RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 SHISA2Q6UWI4 295 aa11.08□□□□□ -0.64
SSB-207ENST00000465871 TPSG1Q9NRR2 321 aa11.08□□□□□ -0.64
SSB-207ENST00000465871 SCNN1AP37088 669 aa11.07□□□□□ -0.64
SSB-207ENST00000465871 FBXO11Q86XK2 927 aa11.07□□□□□ -0.64
SSB-207ENST00000465871 TTC39BQ5VTQ0 682 aaPredicted RBP11.05□□□□□ -0.64
SSB-207ENST00000465871 PDE12Q6L8Q7 609 aaKnown RBP11.05□□□□□ -0.64
SSB-207ENST00000465871 TXNRD3Q86VQ6 643 aa11.05□□□□□ -0.64
SSB-207ENST00000465871 ATCAYQ86WG3 371 aa11.05□□□□□ -0.64
SSB-207ENST00000465871 NUDT16Q96DE0 195 aaKnown RBP11.05□□□□□ -0.64
SSB-207ENST00000465871 ABI2Q9NYB9 513 aaPredicted RBP11.05□□□□□ -0.64
SSB-207ENST00000465871 HYAL2Q12891 473 aa11.04□□□□□ -0.64
SSB-207ENST00000465871 RSPO4Q2I0M5 234 aaPredicted RBP11.04□□□□□ -0.64
SSB-207ENST00000465871 GDF6Q6KF10 455 aaPredicted RBP11.04□□□□□ -0.64
SSB-207ENST00000465871 GTF3C2Q8WUA4 911 aaPredicted RBP11.04□□□□□ -0.64
SSB-207ENST00000465871 USP21Q9UK80 565 aa11.04□□□□□ -0.64
SSB-207ENST00000465871 RPLP1P05386 114 aaKnown RBP11.03□□□□□ -0.64
SSB-207ENST00000465871 NKAPLQ5M9Q1 402 aa11.03□□□□□ -0.64
SSB-207ENST00000465871 COL13A1Q5TAT6 717 aaPredicted RBP11.03□□□□□ -0.64
SSB-207ENST00000465871 SEMA6BQ9H3T3 888 aa11.03□□□□□ -0.64
SSB-207ENST00000465871 DEAF1O75398 565 aaPredicted RBP11.02□□□□□ -0.65
SSB-207ENST00000465871 MPSTP25325 297 aa11.02□□□□□ -0.65
SSB-207ENST00000465871 NOM1Q5C9Z4 860 aaKnown RBP11.02□□□□□ -0.65
SSB-207ENST00000465871 EDEM1Q92611 657 aa11.02□□□□□ -0.65
SSB-207ENST00000465871 KIF4AO95239 1232 aa11.01□□□□□ -0.65
SSB-207ENST00000465871 ZNF438Q7Z4V0 828 aa11.01□□□□□ -0.65
SSB-207ENST00000465871 CACTIN-AS1Q8N1I8 211 aa11.01□□□□□ -0.65
SSB-207ENST00000465871 SPACA7Q96KW9 195 aa11.01□□□□□ -0.65
SSB-207ENST00000465871 ELP3Q9H9T3 547 aa11.01□□□□□ -0.65
SSB-207ENST00000465871 TMEM63CQ9P1W3 806 aa11.01□□□□□ -0.65
SSB-207ENST00000465871 TRIM33Q9UPN9 1127 aa11.01□□□□□ -0.65
SSB-207ENST00000465871 PCSK2P16519 638 aa11□□□□□ -0.65
SSB-207ENST00000465871 ITGB7P26010 798 aa11□□□□□ -0.65
SSB-207ENST00000465871 EIF1AXP47813 144 aaKnown RBP11□□□□□ -0.65
SSB-207ENST00000465871 DNM1Q05193 864 aaKnown RBP11□□□□□ -0.65
SSB-207ENST00000465871 IL22RA1Q8N6P7 574 aa11□□□□□ -0.65
SSB-207ENST00000465871 SRA1Q9HD15 236 aaKnown RBP11□□□□□ -0.65
SSB-207ENST00000465871 MTMR7Q9Y216 660 aa11□□□□□ -0.65
SSB-207ENST00000465871 PDGFAP04085 211 aa10.99□□□□□ -0.65
SSB-207ENST00000465871 CYP2E1P05181 493 aaPredicted RBP10.99□□□□□ -0.65
SSB-207ENST00000465871 ATP11AP98196 1134 aa10.99□□□□□ -0.65
SSB-207ENST00000465871 PHLDB3Q6NSJ2 640 aa10.99□□□□□ -0.65
SSB-207ENST00000465871 IGF2-ASQ6U949 168 aa10.99□□□□□ -0.65
SSB-207ENST00000465871 CARNS1A5YM72 827 aa10.98□□□□□ -0.65
SSB-207ENST00000465871 DLL1O00548 723 aa10.98□□□□□ -0.65
SSB-207ENST00000465871 DYRK3O43781 588 aa10.98□□□□□ -0.65
SSB-207ENST00000465871 MZF1P28698 734 aaPredicted RBP10.98□□□□□ -0.65
SSB-207ENST00000465871 MTMR3Q13615 1198 aa10.98□□□□□ -0.65
SSB-207ENST00000465871 ALKBH2Q6NS38 261 aa10.98□□□□□ -0.65
SSB-207ENST00000465871 USTQ9Y2C2 406 aa10.98□□□□□ -0.65
SSB-207ENST00000465871 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
SSB-207ENST00000465871 NPR3P17342 541 aa10.97□□□□□ -0.65
SSB-207ENST00000465871 XKR5Q6UX68 686 aa10.97□□□□□ -0.65
SSB-207ENST00000465871 MAP4K3Q8IVH8 894 aa10.97□□□□□ -0.65
SSB-207ENST00000465871 DCAF11Q8TEB1 546 aa10.97□□□□□ -0.65
SSB-207ENST00000465871 MUC3BQ9H195 1237 aa10.97□□□□□ -0.65
SSB-207ENST00000465871 CEP135Q66GS9 1140 aa10.96□□□□□ -0.65
SSB-207ENST00000465871 NCAPG2Q86XI2 1143 aa10.96□□□□□ -0.65
SSB-207ENST00000465871 RASSF4Q9H2L5 321 aa10.96□□□□□ -0.65
SSB-207ENST00000465871 SETDB1Q15047 1291 aa10.95□□□□□ -0.66
SSB-207ENST00000465871 ERICH6Q7L0X2 663 aa10.95□□□□□ -0.66
SSB-207ENST00000465871 TTC16Q8NEE8 873 aa10.95□□□□□ -0.66
SSB-207ENST00000465871 WFDC12Q8WWY7 111 aa10.95□□□□□ -0.66
SSB-207ENST00000465871 SSBP4Q9BWG4 385 aaPredicted RBP10.95□□□□□ -0.66
SSB-207ENST00000465871 GGNBP2Q9H3C7 697 aa10.95□□□□□ -0.66
SSB-207ENST00000465871 CNTN3Q9P232 1028 aa10.95□□□□□ -0.66
SSB-207ENST00000465871 KANSL3Q9P2N6 904 aa10.95□□□□□ -0.66
SSB-207ENST00000465871 PPME1Q9Y570 386 aa10.95□□□□□ -0.66
SSB-207ENST00000465871 FAM13AO94988 1023 aa10.94□□□□□ -0.66
SSB-207ENST00000465871 H2AFB1P0C5Y9 115 aa10.94□□□□□ -0.66
SSB-207ENST00000465871 H2AFB2P0C5Z0 115 aa10.94□□□□□ -0.66
SSB-207ENST00000465871 SF3B2Q13435 895 aaKnown RBP10.94□□□□□ -0.66
SSB-207ENST00000465871 C8orf34Q49A92 452 aa10.94□□□□□ -0.66
SSB-207ENST00000465871 CEP120Q8N960 986 aa10.94□□□□□ -0.66
SSB-207ENST00000465871 PBX4Q9BYU1 374 aa10.94□□□□□ -0.66
SSB-207ENST00000465871 A6NHS1 94 aa10.93□□□□□ -0.66
SSB-207ENST00000465871 NOS3P29474 1203 aa10.93□□□□□ -0.66
SSB-207ENST00000465871 LACRTQ9GZZ8 138 aa10.93□□□□□ -0.66
SSB-207ENST00000465871 MRPL18Q9H0U6 180 aaKnown RBP10.93□□□□□ -0.66
SSB-207ENST00000465871 POLIQ9UNA4 740 aa10.93□□□□□ -0.66
SSB-207ENST00000465871 IREB2P48200 963 aaKnown RBP10.92□□□□□ -0.66
SSB-207ENST00000465871 B4GALNT3Q6L9W6 998 aa10.92□□□□□ -0.66
SSB-207ENST00000465871 C1orf127Q8N9H9 656 aa10.92□□□□□ -0.66
SSB-207ENST00000465871 TP53INP1Q96A56 240 aa10.92□□□□□ -0.66
SSB-207ENST00000465871 ABL1P00519 1130 aa10.91□□□□□ -0.66
SSB-207ENST00000465871 CES1P23141 567 aa10.91□□□□□ -0.66
SSB-207ENST00000465871 CDC27P30260 824 aa10.91□□□□□ -0.66
SSB-207ENST00000465871 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
SSB-207ENST00000465871 AAMPQ13685 434 aa10.91□□□□□ -0.66
SSB-207ENST00000465871 SALL4Q9UJQ4 1053 aa10.91□□□□□ -0.66
SSB-207ENST00000465871 USP5P45974 858 aa10.9□□□□□ -0.66
SSB-207ENST00000465871 ZNF211Q13398 564 aaPredicted RBP10.9□□□□□ -0.66
SSB-207ENST00000465871 ADAMTSL4Q6UY14 1074 aa10.9□□□□□ -0.66
SSB-207ENST00000465871 CHRDQ9H2X0 955 aa10.9□□□□□ -0.66
SSB-207ENST00000465871 AKTIPQ9H8T0 292 aa10.9□□□□□ -0.66
SSB-207ENST00000465871 LINC01387J3KSC0 135 aa10.89□□□□□ -0.67
SSB-207ENST00000465871 PTPRAP18433 802 aa10.89□□□□□ -0.67
SSB-207ENST00000465871 EHHADHQ08426 723 aa10.89□□□□□ -0.67
SSB-207ENST00000465871 TMEM130Q8N3G9 435 aa10.89□□□□□ -0.67
SSB-207ENST00000465871 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
SSB-207ENST00000465871 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms