RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 UBTFL1P0CB47 393 aaPredicted RBP11.03□□□□□ -0.64
UBA3-208ENST00000465627 AMIGO3Q86WK7 504 aa11.03□□□□□ -0.64
UBA3-208ENST00000465627 SKAP1Q86WV1 359 aa11.03□□□□□ -0.64
UBA3-208ENST00000465627 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
UBA3-208ENST00000465627 SSH3Q8TE77 659 aa11.03□□□□□ -0.64
UBA3-208ENST00000465627 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
UBA3-208ENST00000465627 MCOLN1Q9GZU1 580 aa11.03□□□□□ -0.64
UBA3-208ENST00000465627 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.65
UBA3-208ENST00000465627 RPS6KA4O75676 772 aa11.02□□□□□ -0.65
UBA3-208ENST00000465627 SOX10P56693 466 aa11.02□□□□□ -0.65
UBA3-208ENST00000465627 NEXNQ0ZGT2 675 aa11.02□□□□□ -0.65
UBA3-208ENST00000465627 RABL6Q3YEC7 729 aaPredicted RBP11.02□□□□□ -0.65
UBA3-208ENST00000465627 HABP4Q5JVS0 413 aaKnown RBP11.02□□□□□ -0.65
UBA3-208ENST00000465627 SLC27A3Q5K4L6 730 aa11.02□□□□□ -0.65
UBA3-208ENST00000465627 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
UBA3-208ENST00000465627 SUCLG2Q96I99 432 aa11.02□□□□□ -0.65
UBA3-208ENST00000465627 CCNL1Q9UK58 526 aaPredicted RBP11.02□□□□□ -0.65
UBA3-208ENST00000465627 BRCA1P38398 1863 aaKnown RBP11.02□□□□□ -0.65
UBA3-208ENST00000465627 NUCB1Q02818 461 aa11.01□□□□□ -0.65
UBA3-208ENST00000465627 EPHA10Q5JZY3 1008 aa11.01□□□□□ -0.65
UBA3-208ENST00000465627 KIF6Q6ZMV9 814 aa11.01□□□□□ -0.65
UBA3-208ENST00000465627 DZIP3Q86Y13 1208 aaKnown RBP11.01□□□□□ -0.65
UBA3-208ENST00000465627 GCC1Q96CN9 775 aa11.01□□□□□ -0.65
UBA3-208ENST00000465627 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
UBA3-208ENST00000465627 UBN2Q6ZU65 1347 aa11□□□□□ -0.65
UBA3-208ENST00000465627 KIF13BQ9NQT8 1826 aa11□□□□□ -0.65
UBA3-208ENST00000465627 PDE4AP27815 886 aa11□□□□□ -0.65
UBA3-208ENST00000465627 NLRP10Q86W26 655 aa11□□□□□ -0.65
UBA3-208ENST00000465627 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
UBA3-208ENST00000465627 CWC25Q9NXE8 425 aaPredicted RBP11□□□□□ -0.65
UBA3-208ENST00000465627 C9orf78Q9NZ63 289 aaPredicted RBP11□□□□□ -0.65
UBA3-208ENST00000465627 RNF181Q9P0P0 153 aa11□□□□□ -0.65
UBA3-208ENST00000465627 TBC1D2BQ9UPU7 963 aa11□□□□□ -0.65
UBA3-208ENST00000465627 LAMB2P55268 1798 aa11□□□□□ -0.65
UBA3-208ENST00000465627 ARFGEF1Q9Y6D6 1849 aa10.99□□□□□ -0.65
UBA3-208ENST00000465627 FOXO4P98177 505 aa10.99□□□□□ -0.65
UBA3-208ENST00000465627 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
UBA3-208ENST00000465627 PPP1R42Q7Z4L9 355 aa10.99□□□□□ -0.65
UBA3-208ENST00000465627 BICC1Q9H694 974 aaKnown RBP10.99□□□□□ -0.65
UBA3-208ENST00000465627 NOP58Q9Y2X3 529 aaKnown RBP10.99□□□□□ -0.65
UBA3-208ENST00000465627 DDX60Q8IY21 1712 aaKnown RBP10.99□□□□□ -0.65
UBA3-208ENST00000465627 PITPNM2Q9BZ72 1349 aa10.98□□□□□ -0.65
UBA3-208ENST00000465627 A0A087WZG4 1122 aa10.98□□□□□ -0.65
UBA3-208ENST00000465627 PCCAP05165 728 aaPredicted RBP10.98□□□□□ -0.65
UBA3-208ENST00000465627 EMP3P54852 163 aa10.98□□□□□ -0.65
UBA3-208ENST00000465627 CLEC4GQ6UXB4 293 aa10.98□□□□□ -0.65
UBA3-208ENST00000465627 UBE3BQ7Z3V4 1068 aa10.98□□□□□ -0.65
UBA3-208ENST00000465627 PLA2G12BQ9BX93 195 aa10.98□□□□□ -0.65
UBA3-208ENST00000465627 MYH3P11055 1940 aa10.98□□□□□ -0.65
UBA3-208ENST00000465627 CDHR2Q9BYE9 1310 aa10.98□□□□□ -0.65
UBA3-208ENST00000465627 SZT2Q5T011 3432 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 A0A0G2JLW4 131 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 HMMRO75330 724 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
UBA3-208ENST00000465627 RFX5P48382 616 aaPredicted RBP10.97□□□□□ -0.65
UBA3-208ENST00000465627 DPY19L2Q6NUT2 758 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 CHD1LQ86WJ1 897 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 NARFQ9UHQ1 456 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 TSKSQ9UJT2 592 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 HDAC5Q9UQL6 1122 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 BOLA1Q9Y3E2 137 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 ZNF330Q9Y3S2 320 aaPredicted RBP10.97□□□□□ -0.65
UBA3-208ENST00000465627 SALL3Q9BXA9 1300 aa10.97□□□□□ -0.65
UBA3-208ENST00000465627 ZBTB38Q8NAP3 1195 aaPredicted RBP10.96□□□□□ -0.65
UBA3-208ENST00000465627 JARID2Q92833 1246 aaPredicted RBP10.96□□□□□ -0.65
UBA3-208ENST00000465627 GNPATO15228 680 aa10.95□□□□□ -0.66
UBA3-208ENST00000465627 SRGAP3O43295 1099 aa10.95□□□□□ -0.66
UBA3-208ENST00000465627 CSF1RP07333 972 aa10.95□□□□□ -0.66
UBA3-208ENST00000465627 FXR1P51114 621 aaKnown RBP eCLIP10.95□□□□□ -0.66
UBA3-208ENST00000465627 SYNE4Q8N205 404 aa10.95□□□□□ -0.66
UBA3-208ENST00000465627 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
UBA3-208ENST00000465627 RTCBQ9Y3I0 505 aaKnown RBP10.95□□□□□ -0.66
UBA3-208ENST00000465627 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
UBA3-208ENST00000465627 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
UBA3-208ENST00000465627 POTECB2RU33 542 aa10.94□□□□□ -0.66
UBA3-208ENST00000465627 NTSR2O95665 410 aa10.94□□□□□ -0.66
UBA3-208ENST00000465627 GPTP24298 496 aa10.94□□□□□ -0.66
UBA3-208ENST00000465627 SUSD4Q5VX71 490 aa10.94□□□□□ -0.66
UBA3-208ENST00000465627 COPRSQ9NQ92 184 aa10.94□□□□□ -0.66
UBA3-208ENST00000465627 SRP68Q9UHB9 627 aaKnown RBP10.94□□□□□ -0.66
UBA3-208ENST00000465627 SSFA2P28290 1259 aa10.93□□□□□ -0.66
UBA3-208ENST00000465627 PTPN12Q05209 780 aaKnown RBP10.93□□□□□ -0.66
UBA3-208ENST00000465627 PARP10Q53GL7 1025 aa10.93□□□□□ -0.66
UBA3-208ENST00000465627 ANKRD45Q5TZF3 282 aa10.93□□□□□ -0.66
UBA3-208ENST00000465627 SLC17A8Q8NDX2 589 aa10.93□□□□□ -0.66
UBA3-208ENST00000465627 FAM89AQ96GI7 184 aa10.93□□□□□ -0.66
UBA3-208ENST00000465627 LNPKQ9C0E8 428 aa10.93□□□□□ -0.66
UBA3-208ENST00000465627 EXOC6BQ9Y2D4 811 aa10.93□□□□□ -0.66
UBA3-208ENST00000465627 COL6A3P12111 3177 aa10.93□□□□□ -0.66
UBA3-208ENST00000465627 LTBP1Q14766 1721 aa10.92□□□□□ -0.66
UBA3-208ENST00000465627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.92□□□□□ -0.66
UBA3-208ENST00000465627 RAB11FIP3O75154 756 aa10.92□□□□□ -0.66
UBA3-208ENST00000465627 TBC1D9BQ66K14 1250 aa10.92□□□□□ -0.66
UBA3-208ENST00000465627 LMBR1LQ6UX01 489 aa10.92□□□□□ -0.66
UBA3-208ENST00000465627 SPNS2Q8IVW8 549 aa10.92□□□□□ -0.66
UBA3-208ENST00000465627 MPNDQ8N594 471 aa10.92□□□□□ -0.66
UBA3-208ENST00000465627 AK7Q96M32 723 aa10.92□□□□□ -0.66
UBA3-208ENST00000465627 ZNF652Q9Y2D9 606 aa10.92□□□□□ -0.66
UBA3-208ENST00000465627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.92□□□□□ -0.66
UBA3-208ENST00000465627 SMARCA5O60264 1052 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms