RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 MTFR1LQ9H019 292 aa18.58■□□□□ 0.57
SNED1-208ENST00000466618 RBM27Q9P2N5 1060 aaKnown RBP18.58■□□□□ 0.57
SNED1-208ENST00000466618 CCDC39Q9UFE4 941 aa18.58■□□□□ 0.57
SNED1-208ENST00000466618 SUCLG2Q96I99 432 aa18.58■□□□□ 0.56
SNED1-208ENST00000466618 AFDNP55196 1824 aaKnown RBP18.57■□□□□ 0.56
SNED1-208ENST00000466618 GNAI2P04899 355 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 SLC10A5Q5PT55 438 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 PLA2G12BQ9BX93 195 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 ZBTB7AO95365 584 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 NUCB2P80303 420 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 PKP1Q13835 747 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 ERFEQ4G0M1 354 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 PRR5LQ6MZQ0 368 aa18.57■□□□□ 0.56
SNED1-208ENST00000466618 LRRFIP2Q9Y608 721 aaKnown RBP18.57■□□□□ 0.56
SNED1-208ENST00000466618 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
SNED1-208ENST00000466618 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
SNED1-208ENST00000466618 FOXO4P98177 505 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 LRSAM1Q6UWE0 723 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 MYRIPQ8NFW9 859 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 C1orf115Q9H7X2 142 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 PARP3Q9Y6F1 533 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 ABCC12Q96J65 1359 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 RABL6Q3YEC7 729 aaPredicted RBP18.55■□□□□ 0.56
SNED1-208ENST00000466618 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 SGIP1Q9BQI5 828 aa18.55■□□□□ 0.56
SNED1-208ENST00000466618 NRXN2Q9P2S2 1712 aa18.54■□□□□ 0.56
SNED1-208ENST00000466618 ZNF710Q8N1W2 664 aa18.54■□□□□ 0.56
SNED1-208ENST00000466618 ANKRD44Q8N8A2 993 aa18.54■□□□□ 0.56
SNED1-208ENST00000466618 HCLS1P14317 486 aaPredicted RBP18.54■□□□□ 0.56
SNED1-208ENST00000466618 RIC1Q4ADV7 1423 aa18.54■□□□□ 0.56
SNED1-208ENST00000466618 BICC1Q9H694 974 aaKnown RBP18.54■□□□□ 0.56
SNED1-208ENST00000466618 TMEM63CQ9P1W3 806 aa18.54■□□□□ 0.56
SNED1-208ENST00000466618 PDE8AO60658 829 aa18.53■□□□□ 0.56
SNED1-208ENST00000466618 MTX1Q13505 466 aa18.53■□□□□ 0.56
SNED1-208ENST00000466618 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.56
SNED1-208ENST00000466618 CSF1RP07333 972 aa18.52■□□□□ 0.56
SNED1-208ENST00000466618 GTF2E1P29083 439 aaPredicted RBP18.52■□□□□ 0.56
SNED1-208ENST00000466618 CEP85Q6P2H3 762 aa18.52■□□□□ 0.56
SNED1-208ENST00000466618 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
SNED1-208ENST00000466618 CCDC24Q8N4L8 307 aa18.52■□□□□ 0.56
SNED1-208ENST00000466618 HSP90B1P14625 803 aaKnown RBP18.51■□□□□ 0.55
SNED1-208ENST00000466618 PTGER2P43116 358 aa18.51■□□□□ 0.55
SNED1-208ENST00000466618 SIRT2Q8IXJ6 389 aa18.51■□□□□ 0.55
SNED1-208ENST00000466618 SYCE3A1L190 88 aa18.51■□□□□ 0.55
SNED1-208ENST00000466618 CTSWP56202 376 aa18.51■□□□□ 0.55
SNED1-208ENST00000466618 RABEP1Q15276 862 aa18.51■□□□□ 0.55
SNED1-208ENST00000466618 ANKRD45Q5TZF3 282 aa18.51■□□□□ 0.55
SNED1-208ENST00000466618 C3orf67Q6ZVT6 689 aa18.51■□□□□ 0.55
SNED1-208ENST00000466618 RPAP2Q8IXW5 612 aaPredicted RBP18.51■□□□□ 0.55
SNED1-208ENST00000466618 TTLL11Q8NHH1 800 aa18.51■□□□□ 0.55
SNED1-208ENST00000466618 NSFL1CQ9UNZ2 370 aaKnown RBP18.51■□□□□ 0.55
SNED1-208ENST00000466618 KLRG2A4D1S0 409 aaPredicted RBP18.5■□□□□ 0.55
SNED1-208ENST00000466618 ST5P78524 1137 aa18.5■□□□□ 0.55
SNED1-208ENST00000466618 ATP8B2P98198 1209 aa18.5■□□□□ 0.55
SNED1-208ENST00000466618 ZDHHC9Q9Y397 364 aa18.5■□□□□ 0.55
SNED1-208ENST00000466618 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
SNED1-208ENST00000466618 SF3B3Q15393 1217 aaKnown RBP18.49■□□□□ 0.55
SNED1-208ENST00000466618 LMBR1LQ6UX01 489 aa18.49■□□□□ 0.55
SNED1-208ENST00000466618 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
SNED1-208ENST00000466618 TSC1Q92574 1164 aa18.49■□□□□ 0.55
SNED1-208ENST00000466618 BRIP1Q9BX63 1249 aa18.49■□□□□ 0.55
SNED1-208ENST00000466618 GTPBP4Q9BZE4 634 aaKnown RBP18.49■□□□□ 0.55
SNED1-208ENST00000466618 DDX60Q8IY21 1712 aaKnown RBP18.49■□□□□ 0.55
SNED1-208ENST00000466618 PNMA6EA0A0J9YXQ4 647 aa18.48■□□□□ 0.55
SNED1-208ENST00000466618 NPHP1O15259 732 aa18.48■□□□□ 0.55
SNED1-208ENST00000466618 CDC45O75419 566 aa18.48■□□□□ 0.55
SNED1-208ENST00000466618 GTF2F1P35269 517 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNED1-208ENST00000466618 POLD1P28340 1107 aa18.48■□□□□ 0.55
SNED1-208ENST00000466618 POLA2Q14181 598 aa18.48■□□□□ 0.55
SNED1-208ENST00000466618 CRY2Q49AN0 593 aa18.48■□□□□ 0.55
SNED1-208ENST00000466618 GCC1Q96CN9 775 aa18.48■□□□□ 0.55
SNED1-208ENST00000466618 NLRP3Q96P20 1036 aa18.48■□□□□ 0.55
SNED1-208ENST00000466618 LAMB2P55268 1798 aa18.47■□□□□ 0.55
SNED1-208ENST00000466618 SSH3Q8TE77 659 aa18.47■□□□□ 0.55
SNED1-208ENST00000466618 C10orf71Q711Q0 1435 aa18.47■□□□□ 0.55
SNED1-208ENST00000466618 CBX1P83916 185 aa18.47■□□□□ 0.55
SNED1-208ENST00000466618 ZGPATQ8N5A5 531 aaKnown RBP18.47■□□□□ 0.55
SNED1-208ENST00000466618 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
SNED1-208ENST00000466618 PRIMPOLQ96LW4 560 aa18.47■□□□□ 0.55
SNED1-208ENST00000466618 RTL9Q8NET4 1388 aa18.47■□□□□ 0.55
SNED1-208ENST00000466618 TNRC6CQ9HCJ0 1690 aaKnown RBP18.46■□□□□ 0.55
SNED1-208ENST00000466618 RFX5P48382 616 aaPredicted RBP18.46■□□□□ 0.55
SNED1-208ENST00000466618 ATP2B3Q16720 1220 aa18.46■□□□□ 0.55
SNED1-208ENST00000466618 RNF214Q8ND24 703 aa18.46■□□□□ 0.55
SNED1-208ENST00000466618 GREM2Q9H772 168 aa18.46■□□□□ 0.55
SNED1-208ENST00000466618 CWC22Q9HCG8 908 aaKnown RBP18.46■□□□□ 0.55
SNED1-208ENST00000466618 SRGAP3O43295 1099 aa18.45■□□□□ 0.54
SNED1-208ENST00000466618 KIF20AO95235 890 aa18.45■□□□□ 0.54
SNED1-208ENST00000466618 GSPT1P15170 499 aaKnown RBP18.45■□□□□ 0.54
SNED1-208ENST00000466618 PPP4R3BQ5MIZ7 849 aa18.45■□□□□ 0.54
SNED1-208ENST00000466618 SPON1Q9HCB6 807 aa18.45■□□□□ 0.54
SNED1-208ENST00000466618 CCDC152Q4G0S7 254 aa18.45■□□□□ 0.54
SNED1-208ENST00000466618 HMGN5P82970 282 aaKnown RBP18.44■□□□□ 0.54
SNED1-208ENST00000466618 PDE6BP35913 854 aa18.44■□□□□ 0.54
SNED1-208ENST00000466618 CCDC85AQ96PX6 553 aaPredicted RBP18.44■□□□□ 0.54
SNED1-208ENST00000466618 PTMAP06454 111 aaKnown RBP18.42■□□□□ 0.54
SNED1-208ENST00000466618 ITGA6P23229 1130 aa18.42■□□□□ 0.54
SNED1-208ENST00000466618 PTPN12Q05209 780 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms