RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 RPS12P25398 132 aaKnown RBP19.86■□□□□ 0.77
HDAC6-214ENST00000465269 SCARF1Q14162 830 aa19.86■□□□□ 0.77
HDAC6-214ENST00000465269 PDIA6Q15084 440 aa19.86■□□□□ 0.77
HDAC6-214ENST00000465269 CELF1Q92879 486 aaKnown RBP19.86■□□□□ 0.77
HDAC6-214ENST00000465269 EIF2S2P20042 333 aaKnown RBP19.85■□□□□ 0.77
HDAC6-214ENST00000465269 TRMT112Q9UI30 125 aaKnown RBP19.85■□□□□ 0.77
HDAC6-214ENST00000465269 REM2Q8IYK8 340 aaPredicted RBP19.84■□□□□ 0.77
HDAC6-214ENST00000465269 CFAP53Q96M91 514 aa19.84■□□□□ 0.77
HDAC6-214ENST00000465269 PCGF6Q9BYE7 350 aa19.84■□□□□ 0.77
HDAC6-214ENST00000465269 PAPPA2Q9BXP8 1791 aa19.84■□□□□ 0.77
HDAC6-214ENST00000465269 AIMP1Q12904 312 aaKnown RBP19.83■□□□□ 0.77
HDAC6-214ENST00000465269 NECTIN2Q92692 538 aa19.83■□□□□ 0.77
HDAC6-214ENST00000465269 NUDCQ9Y266 331 aa19.83■□□□□ 0.77
HDAC6-214ENST00000465269 RANBP2P49792 3224 aaKnown RBP19.83■□□□□ 0.76
HDAC6-214ENST00000465269 DLG5Q8TDM6 1919 aa19.82■□□□□ 0.76
HDAC6-214ENST00000465269 FKTNO75072 461 aa19.81■□□□□ 0.76
HDAC6-214ENST00000465269 VIL1P09327 827 aaKnown RBP19.81■□□□□ 0.76
HDAC6-214ENST00000465269 SH3TC1Q8TE82 1336 aa19.8■□□□□ 0.76
HDAC6-214ENST00000465269 TM4SF4P48230 202 aa19.8■□□□□ 0.76
HDAC6-214ENST00000465269 TTLL12Q14166 644 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-214ENST00000465269 TBC1D16Q8TBP0 767 aa19.8■□□□□ 0.76
HDAC6-214ENST00000465269 PNISRQ8TF01 805 aaKnown RBP19.8■□□□□ 0.76
HDAC6-214ENST00000465269 DDX60Q8IY21 1712 aaKnown RBP19.79■□□□□ 0.76
HDAC6-214ENST00000465269 EN2P19622 333 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-214ENST00000465269 ZNF280AP59817 542 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-214ENST00000465269 RTL5Q5HYW3 569 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-214ENST00000465269 COPS6Q7L5N1 327 aa19.79■□□□□ 0.76
HDAC6-214ENST00000465269 XAGE3Q8WTP9 111 aa19.79■□□□□ 0.76
HDAC6-214ENST00000465269 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-214ENST00000465269 COLQQ9Y215 455 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-214ENST00000465269 FKBP1BP68106 108 aa19.78■□□□□ 0.76
HDAC6-214ENST00000465269 PRKG1Q13976 671 aa19.78■□□□□ 0.76
HDAC6-214ENST00000465269 TMC4Q7Z404 712 aa19.78■□□□□ 0.76
HDAC6-214ENST00000465269 TRIM17Q9Y577 477 aa19.78■□□□□ 0.76
HDAC6-214ENST00000465269 CUL9Q8IWT3 2517 aa19.78■□□□□ 0.76
HDAC6-214ENST00000465269 ERBB4Q15303 1308 aa19.77■□□□□ 0.76
HDAC6-214ENST00000465269 TCIRG1Q13488 830 aa19.77■□□□□ 0.76
HDAC6-214ENST00000465269 FAM89AQ96GI7 184 aa19.77■□□□□ 0.76
HDAC6-214ENST00000465269 NBPF9Q3BBW0 867 aa19.76■□□□□ 0.75
HDAC6-214ENST00000465269 RSBN1LQ6PCB5 846 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-214ENST00000465269 EYA3Q99504 573 aa19.76■□□□□ 0.75
HDAC6-214ENST00000465269 MYOZ2Q9NPC6 264 aa19.76■□□□□ 0.75
HDAC6-214ENST00000465269 FZD1Q9UP38 647 aa19.76■□□□□ 0.75
HDAC6-214ENST00000465269 PPP2R1AP30153 589 aa19.75■□□□□ 0.75
HDAC6-214ENST00000465269 PTPN12Q05209 780 aaKnown RBP19.75■□□□□ 0.75
HDAC6-214ENST00000465269 NOM1Q5C9Z4 860 aaKnown RBP19.75■□□□□ 0.75
HDAC6-214ENST00000465269 OTOP1Q7RTM1 612 aa19.75■□□□□ 0.75
HDAC6-214ENST00000465269 ZC3H12CQ9C0D7 883 aaKnown RBP19.75■□□□□ 0.75
HDAC6-214ENST00000465269 G3V3G9 751 aa19.74■□□□□ 0.75
HDAC6-214ENST00000465269 UFL1O94874 794 aa19.74■□□□□ 0.75
HDAC6-214ENST00000465269 HSP90AB3PQ58FF7 597 aa19.74■□□□□ 0.75
HDAC6-214ENST00000465269 DCAF8Q5TAQ9 597 aa19.74■□□□□ 0.75
HDAC6-214ENST00000465269 GMLQ99445 158 aa19.74■□□□□ 0.75
HDAC6-214ENST00000465269 MXD3Q9BW11 206 aa19.74■□□□□ 0.75
HDAC6-214ENST00000465269 TSPYL4Q9UJ04 414 aa19.74■□□□□ 0.75
HDAC6-214ENST00000465269 ATP5J2-PTCD1G3V325 749 aa19.73■□□□□ 0.75
HDAC6-214ENST00000465269 USP17L8P0C7I0 530 aa19.73■□□□□ 0.75
HDAC6-214ENST00000465269 COL6A3P12111 3177 aa19.73■□□□□ 0.75
HDAC6-214ENST00000465269 WTIPA6NIX2 430 aaPredicted RBP19.72■□□□□ 0.75
HDAC6-214ENST00000465269 CAP1Q01518 475 aa19.72■□□□□ 0.75
HDAC6-214ENST00000465269 SF3B3Q15393 1217 aaKnown RBP19.72■□□□□ 0.75
HDAC6-214ENST00000465269 SEC31BQ9NQW1 1179 aa19.72■□□□□ 0.75
HDAC6-214ENST00000465269 PITPNM2Q9BZ72 1349 aa19.72■□□□□ 0.75
HDAC6-214ENST00000465269 SREBF2Q12772 1141 aa19.71■□□□□ 0.75
HDAC6-214ENST00000465269 AGBL3Q8NEM8 1001 aa19.71■□□□□ 0.75
HDAC6-214ENST00000465269 RPS8P62241 208 aaKnown RBP19.7■□□□□ 0.74
HDAC6-214ENST00000465269 NFE2L2Q16236 605 aa19.7■□□□□ 0.74
HDAC6-214ENST00000465269 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
HDAC6-214ENST00000465269 CFHR5Q9BXR6 569 aa19.7■□□□□ 0.74
HDAC6-214ENST00000465269 ANKIB1Q9P2G1 1089 aa19.7■□□□□ 0.74
HDAC6-214ENST00000465269 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
HDAC6-214ENST00000465269 SASH1O94885 1247 aa19.69■□□□□ 0.74
HDAC6-214ENST00000465269 CD99L2Q8TCZ2 262 aa19.69■□□□□ 0.74
HDAC6-214ENST00000465269 PLEKHF1Q96S99 279 aa19.69■□□□□ 0.74
HDAC6-214ENST00000465269 RBBP6Q7Z6E9 1792 aaKnown RBP19.68■□□□□ 0.74
HDAC6-214ENST00000465269 SPRYD7Q5W111 196 aa19.68■□□□□ 0.74
HDAC6-214ENST00000465269 INTS3Q68E01 1043 aaKnown RBP19.68■□□□□ 0.74
HDAC6-214ENST00000465269 GGA1Q9UJY5 639 aa19.68■□□□□ 0.74
HDAC6-214ENST00000465269 IGF2BP3O00425 579 aaKnown RBP eCLIP19.67■□□□□ 0.74
HDAC6-214ENST00000465269 DLL1O00548 723 aa19.67■□□□□ 0.74
HDAC6-214ENST00000465269 CCDC85AQ96PX6 553 aaPredicted RBP19.67■□□□□ 0.74
HDAC6-214ENST00000465269 PODXL2Q9NZ53 605 aa19.67■□□□□ 0.74
HDAC6-214ENST00000465269 PTPN22Q9Y2R2 807 aa19.67■□□□□ 0.74
HDAC6-214ENST00000465269 PSME4Q14997 1843 aa19.67■□□□□ 0.74
HDAC6-214ENST00000465269 ZNF609O15014 1411 aa19.67■□□□□ 0.74
HDAC6-214ENST00000465269 H0YGN5 161 aa19.66■□□□□ 0.74
HDAC6-214ENST00000465269 IRS4O14654 1257 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-214ENST00000465269 MYCP01106 439 aaPredicted RBP19.66■□□□□ 0.74
HDAC6-214ENST00000465269 IFNL1Q8IU54 200 aa19.66■□□□□ 0.74
HDAC6-214ENST00000465269 CLMNQ96JQ2 1002 aa19.66■□□□□ 0.74
HDAC6-214ENST00000465269 ISCA1Q9BUE6 129 aa19.66■□□□□ 0.74
HDAC6-214ENST00000465269 USP17L3A6NCW0 530 aa19.65■□□□□ 0.74
HDAC6-214ENST00000465269 USP17L4A6NCW7 530 aa19.65■□□□□ 0.74
HDAC6-214ENST00000465269 WNT10BO00744 389 aa19.65■□□□□ 0.74
HDAC6-214ENST00000465269 USP17L1Q7RTZ2 530 aa19.65■□□□□ 0.74
HDAC6-214ENST00000465269 ARMC5Q96C12 935 aa19.65■□□□□ 0.74
HDAC6-214ENST00000465269 CHPF2Q9P2E5 772 aa19.65■□□□□ 0.74
HDAC6-214ENST00000465269 ANGEL1Q9UNK9 670 aaKnown RBP19.65■□□□□ 0.74
HDAC6-214ENST00000465269 NEFMP07197 916 aa19.64■□□□□ 0.73
HDAC6-214ENST00000465269 NF2P35240 595 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms