RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 HIRAP54198 1017 aaPredicted RBP7.47□□□□□ -1.21
CXXC4-202ENST00000466963 PLBD2Q8NHP8 589 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 XDHP47989 1333 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 TNNT2P45379 298 aaPredicted RBP7.47□□□□□ -1.21
CXXC4-202ENST00000466963 OGFOD1Q8N543 542 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 GMLQ99445 158 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 HYPKQ9NX55 129 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 PTPN22Q9Y2R2 807 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 LEMD3Q9Y2U8 911 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 NR2E3Q9Y5X4 410 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 ZNF804BA4D1E1 1349 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 USP17L3A6NCW0 530 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 USP17L4A6NCW7 530 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 TRPA1O75762 1119 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 HMOX1P09601 288 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 USP17L8P0C7I0 530 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 PRKAR2BP31323 418 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 NFE2L2Q16236 605 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 STRIP1Q5VSL9 837 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 USP17L1Q7RTZ2 530 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 NLRP10Q86W26 655 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 COA1Q9GZY4 146 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 GGA1Q9UJY5 639 aa7.46□□□□□ -1.21
CXXC4-202ENST00000466963 G3V3G9 751 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 ECE2O60344 883 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 TNFAIP1Q13829 316 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 KIF22Q14807 665 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 DCAF8Q5TAQ9 597 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 ZNF296Q8WUU4 475 aaPredicted RBP7.46□□□□□ -1.22
CXXC4-202ENST00000466963 CDC5LQ99459 802 aaKnown RBP7.46□□□□□ -1.22
CXXC4-202ENST00000466963 ISCA1Q9BUE6 129 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 ANKRD2Q9GZV1 360 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 SSC5DA1L4H1 1573 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 TAF1P21675 1872 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 UBN2Q6ZU65 1347 aa7.46□□□□□ -1.22
CXXC4-202ENST00000466963 PSMD14O00487 310 aa7.45□□□□□ -1.22
CXXC4-202ENST00000466963 CCDC152Q4G0S7 254 aa7.45□□□□□ -1.22
CXXC4-202ENST00000466963 TRPM4Q8TD43 1214 aa7.45□□□□□ -1.22
CXXC4-202ENST00000466963 ZNF330Q9Y3S2 320 aaPredicted RBP7.45□□□□□ -1.22
CXXC4-202ENST00000466963 PPP1R12BO60237 982 aaPredicted RBP7.45□□□□□ -1.22
CXXC4-202ENST00000466963 HLFQ16534 295 aa7.45□□□□□ -1.22
CXXC4-202ENST00000466963 SPRYD7Q5W111 196 aa7.45□□□□□ -1.22
CXXC4-202ENST00000466963 U2SURPO15042 1029 aaKnown RBP7.45□□□□□ -1.22
CXXC4-202ENST00000466963 BMP8BP34820 402 aa7.45□□□□□ -1.22
CXXC4-202ENST00000466963 IREB2P48200 963 aaKnown RBP7.45□□□□□ -1.22
CXXC4-202ENST00000466963 SOX10P56693 466 aa7.45□□□□□ -1.22
CXXC4-202ENST00000466963 SLC4A2P04920 1241 aa7.44□□□□□ -1.22
CXXC4-202ENST00000466963 FXR1P51114 621 aaKnown RBP eCLIP7.44□□□□□ -1.22
CXXC4-202ENST00000466963 RPS8P62241 208 aaKnown RBP7.44□□□□□ -1.22
CXXC4-202ENST00000466963 MYOZ2Q9NPC6 264 aa7.44□□□□□ -1.22
CXXC4-202ENST00000466963 RPAP1Q9BWH6 1393 aaPredicted RBP7.44□□□□□ -1.22
CXXC4-202ENST00000466963 DLG5Q8TDM6 1919 aa7.44□□□□□ -1.22
CXXC4-202ENST00000466963 MYO1BO43795 1136 aa7.44□□□□□ -1.22
CXXC4-202ENST00000466963 TRIM26Q12899 539 aaPredicted RBP7.44□□□□□ -1.22
CXXC4-202ENST00000466963 LRP10Q7Z4F1 713 aa7.44□□□□□ -1.22
CXXC4-202ENST00000466963 ANKLE1Q8NAG6 615 aa7.44□□□□□ -1.22
CXXC4-202ENST00000466963 CCDC191Q8NCU4 936 aa7.44□□□□□ -1.22
CXXC4-202ENST00000466963 ZBED3Q96IU2 234 aaPredicted RBP7.44□□□□□ -1.22
CXXC4-202ENST00000466963 GGA3Q9NZ52 723 aa7.44□□□□□ -1.22
CXXC4-202ENST00000466963 YDJCA8MPS7 323 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 IGSF3O75054 1194 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 IFNL1Q8IU54 200 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 TBC1D16Q8TBP0 767 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 MRIQ9BWK5 157 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 TRMT112Q9UI30 125 aaKnown RBP7.43□□□□□ -1.22
CXXC4-202ENST00000466963 MAPK8IP3Q9UPT6 1336 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 SCARF1Q14162 830 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 FAM109BQ6ICB4 259 aaPredicted RBP7.43□□□□□ -1.22
CXXC4-202ENST00000466963 ZFYVE28Q9HCC9 887 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 DBF4Q9UBU7 674 aaPredicted RBP7.43□□□□□ -1.22
CXXC4-202ENST00000466963 ARAP2Q8WZ64 1704 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 DDX58O95786 925 aaKnown RBP7.43□□□□□ -1.22
CXXC4-202ENST00000466963 PCCAP05165 728 aaPredicted RBP7.43□□□□□ -1.22
CXXC4-202ENST00000466963 GTF2A2P52657 109 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
CXXC4-202ENST00000466963 FKBP1CQ5VVH2 108 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 OTOP1Q7RTM1 612 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 ZBTB38Q8NAP3 1195 aaPredicted RBP7.43□□□□□ -1.22
CXXC4-202ENST00000466963 ZNF333Q96JL9 665 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 TBC1D2Q9BYX2 928 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 EFCC1Q9HA90 598 aa7.43□□□□□ -1.22
CXXC4-202ENST00000466963 PDE8AO60658 829 aa7.42□□□□□ -1.22
CXXC4-202ENST00000466963 ZNF408Q9H9D4 720 aa7.42□□□□□ -1.22
CXXC4-202ENST00000466963 RAD17O75943 681 aa7.42□□□□□ -1.22
CXXC4-202ENST00000466963 SP3Q02447 781 aa7.42□□□□□ -1.22
CXXC4-202ENST00000466963 ANKRD13AQ8IZ07 590 aa7.42□□□□□ -1.22
CXXC4-202ENST00000466963 SLC45A1Q9Y2W3 748 aa7.42□□□□□ -1.22
CXXC4-202ENST00000466963 SUGT1Q9Y2Z0 365 aa7.42□□□□□ -1.22
CXXC4-202ENST00000466963 ARIH1Q9Y4X5 557 aaPredicted RBP7.42□□□□□ -1.22
CXXC4-202ENST00000466963 TNNI2P48788 182 aa7.41□□□□□ -1.22
CXXC4-202ENST00000466963 SLC10A4Q96EP9 437 aa7.41□□□□□ -1.22
CXXC4-202ENST00000466963 WNK4Q96J92 1243 aa7.41□□□□□ -1.22
CXXC4-202ENST00000466963 COL4A1P02462 1669 aa7.41□□□□□ -1.22
CXXC4-202ENST00000466963 PLA2G12BQ9BX93 195 aa7.41□□□□□ -1.22
CXXC4-202ENST00000466963 BSDC1Q9NW68 430 aaPredicted RBP7.41□□□□□ -1.22
CXXC4-202ENST00000466963 C6orf229H3BNL8 230 aa7.41□□□□□ -1.22
CXXC4-202ENST00000466963 U2AF1L5P0DN76 240 aaPredicted RBP7.41□□□□□ -1.22
CXXC4-202ENST00000466963 UBXN2AP68543 259 aa7.41□□□□□ -1.22
CXXC4-202ENST00000466963 U2AF1Q01081 240 aaKnown RBP eCLIP7.41□□□□□ -1.22
CXXC4-202ENST00000466963 SAMD7Q7Z3H4 446 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms