RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 ECE2O60344 883 aa26.82■■□□□ 1.88
CSPG5-204ENST00000465441 G2E3Q7L622 706 aa26.82■■□□□ 1.88
CSPG5-204ENST00000465441 MICALL2Q8IY33 904 aa26.82■■□□□ 1.88
CSPG5-204ENST00000465441 AIDAQ96BJ3 306 aa26.82■■□□□ 1.88
CSPG5-204ENST00000465441 MRS2Q9HD23 443 aa26.82■■□□□ 1.88
CSPG5-204ENST00000465441 NCBP3Q53F19 620 aaKnown RBP26.81■■□□□ 1.88
CSPG5-204ENST00000465441 ANKIB1Q9P2G1 1089 aa26.81■■□□□ 1.88
CSPG5-204ENST00000465441 TLL2Q9Y6L7 1015 aa26.81■■□□□ 1.88
CSPG5-204ENST00000465441 CAPN15O75808 1086 aa26.8■■□□□ 1.88
CSPG5-204ENST00000465441 SLC4A2P04920 1241 aa26.8■■□□□ 1.88
CSPG5-204ENST00000465441 CTCFP49711 727 aaPredicted RBP26.8■■□□□ 1.88
CSPG5-204ENST00000465441 SAMD7Q7Z3H4 446 aa26.8■■□□□ 1.88
CSPG5-204ENST00000465441 IL16Q14005 1332 aa26.8■■□□□ 1.88
CSPG5-204ENST00000465441 CELF2O95319 508 aaKnown RBP26.79■■□□□ 1.88
CSPG5-204ENST00000465441 CYP4F22Q6NT55 531 aa26.79■■□□□ 1.88
CSPG5-204ENST00000465441 PAXIP1Q6ZW49 1069 aaPredicted RBP26.79■■□□□ 1.88
CSPG5-204ENST00000465441 CDC37L1Q7L3B6 337 aa26.79■■□□□ 1.88
CSPG5-204ENST00000465441 CAPNS2Q96L46 248 aa26.79■■□□□ 1.88
CSPG5-204ENST00000465441 PRDM10Q9NQV6 1147 aa26.79■■□□□ 1.88
CSPG5-204ENST00000465441 GGA1Q9UJY5 639 aa26.79■■□□□ 1.88
CSPG5-204ENST00000465441 TRPM7Q96QT4 1865 aa26.79■■□□□ 1.88
CSPG5-204ENST00000465441 ZNF316A6NFI3 1004 aaPredicted RBP26.78■■□□□ 1.88
CSPG5-204ENST00000465441 ANP32CO43423 234 aa26.78■■□□□ 1.88
CSPG5-204ENST00000465441 UFL1O94874 794 aa26.78■■□□□ 1.88
CSPG5-204ENST00000465441 NEXNQ0ZGT2 675 aa26.78■■□□□ 1.88
CSPG5-204ENST00000465441 CWF19L2Q2TBE0 894 aaKnown RBP26.78■■□□□ 1.88
CSPG5-204ENST00000465441 ANKRD18AQ8IVF6 992 aa26.78■■□□□ 1.88
CSPG5-204ENST00000465441 SALL2Q9Y467 1007 aaPredicted RBP26.78■■□□□ 1.88
CSPG5-204ENST00000465441 RTL9Q8NET4 1388 aa26.78■■□□□ 1.88
CSPG5-204ENST00000465441 ECE1P42892 770 aa26.77■■□□□ 1.88
CSPG5-204ENST00000465441 MAP2K1Q02750 393 aaPredicted RBP26.77■■□□□ 1.88
CSPG5-204ENST00000465441 TTLL11Q8NHH1 800 aa26.77■■□□□ 1.88
CSPG5-204ENST00000465441 G3V3G9 751 aa26.76■■□□□ 1.87
CSPG5-204ENST00000465441 VIL1P09327 827 aaKnown RBP26.76■■□□□ 1.87
CSPG5-204ENST00000465441 RPS12P25398 132 aaKnown RBP26.76■■□□□ 1.87
CSPG5-204ENST00000465441 CTSWP56202 376 aa26.76■■□□□ 1.87
CSPG5-204ENST00000465441 GRM1Q13255 1194 aa26.76■■□□□ 1.87
CSPG5-204ENST00000465441 TBC1D10BQ4KMP7 808 aaPredicted RBP26.76■■□□□ 1.87
CSPG5-204ENST00000465441 RBM26Q5T8P6 1007 aaKnown RBP26.76■■□□□ 1.87
CSPG5-204ENST00000465441 DCAF8Q5TAQ9 597 aa26.76■■□□□ 1.87
CSPG5-204ENST00000465441 USP48Q86UV5 1035 aa26.76■■□□□ 1.87
CSPG5-204ENST00000465441 NEURL1BA8MQ27 555 aa26.75■■□□□ 1.87
CSPG5-204ENST00000465441 EGFRP00533 1210 aa26.75■■□□□ 1.87
CSPG5-204ENST00000465441 LBX1P52954 281 aa26.75■■□□□ 1.87
CSPG5-204ENST00000465441 SAPCD2Q86UD0 394 aa26.75■■□□□ 1.87
CSPG5-204ENST00000465441 H7C1W4 665 aa26.74■■□□□ 1.87
CSPG5-204ENST00000465441 ZNF408Q9H9D4 720 aa26.74■■□□□ 1.87
CSPG5-204ENST00000465441 ATP2B4P23634 1241 aa26.73■■□□□ 1.87
CSPG5-204ENST00000465441 DLK2Q6UY11 383 aa26.73■■□□□ 1.87
CSPG5-204ENST00000465441 WDR63Q8IWG1 891 aa26.73■■□□□ 1.87
CSPG5-204ENST00000465441 CDC5LQ99459 802 aaKnown RBP26.73■■□□□ 1.87
CSPG5-204ENST00000465441 GREM2Q9H772 168 aa26.73■■□□□ 1.87
CSPG5-204ENST00000465441 XDHP47989 1333 aa26.72■■□□□ 1.87
CSPG5-204ENST00000465441 VAMP4O75379 141 aa26.72■■□□□ 1.87
CSPG5-204ENST00000465441 FLIIQ13045 1269 aa26.72■■□□□ 1.87
CSPG5-204ENST00000465441 FANCIQ9NVI1 1328 aa26.71■■□□□ 1.87
CSPG5-204ENST00000465441 WTIPA6NIX2 430 aaPredicted RBP26.71■■□□□ 1.87
CSPG5-204ENST00000465441 AOC2O75106 756 aa26.71■■□□□ 1.87
CSPG5-204ENST00000465441 HSPA8P11142 646 aaKnown RBP26.71■■□□□ 1.87
CSPG5-204ENST00000465441 BSDC1Q9NW68 430 aaPredicted RBP26.71■■□□□ 1.87
CSPG5-204ENST00000465441 MINPP1Q9UNW1 487 aa26.71■■□□□ 1.87
CSPG5-204ENST00000465441 UBE3BQ7Z3V4 1068 aa26.7■■□□□ 1.86
CSPG5-204ENST00000465441 MAP2K2P36507 400 aa26.69■■□□□ 1.86
CSPG5-204ENST00000465441 EXOSC9Q06265 439 aaKnown RBP26.69■■□□□ 1.86
CSPG5-204ENST00000465441 GCKRQ14397 625 aa26.69■■□□□ 1.86
CSPG5-204ENST00000465441 HHIPL1Q96JK4 782 aa26.69■■□□□ 1.86
CSPG5-204ENST00000465441 SCN9AQ15858 1988 aa26.69■■□□□ 1.86
CSPG5-204ENST00000465441 FKBP5Q13451 457 aaPredicted RBP26.68■■□□□ 1.86
CSPG5-204ENST00000465441 KRT26Q7Z3Y9 468 aa26.68■■□□□ 1.86
CSPG5-204ENST00000465441 DNAAF4Q8WXU2 420 aa26.68■■□□□ 1.86
CSPG5-204ENST00000465441 DCPSQ96C86 337 aaKnown RBP26.68■■□□□ 1.86
CSPG5-204ENST00000465441 KIF4BQ2VIQ3 1234 aa26.67■■□□□ 1.86
CSPG5-204ENST00000465441 RSBN1LQ6PCB5 846 aaPredicted RBP26.67■■□□□ 1.86
CSPG5-204ENST00000465441 PODNQ7Z5L7 613 aa26.67■■□□□ 1.86
CSPG5-204ENST00000465441 PLA2G12BQ9BX93 195 aa26.67■■□□□ 1.86
CSPG5-204ENST00000465441 POLR2AP24928 1970 aaKnown RBP26.67■■□□□ 1.86
CSPG5-204ENST00000465441 CASP7P55210 303 aa26.66■■□□□ 1.86
CSPG5-204ENST00000465441 AGBL3Q8NEM8 1001 aa26.66■■□□□ 1.86
CSPG5-204ENST00000465441 BEGAINQ9BUH8 593 aa26.66■■□□□ 1.86
CSPG5-204ENST00000465441 SPINK5Q9NQ38 1064 aaPredicted RBP26.66■■□□□ 1.86
CSPG5-204ENST00000465441 LINS1Q8NG48 757 aa26.65■■□□□ 1.86
CSPG5-204ENST00000465441 ADM5C9JUS6 153 aa26.64■■□□□ 1.86
CSPG5-204ENST00000465441 CSF1RP07333 972 aa26.64■■□□□ 1.86
CSPG5-204ENST00000465441 CCT4P50991 539 aaKnown RBP26.64■■□□□ 1.86
CSPG5-204ENST00000465441 ZNF280AP59817 542 aaPredicted RBP26.64■■□□□ 1.86
CSPG5-204ENST00000465441 GMLQ99445 158 aa26.64■■□□□ 1.86
CSPG5-204ENST00000465441 MYH16Q9H6N6 1097 aa26.64■■□□□ 1.86
CSPG5-204ENST00000465441 ASTN2O75129 1339 aaPredicted RBP26.64■■□□□ 1.85
CSPG5-204ENST00000465441 USP17L3A6NCW0 530 aa26.63■■□□□ 1.85
CSPG5-204ENST00000465441 USP17L4A6NCW7 530 aa26.63■■□□□ 1.85
CSPG5-204ENST00000465441 ITGA6P23229 1130 aa26.63■■□□□ 1.85
CSPG5-204ENST00000465441 IGHMBP2P38935 993 aaKnown RBP26.63■■□□□ 1.85
CSPG5-204ENST00000465441 USP17L1Q7RTZ2 530 aa26.63■■□□□ 1.85
CSPG5-204ENST00000465441 FAM9BQ8IZU0 186 aa26.63■■□□□ 1.85
CSPG5-204ENST00000465441 HUNKP57058 714 aa26.62■■□□□ 1.85
CSPG5-204ENST00000465441 MYH3P11055 1940 aa26.61■■□□□ 1.85
CSPG5-204ENST00000465441 SCARF1Q14162 830 aa26.61■■□□□ 1.85
CSPG5-204ENST00000465441 GBA2Q9HCG7 927 aaPredicted RBP26.61■■□□□ 1.85
CSPG5-204ENST00000465441 GGA3Q9NZ52 723 aa26.61■■□□□ 1.85
CSPG5-204ENST00000465441 LEMD3Q9Y2U8 911 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms