RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 LOC102724428A0A0B4J2F2 783 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 TMEM88BA6NKF7 163 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 J3QW42 95 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 PSAPP07602 524 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 H2AFB1P0C5Y9 115 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 H2AFB2P0C5Z0 115 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 ARID4AP29374 1257 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 SIK1P57059 783 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 KRTAP1-3Q8IUG1 177 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 STIM2Q9P246 746 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 SEPT3Q9UH03 358 aa6.5□□□□□ -1.37
GTF3C3-209ENST00000466862 DLL1O00548 723 aa6.49□□□□□ -1.37
GTF3C3-209ENST00000466862 TM4SF5O14894 197 aa6.49□□□□□ -1.37
GTF3C3-209ENST00000466862 KIF4AO95239 1232 aa6.49□□□□□ -1.37
GTF3C3-209ENST00000466862 ADAMTSL4Q6UY14 1074 aa6.49□□□□□ -1.37
GTF3C3-209ENST00000466862 CCDC82Q8N4S0 544 aa6.49□□□□□ -1.37
GTF3C3-209ENST00000466862 ABTB2Q8N961 1025 aa6.49□□□□□ -1.37
GTF3C3-209ENST00000466862 TRIM33Q9UPN9 1127 aa6.49□□□□□ -1.37
GTF3C3-209ENST00000466862 UBAP1LF5GYI3 381 aa6.48□□□□□ -1.37
GTF3C3-209ENST00000466862 NOS3P29474 1203 aa6.48□□□□□ -1.37
GTF3C3-209ENST00000466862 SCNN1AP37088 669 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 ATP11AP98196 1134 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 PRSS36Q5K4E3 855 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 Q6ZS46 218 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 HELQQ8TDG4 1101 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 GPR152Q8TDT2 470 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 PIK3R5Q8WYR1 880 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 MEGF10Q96KG7 1140 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 FAM13BQ9NYF5 915 aa6.47□□□□□ -1.37
GTF3C3-209ENST00000466862 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 GHRHP01286 108 aa6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 CYP2E1P05181 493 aaPredicted RBP6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 SETDB1Q15047 1291 aa6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 IGF2-ASQ6U949 168 aa6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 ATCAYQ86WG3 371 aa6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 WFDC12Q8WWY7 111 aa6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 SRA1Q9HD15 236 aaKnown RBP6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 USP21Q9UK80 565 aa6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 GTF3C3Q9Y5Q9 886 aa6.46□□□□□ -1.38
GTF3C3-209ENST00000466862 GDF6Q6KF10 455 aaPredicted RBP6.45□□□□□ -1.38
GTF3C3-209ENST00000466862 TMEM63CQ9P1W3 806 aa6.45□□□□□ -1.38
GTF3C3-209ENST00000466862 IREB2P48200 963 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-209ENST00000466862 PDE12Q6L8Q7 609 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-209ENST00000466862 DZIP1LQ8IYY4 767 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-209ENST00000466862 NUDT16Q96DE0 195 aaKnown RBP6.44□□□□□ -1.38
GTF3C3-209ENST00000466862 ABI2Q9NYB9 513 aaPredicted RBP6.44□□□□□ -1.38
GTF3C3-209ENST00000466862 F8W735 103 aaPredicted RBP6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 SSFA2P28290 1259 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 HYAL2Q12891 473 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 PHLDB3Q6NSJ2 640 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 MAP4K3Q8IVH8 894 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 IL22RA1Q8N6P7 574 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 CEP120Q8N960 986 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 GALNT11Q8NCW6 608 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 TP53INP1Q96A56 240 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 KRTAP4-12Q9BQ66 201 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 RBSNQ9H1K0 784 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 RASSF4Q9H2L5 321 aa6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 FNDC3AQ9Y2H6 1198 aaKnown RBP6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.43□□□□□ -1.38
GTF3C3-209ENST00000466862 PDGFAP04085 211 aa6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 NPR3P17342 541 aa6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 MPSTP25325 297 aa6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 XKR5Q6UX68 686 aa6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 CACTIN-AS1Q8N1I8 211 aa6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 CHRDQ9H2X0 955 aa6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 CNTN3Q9P232 1028 aa6.42□□□□□ -1.38
GTF3C3-209ENST00000466862 PPP1R15AO75807 674 aaPredicted RBP6.41□□□□□ -1.38
GTF3C3-209ENST00000466862 WISP1O95388 367 aa6.41□□□□□ -1.38
GTF3C3-209ENST00000466862 EPHA1P21709 976 aa6.41□□□□□ -1.38
GTF3C3-209ENST00000466862 TMEM130Q8N3G9 435 aa6.41□□□□□ -1.38
GTF3C3-209ENST00000466862 EDEM1Q92611 657 aa6.41□□□□□ -1.38
GTF3C3-209ENST00000466862 AKTIPQ9H8T0 292 aa6.41□□□□□ -1.38
GTF3C3-209ENST00000466862 ELP3Q9H9T3 547 aa6.41□□□□□ -1.38
GTF3C3-209ENST00000466862 KANSL3Q9P2N6 904 aa6.41□□□□□ -1.38
GTF3C3-209ENST00000466862 A6NHS1 94 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 NFKBIEO00221 500 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 ACPPP15309 386 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 EIF1AXP47813 144 aaKnown RBP6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 MTMR3Q13615 1198 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 PRR23CQ6ZRP0 262 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 GTF3C2Q8WUA4 911 aaPredicted RBP6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 PBX4Q9BYU1 374 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 MUC3BQ9H195 1237 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 GGNBP2Q9H3C7 697 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 SALL4Q9UJQ4 1053 aa6.4□□□□□ -1.38
GTF3C3-209ENST00000466862 ALX3O95076 343 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 ARTNQ5T4W7 220 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 TTC39BQ5VTQ0 682 aaPredicted RBP6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 CEP135Q66GS9 1140 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 TXNDC11Q6PKC3 985 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 ZNF438Q7Z4V0 828 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 LACRTQ9GZZ8 138 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 ADAM19Q9H013 955 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 PPME1Q9Y570 386 aa6.39□□□□□ -1.39
GTF3C3-209ENST00000466862 CARNS1A5YM72 827 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms