RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 SETDB2Q96T68 719 aa12.28□□□□□ -0.44
ATG3-203ENST00000465980 H0YIN7 160 aa12.27□□□□□ -0.45
ATG3-203ENST00000465980 PPP1R18Q6NYC8 613 aa12.27□□□□□ -0.45
ATG3-203ENST00000465980 NBPF10Q6P3W6 841 aaKnown RBP12.27□□□□□ -0.45
ATG3-203ENST00000465980 NBPF15Q8N660 670 aa12.27□□□□□ -0.45
ATG3-203ENST00000465980 TTLL6Q8N841 843 aa12.27□□□□□ -0.45
ATG3-203ENST00000465980 CNBD1Q8NA66 436 aa12.27□□□□□ -0.45
ATG3-203ENST00000465980 ZNF622Q969S3 477 aaKnown RBP eCLIP12.27□□□□□ -0.452e-7■■■■■ 28.3
ATG3-203ENST00000465980 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
ATG3-203ENST00000465980 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
ATG3-203ENST00000465980 TNRC6CQ9HCJ0 1690 aaKnown RBP12.26□□□□□ -0.45
ATG3-203ENST00000465980 FAM177BA6PVY3 158 aa12.26□□□□□ -0.45
ATG3-203ENST00000465980 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
ATG3-203ENST00000465980 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
ATG3-203ENST00000465980 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
ATG3-203ENST00000465980 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
ATG3-203ENST00000465980 NMRK2Q9NPI5 230 aa12.26□□□□□ -0.45
ATG3-203ENST00000465980 ST5P78524 1137 aa12.25□□□□□ -0.45
ATG3-203ENST00000465980 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
ATG3-203ENST00000465980 BRIP1Q9BX63 1249 aa12.25□□□□□ -0.45
ATG3-203ENST00000465980 PRKD2Q9BZL6 878 aa12.25□□□□□ -0.45
ATG3-203ENST00000465980 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.25□□□□□ -0.45
ATG3-203ENST00000465980 ZNF652Q9Y2D9 606 aa12.25□□□□□ -0.45
ATG3-203ENST00000465980 PDE6BP35913 854 aa12.24□□□□□ -0.45
ATG3-203ENST00000465980 EIF4A1P60842 406 aaKnown RBP12.24□□□□□ -0.45
ATG3-203ENST00000465980 NBPF5PQ86XG9 351 aaPredicted RBP12.24□□□□□ -0.45
ATG3-203ENST00000465980 ZNF516Q92618 1163 aa12.24□□□□□ -0.45
ATG3-203ENST00000465980 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
ATG3-203ENST00000465980 NIP7Q9Y221 180 aaKnown RBP eCLIP12.24□□□□□ -0.45
ATG3-203ENST00000465980 RRP7AQ9Y3A4 280 aaKnown RBP12.24□□□□□ -0.45
ATG3-203ENST00000465980 GFRA3O60609 400 aa12.23□□□□□ -0.45
ATG3-203ENST00000465980 MYL6BP14649 208 aa12.23□□□□□ -0.45
ATG3-203ENST00000465980 RIPK4P57078 832 aa12.23□□□□□ -0.45
ATG3-203ENST00000465980 NEUROD2Q15784 382 aa12.23□□□□□ -0.45
ATG3-203ENST00000465980 TSPYL4Q9UJ04 414 aa12.23□□□□□ -0.45
ATG3-203ENST00000465980 NFKBIEO00221 500 aa12.22□□□□□ -0.45
ATG3-203ENST00000465980 C21orf2O43822 256 aa12.22□□□□□ -0.45
ATG3-203ENST00000465980 PRELPP51888 382 aa12.22□□□□□ -0.45
ATG3-203ENST00000465980 HLFQ16534 295 aa12.22□□□□□ -0.45
ATG3-203ENST00000465980 CLEC4GQ6UXB4 293 aa12.22□□□□□ -0.45
ATG3-203ENST00000465980 PRR14Q9BWN1 585 aa12.22□□□□□ -0.45
ATG3-203ENST00000465980 ANKRD36CQ5JPF3 1778 aa12.22□□□□□ -0.45
ATG3-203ENST00000465980 APAF1O14727 1248 aa12.21□□□□□ -0.45
ATG3-203ENST00000465980 HSPA6P17066 643 aa12.21□□□□□ -0.45
ATG3-203ENST00000465980 LMNB1P20700 586 aa12.21□□□□□ -0.45
ATG3-203ENST00000465980 TMPOP42166 694 aaKnown RBP12.21□□□□□ -0.45
ATG3-203ENST00000465980 TTLL7Q6ZT98 887 aa12.21□□□□□ -0.45
ATG3-203ENST00000465980 PCNTO95613 3336 aa12.2□□□□□ -0.46
ATG3-203ENST00000465980 KDM2BQ8NHM5 1336 aa12.2□□□□□ -0.46
ATG3-203ENST00000465980 NRG2O14511 850 aaPredicted RBP12.2□□□□□ -0.46
ATG3-203ENST00000465980 SRGNP10124 158 aa12.2□□□□□ -0.46
ATG3-203ENST00000465980 GPTP24298 496 aa12.2□□□□□ -0.46
ATG3-203ENST00000465980 GGCXP38435 758 aa12.2□□□□□ -0.46
ATG3-203ENST00000465980 PRPF40BQ6NWY9 871 aaKnown RBP12.2□□□□□ -0.46
ATG3-203ENST00000465980 KIF6Q6ZMV9 814 aa12.2□□□□□ -0.46
ATG3-203ENST00000465980 C16orf71Q8IYS4 520 aaPredicted RBP12.2□□□□□ -0.46
ATG3-203ENST00000465980 ZBTB3Q9H5J0 574 aa12.2□□□□□ -0.46
ATG3-203ENST00000465980 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
ATG3-203ENST00000465980 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
ATG3-203ENST00000465980 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
ATG3-203ENST00000465980 GTF2E1P29083 439 aaPredicted RBP12.19□□□□□ -0.46
ATG3-203ENST00000465980 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
ATG3-203ENST00000465980 STYK1Q6J9G0 422 aa12.19□□□□□ -0.46
ATG3-203ENST00000465980 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
ATG3-203ENST00000465980 MASTLQ96GX5 879 aa12.19□□□□□ -0.46
ATG3-203ENST00000465980 RRAGCQ9HB90 399 aa12.19□□□□□ -0.46
ATG3-203ENST00000465980 LAS1LQ9Y4W2 734 aaKnown RBP12.19□□□□□ -0.46
ATG3-203ENST00000465980 WDR90Q96KV7 1748 aa12.19□□□□□ -0.46
ATG3-203ENST00000465980 ABCC12Q96J65 1359 aa12.18□□□□□ -0.46
ATG3-203ENST00000465980 LAMB2P55268 1798 aa12.18□□□□□ -0.46
ATG3-203ENST00000465980 TOMM70O94826 608 aa12.18□□□□□ -0.46
ATG3-203ENST00000465980 ANXA1P04083 346 aa12.18□□□□□ -0.46
ATG3-203ENST00000465980 TPTE2Q6XPS3 522 aa12.18□□□□□ -0.46
ATG3-203ENST00000465980 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
ATG3-203ENST00000465980 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
ATG3-203ENST00000465980 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
ATG3-203ENST00000465980 PROSER3Q2NL68 480 aa12.17□□□□□ -0.46
ATG3-203ENST00000465980 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
ATG3-203ENST00000465980 ZNF521Q96K83 1311 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 ZC3H4Q9UPT8 1303 aaKnown RBP12.16□□□□□ -0.46
ATG3-203ENST00000465980 ERVV-1B6SEH8 477 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 NPR1P16066 1061 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
ATG3-203ENST00000465980 PTGDRQ13258 359 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 KRT24Q2M2I5 525 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 ERFEQ4G0M1 354 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 TAOK3Q9H2K8 898 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 TAF1P21675 1872 aa12.16□□□□□ -0.46
ATG3-203ENST00000465980 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
ATG3-203ENST00000465980 UBN2Q6ZU65 1347 aa12.15□□□□□ -0.46
ATG3-203ENST00000465980 GLTPD2A6NH11 291 aa12.15□□□□□ -0.46
ATG3-203ENST00000465980 DNAJB2P25686 324 aa12.15□□□□□ -0.46
ATG3-203ENST00000465980 COPS2P61201 443 aa12.15□□□□□ -0.46
ATG3-203ENST00000465980 NKX2-3Q8TAU0 364 aa12.15□□□□□ -0.46
ATG3-203ENST00000465980 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
ATG3-203ENST00000465980 KCNV2Q8TDN2 545 aa12.15□□□□□ -0.46
ATG3-203ENST00000465980 NYXQ9GZU5 481 aa12.15□□□□□ -0.46
ATG3-203ENST00000465980 LCE2BO14633 110 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms