RNA–Protein interactions for RNA: ENST00000465337.2

ATPAF2-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 5

Gene ATPAF2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-203ENST00000465337 RIPOR2Q9Y4F9 1068 aa16.59■□□□□ 0.25
ATPAF2-203ENST00000465337 DDX60Q8IY21 1712 aaKnown RBP16.59■□□□□ 0.25
ATPAF2-203ENST00000465337 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
ATPAF2-203ENST00000465337 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
ATPAF2-203ENST00000465337 TAOK3Q9H2K8 898 aa16.58■□□□□ 0.24
ATPAF2-203ENST00000465337 CEP126Q9P2H0 1117 aa16.58■□□□□ 0.24
ATPAF2-203ENST00000465337 NSFL1CQ9UNZ2 370 aaKnown RBP16.58■□□□□ 0.24
ATPAF2-203ENST00000465337 AKAP2Q9Y2D5 859 aa16.58■□□□□ 0.24
ATPAF2-203ENST00000465337 PNMA6EA0A0J9YXQ4 647 aa16.57■□□□□ 0.24
ATPAF2-203ENST00000465337 UBE4AQ14139 1066 aa16.57■□□□□ 0.24
ATPAF2-203ENST00000465337 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
ATPAF2-203ENST00000465337 RWDD1Q9H446 243 aaPredicted RBP16.57■□□□□ 0.24
ATPAF2-203ENST00000465337 GGA1Q9UJY5 639 aa16.57■□□□□ 0.24
ATPAF2-203ENST00000465337 SURF6O75683 361 aaKnown RBP16.56■□□□□ 0.24
ATPAF2-203ENST00000465337 CHRNDQ07001 517 aa16.56■□□□□ 0.24
ATPAF2-203ENST00000465337 HDAC1Q13547 482 aaPredicted RBP16.56■□□□□ 0.24
ATPAF2-203ENST00000465337 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
ATPAF2-203ENST00000465337 C1orf115Q9H7X2 142 aa16.56■□□□□ 0.24
ATPAF2-203ENST00000465337 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
ATPAF2-203ENST00000465337 PDE8BO95263 885 aa16.55■□□□□ 0.24
ATPAF2-203ENST00000465337 METTL24Q5JXM2 366 aa16.55■□□□□ 0.24
ATPAF2-203ENST00000465337 C15orf52Q6ZUT6 534 aaKnown RBP16.55■□□□□ 0.24
ATPAF2-203ENST00000465337 EXOC6Q8TAG9 804 aa16.55■□□□□ 0.24
ATPAF2-203ENST00000465337 ZC3H12CQ9C0D7 883 aaKnown RBP16.55■□□□□ 0.24
ATPAF2-203ENST00000465337 GPR108Q9NPR9 543 aa16.55■□□□□ 0.24
ATPAF2-203ENST00000465337 DLEC1Q9Y238 1755 aa16.55■□□□□ 0.24
ATPAF2-203ENST00000465337 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
ATPAF2-203ENST00000465337 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATPAF2-203ENST00000465337 LMNB1P20700 586 aa16.54■□□□□ 0.24
ATPAF2-203ENST00000465337 KCNJ4P48050 445 aa16.54■□□□□ 0.24
ATPAF2-203ENST00000465337 OS9Q13438 667 aaPredicted RBP16.54■□□□□ 0.24
ATPAF2-203ENST00000465337 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
ATPAF2-203ENST00000465337 DCTPP1Q9H773 170 aa16.54■□□□□ 0.24
ATPAF2-203ENST00000465337 MYH3P11055 1940 aa16.54■□□□□ 0.24
ATPAF2-203ENST00000465337 KIAA1551Q9HCM1 1747 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 ZNF804BA4D1E1 1349 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 ZC3H4Q9UPT8 1303 aaKnown RBP16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 C6orf229H3BNL8 230 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 GPSM2P81274 684 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 ATG9AQ7Z3C6 839 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 TBC1D16Q8TBP0 767 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
ATPAF2-203ENST00000465337 ZBTB22O15209 634 aa16.52■□□□□ 0.24
ATPAF2-203ENST00000465337 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.24
ATPAF2-203ENST00000465337 PUM3Q15397 648 aaKnown RBP16.52■□□□□ 0.24
ATPAF2-203ENST00000465337 SIRT2Q8IXJ6 389 aa16.52■□□□□ 0.24
ATPAF2-203ENST00000465337 LPIN2Q92539 896 aa16.52■□□□□ 0.24
ATPAF2-203ENST00000465337 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
ATPAF2-203ENST00000465337 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.24
ATPAF2-203ENST00000465337 PCDHB15Q9Y5E8 787 aa16.52■□□□□ 0.24
ATPAF2-203ENST00000465337 UFL1O94874 794 aa16.51■□□□□ 0.23
ATPAF2-203ENST00000465337 KIAA2012Q0VF49 1180 aa16.51■□□□□ 0.23
ATPAF2-203ENST00000465337 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
ATPAF2-203ENST00000465337 KLHDC4Q8TBB5 520 aa16.51■□□□□ 0.23
ATPAF2-203ENST00000465337 PUS3Q9BZE2 481 aaKnown RBP16.51■□□□□ 0.23
ATPAF2-203ENST00000465337 SIL1Q9H173 461 aa16.51■□□□□ 0.23
ATPAF2-203ENST00000465337 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
ATPAF2-203ENST00000465337 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 G3V3G9 751 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 NFKBIEO00221 500 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 SLC5A1P13866 664 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 IARSP41252 1262 aaKnown RBP16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 CAVIN4Q5BKX8 364 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 PODNQ7Z5L7 613 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 VGLL2Q8N8G2 317 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 PA2G4Q9UQ80 394 aaKnown RBP16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
ATPAF2-203ENST00000465337 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
ATPAF2-203ENST00000465337 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
ATPAF2-203ENST00000465337 COA1Q9GZY4 146 aa16.49■□□□□ 0.23
ATPAF2-203ENST00000465337 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
ATPAF2-203ENST00000465337 BRCA1P38398 1863 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-203ENST00000465337 ARFGEF1Q9Y6D6 1849 aa16.48■□□□□ 0.23
ATPAF2-203ENST00000465337 PPIP5K2O43314 1243 aa16.48■□□□□ 0.23
ATPAF2-203ENST00000465337 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
ATPAF2-203ENST00000465337 ZNF804AQ7Z570 1209 aa16.48■□□□□ 0.23
ATPAF2-203ENST00000465337 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
ATPAF2-203ENST00000465337 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
ATPAF2-203ENST00000465337 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
ATPAF2-203ENST00000465337 TAF5LO75529 589 aa16.47■□□□□ 0.23
ATPAF2-203ENST00000465337 FGFR2P21802 821 aa16.47■□□□□ 0.23
ATPAF2-203ENST00000465337 MMP14P50281 582 aa16.47■□□□□ 0.23
ATPAF2-203ENST00000465337 NIM1KQ8IY84 436 aa16.47■□□□□ 0.23
ATPAF2-203ENST00000465337 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
ATPAF2-203ENST00000465337 IGSF3O75054 1194 aa16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 SASH1O94885 1247 aa16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 TFCP2Q12800 502 aa16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 DPY19L2Q6NUT2 758 aa16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 ZNRF3Q9ULT6 936 aa16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 EXOC6BQ9Y2D4 811 aa16.46■□□□□ 0.23
ATPAF2-203ENST00000465337 SEMA3EO15041 775 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms