENST00000467114 RASSF4Q9H2L5 321 aa9.05□□□□□ -0.96
PRPF40A-205ENST00000467114 TMEM63CQ9P1W3 806 aa9.05□□□□□ -0.96
PRPF40A-205ENST00000467114 RPLP1P05386 114 aaKnown RBP9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 CDC27P30260 824 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 XKR5Q6UX68 686 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 ADAMTSL4Q6UY14 1074 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 SLC51AQ86UW1 340 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 ATCAYQ86WG3 371 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 HELQQ8TDG4 1101 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 PBX4Q9BYU1 374 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 LACRTQ9GZZ8 138 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 RNF112Q9ULX5 631 aa9.04□□□□□ -0.96
PRPF40A-205ENST00000467114 HYAL3O43820 417 aaPredicted RBP9.03□□□□□ -0.96
PRPF40A-205ENST00000467114 ARID3CA6NKF2 412 aa9.02□□□□□ -0.97
PRPF40A-205ENST00000467114 CD68P34810 354 aaPredicted RBP9.02□□□□□ -0.97
PRPF40A-205ENST00000467114 ZNF438Q7Z4V0 828 aa9.02□□□□□ -0.97
PRPF40A-205ENST00000467114 NCAPG2Q86XI2 1143 aa9.02□□□□□ -0.97
PRPF40A-205ENST00000467114 AGGF1Q8N302 714 aaeCLIP9.02□□□□□ -0.97
PRPF40A-205ENST00000467114 ADAM19Q9H013 955 aa9.02□□□□□ -0.97
PRPF40A-205ENST00000467114 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
PRPF40A-205ENST00000467114 TXNDC11Q6PKC3 985 aa9.01□□□□□ -0.97
PRPF40A-205ENST00000467114 SALL4Q9UJQ4 1053 aa9.01□□□□□ -0.97
PRPF40A-205ENST00000467114 TMEM88BA6NKF7 163 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 FSCN2O14926 492 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 WISP1O95388 367 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 GLB1P16278 677 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 PTPRAP18433 802 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 EPHA1P21709 976 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
PRPF40A-205ENST00000467114 NBPF11Q86T75 865 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 KLHL23Q8NBE8 558 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 EDEM1Q92611 657 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 PSMG3-AS1Q96PY0 264 aa9□□□□□ -0.97
PRPF40A-205ENST00000467114 UBL7Q96S82 380 aaPredicted RBP9□□□□□ -0.97
PRPF40A-205ENST00000467114 POP1Q99575 1024 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms