RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 COG6Q9Y2V7 657 aa16.4■□□□□ 0.22
ERGIC3-212ENST00000465298 NFKBIEO00221 500 aa16.39■□□□□ 0.21
ERGIC3-212ENST00000465298 CIAO1O76071 339 aa16.39■□□□□ 0.21
ERGIC3-212ENST00000465298 IARSP41252 1262 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-212ENST00000465298 KCNJ4P48050 445 aa16.39■□□□□ 0.21
ERGIC3-212ENST00000465298 DPY19L2Q6NUT2 758 aa16.39■□□□□ 0.21
ERGIC3-212ENST00000465298 TNNQ9UQP3 1299 aa16.39■□□□□ 0.21
ERGIC3-212ENST00000465298 SLX4Q8IY92 1834 aa16.39■□□□□ 0.21
ERGIC3-212ENST00000465298 G3V3G9 751 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 C6orf229H3BNL8 230 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 ATP8B2P98198 1209 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 WASHC4Q2M389 1173 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 HSP90AB4PQ58FF6 505 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
ERGIC3-212ENST00000465298 EYA2O00167 538 aa16.37■□□□□ 0.21
ERGIC3-212ENST00000465298 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
ERGIC3-212ENST00000465298 IL15P40933 162 aaPredicted RBP16.37■□□□□ 0.21
ERGIC3-212ENST00000465298 CHRNDQ07001 517 aa16.37■□□□□ 0.21
ERGIC3-212ENST00000465298 KIAA2012Q0VF49 1180 aa16.37■□□□□ 0.21
ERGIC3-212ENST00000465298 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
ERGIC3-212ENST00000465298 LARGE2Q8N3Y3 721 aa16.37■□□□□ 0.21
ERGIC3-212ENST00000465298 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
ERGIC3-212ENST00000465298 UFL1O94874 794 aa16.36■□□□□ 0.21
ERGIC3-212ENST00000465298 GPSM2P81274 684 aa16.36■□□□□ 0.21
ERGIC3-212ENST00000465298 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
ERGIC3-212ENST00000465298 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
ERGIC3-212ENST00000465298 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
ERGIC3-212ENST00000465298 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 PTPN12Q05209 780 aaKnown RBP16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 G3BP1Q13283 466 aaKnown RBP eCLIP16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 SSH3Q8TE77 659 aa16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 ZNF277Q9NRM2 450 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 CEP126Q9P2H0 1117 aa16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 AKAP2Q9Y2D5 859 aa16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 RIPOR2Q9Y4F9 1068 aa16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
ERGIC3-212ENST00000465298 RFX5P48382 616 aaPredicted RBP16.34■□□□□ 0.21
ERGIC3-212ENST00000465298 RASSF7Q02833 373 aa16.34■□□□□ 0.21
ERGIC3-212ENST00000465298 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
ERGIC3-212ENST00000465298 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-212ENST00000465298 KDM2BQ8NHM5 1336 aa16.34■□□□□ 0.21
ERGIC3-212ENST00000465298 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
ERGIC3-212ENST00000465298 PDE8BO95263 885 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 YY1P25490 414 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 CEP85Q6P2H3 762 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 ZNRF3Q9ULT6 936 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 MED23Q9ULK4 1368 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 LRRC37AA6NMS7 1700 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 FER1L6Q2WGJ9 1857 aa16.33■□□□□ 0.2
ERGIC3-212ENST00000465298 IFIT1P09914 478 aaKnown RBP16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 POLA2Q14181 598 aa16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 TNIP1Q15025 636 aa16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 PUM3Q15397 648 aaKnown RBP16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 ZNF804AQ7Z570 1209 aa16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 POLLQ9UGP5 575 aa16.32■□□□□ 0.2
ERGIC3-212ENST00000465298 AOC3Q16853 763 aa16.31■□□□□ 0.2
ERGIC3-212ENST00000465298 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
ERGIC3-212ENST00000465298 CHD4Q14839 1912 aa16.31■□□□□ 0.2
ERGIC3-212ENST00000465298 FZD9O00144 591 aa16.3■□□□□ 0.2
ERGIC3-212ENST00000465298 SURF6O75683 361 aaKnown RBP16.3■□□□□ 0.2
ERGIC3-212ENST00000465298 SLC5A1P13866 664 aa16.3■□□□□ 0.2
ERGIC3-212ENST00000465298 MMP14P50281 582 aa16.3■□□□□ 0.2
ERGIC3-212ENST00000465298 LPIN2Q92539 896 aa16.3■□□□□ 0.2
ERGIC3-212ENST00000465298 CACNA1SQ13698 1873 aa16.3■□□□□ 0.2
ERGIC3-212ENST00000465298 PNMA6EA0A0J9YXQ4 647 aa16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 GLTPD2A6NH11 291 aa16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 RAB11FIP3O75154 756 aa16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 VPS37DQ86XT2 251 aa16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 GPC2Q8N158 579 aa16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 PUS3Q9BZE2 481 aaKnown RBP16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 SIL1Q9H173 461 aa16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 C1orf115Q9H7X2 142 aa16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 GNL3LQ9NVN8 582 aaKnown RBP16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 UTRNP46939 3433 aa16.29■□□□□ 0.2
ERGIC3-212ENST00000465298 TAF5LO75529 589 aa16.28■□□□□ 0.2
ERGIC3-212ENST00000465298 LRRC24Q50LG9 513 aa16.28■□□□□ 0.2
ERGIC3-212ENST00000465298 ATG9AQ7Z3C6 839 aa16.28■□□□□ 0.2
ERGIC3-212ENST00000465298 GPR108Q9NPR9 543 aa16.28■□□□□ 0.2
ERGIC3-212ENST00000465298 IQCA1LA6NCM1 817 aa16.27■□□□□ 0.2
ERGIC3-212ENST00000465298 RIMBP2O15034 1052 aa16.27■□□□□ 0.2
ERGIC3-212ENST00000465298 CIAPIN1Q6FI81 312 aa16.27■□□□□ 0.2
ERGIC3-212ENST00000465298 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
ERGIC3-212ENST00000465298 KLHDC4Q8TBB5 520 aa16.27■□□□□ 0.2
ERGIC3-212ENST00000465298 ECE2O60344 883 aa16.26■□□□□ 0.19
ERGIC3-212ENST00000465298 RPS12P25398 132 aaKnown RBP16.26■□□□□ 0.19
ERGIC3-212ENST00000465298 HIBADHP31937 336 aaKnown RBP16.26■□□□□ 0.19
ERGIC3-212ENST00000465298 ATP2B3Q16720 1220 aa16.26■□□□□ 0.19
ERGIC3-212ENST00000465298 VGLL2Q8N8G2 317 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms