RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 SPATA31C1P0DKV0 1188 aa7.95□□□□□ -1.14
LINC00879-204ENST00000466560 MAPK1P28482 360 aa7.95□□□□□ -1.14
LINC00879-204ENST00000466560 MZF1P28698 734 aaPredicted RBP7.95□□□□□ -1.14
LINC00879-204ENST00000466560 GPLD1P80108 840 aa7.95□□□□□ -1.14
LINC00879-204ENST00000466560 TRPM4Q8TD43 1214 aa7.95□□□□□ -1.14
LINC00879-204ENST00000466560 PIK3R5Q8WYR1 880 aa7.95□□□□□ -1.14
LINC00879-204ENST00000466560 TLR7Q9NYK1 1049 aaKnown RBP7.95□□□□□ -1.14
LINC00879-204ENST00000466560 DCTN4Q9UJW0 460 aa7.95□□□□□ -1.14
LINC00879-204ENST00000466560 NDUFB5O43674 189 aa7.94□□□□□ -1.14
LINC00879-204ENST00000466560 MMP20O60882 483 aa7.94□□□□□ -1.14
LINC00879-204ENST00000466560 CHRNA4P43681 627 aa7.94□□□□□ -1.14
LINC00879-204ENST00000466560 TRIM28Q13263 835 aaKnown RBP7.94□□□□□ -1.14
LINC00879-204ENST00000466560 TRAPPC3LQ5T215 181 aa7.94□□□□□ -1.14
LINC00879-204ENST00000466560 CD163Q86VB7 1156 aa7.94□□□□□ -1.14
LINC00879-204ENST00000466560 NUDT16Q96DE0 195 aaKnown RBP7.94□□□□□ -1.14
LINC00879-204ENST00000466560 UBAP1LF5GYI3 381 aa7.93□□□□□ -1.14
LINC00879-204ENST00000466560 PSAPP07602 524 aa7.93□□□□□ -1.14
LINC00879-204ENST00000466560 AFF1P51825 1210 aaKnown RBP7.93□□□□□ -1.14
LINC00879-204ENST00000466560 NRLP54845 237 aa7.93□□□□□ -1.14
LINC00879-204ENST00000466560 PERM1Q5SV97 790 aa7.93□□□□□ -1.14
LINC00879-204ENST00000466560 HFE2Q6ZVN8 426 aa7.93□□□□□ -1.14
LINC00879-204ENST00000466560 LPIN3Q9BQK8 851 aa7.93□□□□□ -1.14
LINC00879-204ENST00000466560 CCDC9Q9Y3X0 531 aaKnown RBP7.93□□□□□ -1.14
LINC00879-204ENST00000466560 PCSK2P16519 638 aa7.92□□□□□ -1.14
LINC00879-204ENST00000466560 PLAURQ03405 335 aa7.92□□□□□ -1.14
LINC00879-204ENST00000466560 ELMSAN1Q6PJG2 1045 aa7.92□□□□□ -1.14
LINC00879-204ENST00000466560 NLRP13Q86W25 1043 aa7.92□□□□□ -1.14
LINC00879-204ENST00000466560 GGNBP2Q9H3C7 697 aa7.92□□□□□ -1.14
LINC00879-204ENST00000466560 FRRS1LQ9P0K9 344 aa7.92□□□□□ -1.14
LINC00879-204ENST00000466560 A6NHS1 94 aa7.91□□□□□ -1.14
LINC00879-204ENST00000466560 APBA3O96018 575 aa7.91□□□□□ -1.14
LINC00879-204ENST00000466560 EIF2AK2P19525 551 aaKnown RBP7.91□□□□□ -1.14
LINC00879-204ENST00000466560 C8orf34Q49A92 452 aa7.91□□□□□ -1.14
LINC00879-204ENST00000466560 TMC1Q8TDI8 760 aa7.91□□□□□ -1.14
LINC00879-204ENST00000466560 RBCK1Q9BYM8 510 aa7.91□□□□□ -1.14
LINC00879-204ENST00000466560 FNDC3AQ9Y2H6 1198 aaKnown RBP7.91□□□□□ -1.14
LINC00879-204ENST00000466560 J3QW42 95 aa7.9□□□□□ -1.14
LINC00879-204ENST00000466560 USP5P45974 858 aa7.9□□□□□ -1.14
LINC00879-204ENST00000466560 BAG6P46379 1132 aa7.9□□□□□ -1.14
LINC00879-204ENST00000466560 GRIK5Q16478 980 aa7.9□□□□□ -1.14
LINC00879-204ENST00000466560 DMRTC2Q8IXT2 367 aaPredicted RBP7.9□□□□□ -1.14
LINC00879-204ENST00000466560 TTC16Q8NEE8 873 aa7.9□□□□□ -1.14
LINC00879-204ENST00000466560 NSUN5Q96P11 429 aaKnown RBP7.9□□□□□ -1.14
LINC00879-204ENST00000466560 CITED4Q96RK1 184 aa7.9□□□□□ -1.14
LINC00879-204ENST00000466560 SMG9Q9H0W8 520 aaKnown RBP7.9□□□□□ -1.14
LINC00879-204ENST00000466560 A0A0A0MRY4 1105 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 SOX18P35713 384 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 SIK1P57059 783 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 RAC1P63000 192 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 GRIK4Q16099 956 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 DNAJC14Q6Y2X3 702 aaPredicted RBP7.89□□□□□ -1.15
LINC00879-204ENST00000466560 TMC7Q7Z402 723 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 ZSCAN29Q8IWY8 852 aaPredicted RBP7.89□□□□□ -1.15
LINC00879-204ENST00000466560 GJD3Q8N144 294 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 ASB16Q96NS5 453 aa7.89□□□□□ -1.15
LINC00879-204ENST00000466560 GHRHP01286 108 aa7.88□□□□□ -1.15
LINC00879-204ENST00000466560 RPLP1P05386 114 aaKnown RBP7.88□□□□□ -1.15
LINC00879-204ENST00000466560 PDE3BQ13370 1112 aa7.88□□□□□ -1.15
LINC00879-204ENST00000466560 SUZ12Q15022 739 aaKnown RBP7.88□□□□□ -1.15
LINC00879-204ENST00000466560 TTC9Q92623 222 aa7.88□□□□□ -1.15
LINC00879-204ENST00000466560 FAM129BQ96TA1 746 aa7.88□□□□□ -1.15
LINC00879-204ENST00000466560 ANKRD33BA6NCL7 494 aa7.87□□□□□ -1.15
LINC00879-204ENST00000466560 HOXD8P13378 290 aaPredicted RBP7.87□□□□□ -1.15
LINC00879-204ENST00000466560 MSL1Q68DK7 614 aa7.87□□□□□ -1.15
LINC00879-204ENST00000466560 OR13H1Q8NG92 308 aa7.87□□□□□ -1.15
LINC00879-204ENST00000466560 PLD4Q96BZ4 506 aa7.87□□□□□ -1.15
LINC00879-204ENST00000466560 NACC1Q96RE7 527 aa7.87□□□□□ -1.15
LINC00879-204ENST00000466560 NIF3L1Q9GZT8 377 aa7.87□□□□□ -1.15
LINC00879-204ENST00000466560 GPR182O15218 404 aa7.86□□□□□ -1.15
LINC00879-204ENST00000466560 IGHA2P01877 340 aa7.86□□□□□ -1.15
LINC00879-204ENST00000466560 GATA4P43694 442 aa7.86□□□□□ -1.15
LINC00879-204ENST00000466560 EHHADHQ08426 723 aa7.86□□□□□ -1.15
LINC00879-204ENST00000466560 TTC39BQ5VTQ0 682 aaPredicted RBP7.86□□□□□ -1.15
LINC00879-204ENST00000466560 WFDC8Q8IUA0 241 aa7.86□□□□□ -1.15
LINC00879-204ENST00000466560 RBSNQ9H1K0 784 aa7.86□□□□□ -1.15
LINC00879-204ENST00000466560 ELNP15502 786 aa7.85□□□□□ -1.15
LINC00879-204ENST00000466560 COL13A1Q5TAT6 717 aaPredicted RBP7.85□□□□□ -1.15
LINC00879-204ENST00000466560 GDF6Q6KF10 455 aaPredicted RBP7.85□□□□□ -1.15
LINC00879-204ENST00000466560 XKR5Q6UX68 686 aa7.85□□□□□ -1.15
LINC00879-204ENST00000466560 ILDR2Q71H61 639 aa7.85□□□□□ -1.15
LINC00879-204ENST00000466560 ZNF438Q7Z4V0 828 aa7.85□□□□□ -1.15
LINC00879-204ENST00000466560 FMR1NBQ8N0W7 255 aaPredicted RBP7.85□□□□□ -1.15
LINC00879-204ENST00000466560 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
LINC00879-204ENST00000466560 DMRTB1Q96MA1 342 aa7.85□□□□□ -1.15
LINC00879-204ENST00000466560 ELP3Q9H9T3 547 aa7.85□□□□□ -1.15
LINC00879-204ENST00000466560 ABI2Q9NYB9 513 aaPredicted RBP7.85□□□□□ -1.15
LINC00879-204ENST00000466560 FURINP09958 794 aa7.84□□□□□ -1.15
LINC00879-204ENST00000466560 PLCB3Q01970 1234 aa7.84□□□□□ -1.15
LINC00879-204ENST00000466560 HYAL2Q12891 473 aa7.84□□□□□ -1.15
LINC00879-204ENST00000466560 PDE12Q6L8Q7 609 aaKnown RBP7.84□□□□□ -1.15
LINC00879-204ENST00000466560 TMEM63CQ9P1W3 806 aa7.84□□□□□ -1.15
LINC00879-204ENST00000466560 TREHO43280 583 aa7.83□□□□□ -1.16
LINC00879-204ENST00000466560 ADAM23O75077 832 aa7.83□□□□□ -1.16
LINC00879-204ENST00000466560 CYP2E1P05181 493 aaPredicted RBP7.83□□□□□ -1.16
LINC00879-204ENST00000466560 SELPP16109 830 aa7.83□□□□□ -1.16
LINC00879-204ENST00000466560 ERCC3P19447 782 aa7.83□□□□□ -1.16
LINC00879-204ENST00000466560 DOC2BQ14184 412 aa7.83□□□□□ -1.16
LINC00879-204ENST00000466560 DSC3Q14574 896 aa7.83□□□□□ -1.16
LINC00879-204ENST00000466560 SHISA2Q6UWI4 295 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms